RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 SEPT2Q15019 361 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 SCAF11Q99590 1463 aaKnown RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 ENOX2Q16206 610 aaKnown RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 SMC5Q8IY18 1101 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 KIAA1107Q9UPP5 1409 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 SAFBQ15424 915 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 VCX3BQ9H321 246 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 CEP104O60308 925 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 PHAXQ9H814 394 aaKnown RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 KANK3Q6NY19 840 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 RLBP1P12271 317 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 ARID4AP29374 1257 aaPredicted RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 DHX37Q8IY37 1157 aaKnown RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 PPP1R9BQ96SB3 815 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 MAP7Q14244 749 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 TSNAXIP1Q2TAA8 658 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 NBPF8Q3BBV2 869 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 HDGFL2Q7Z4V5 671 aaPredicted RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 BSDC1Q9NW68 430 aaPredicted RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 ZHX1Q9UKY1 873 aaPredicted RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 BMP2KLQ5H9B9 411 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 ZMAT2Q96NC0 199 aaKnown RBP7.07□□□□□ -1.28
LINC02397-201ENST00000504409 FAM184BQ9ULE4 1060 aa7.07□□□□□ -1.28
LINC02397-201ENST00000504409 IFI16Q16666 785 aaKnown RBP7.06□□□□□ -1.28
LINC02397-201ENST00000504409 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
LINC02397-201ENST00000504409 BICD2Q8TD16 824 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 TBC1D32Q96NH3 1257 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 NUP62CLQ9H1M0 184 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 PLXNC1O60486 1568 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 CCDC174Q6PII3 467 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC02397-201ENST00000504409 PPFIBP1Q86W92 1011 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 TCP11Q8WWU5 503 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 STX1AQ16623 288 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 ALDH1L2Q3SY69 923 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 MOV10L1Q9BXT6 1211 aaKnown RBP7.06□□□□□ -1.28
LINC02397-201ENST00000504409 CCDC175P0C221 793 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 ATP5DP30049 168 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 CASQ1P31415 396 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 TSC1Q92574 1164 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 TNMDQ9H2S6 317 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC02397-201ENST00000504409 RPRD2Q5VT52 1461 aaKnown RBP7.06□□□□□ -1.28
LINC02397-201ENST00000504409 KIF4BQ2VIQ3 1234 aa7.06□□□□□ -1.28
LINC02397-201ENST00000504409 BRD3Q15059 726 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 SYNE3Q6ZMZ3 975 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 BATF3Q9NR55 127 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 CLIP2Q9UDT6 1046 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 ARHGAP31Q2M1Z3 1444 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 PRPHP41219 470 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 RASSF2P50749 326 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 MPHOSPH6Q99547 160 aaKnown RBP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 IL16Q14005 1332 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 RNF123Q5XPI4 1314 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 GNAI1P63096 354 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 BANK1Q8NDB2 785 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 WASF1Q92558 559 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 CRBNQ96SW2 442 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 FGFR1OPO95684 399 aaKnown RBP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 DYNC1I2Q13409 638 aaKnown RBP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 HSP90AA5PQ58FG0 334 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 PDILTQ8N807 584 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 TSGA10Q9BZW7 698 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 VCX3AQ9NNX9 186 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 NEDD9Q14511 834 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 NBPF6Q5VWK0 638 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 NBPF5PQ86XG9 351 aaPredicted RBP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 FAM200AQ8TCP9 573 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 NBPF4Q96M43 638 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 TACC1O75410 805 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 GBP1P32455 592 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 NOLC1Q14978 699 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 GOLGA1Q92805 767 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 ALS2CR12Q96Q35 445 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 SSH2Q76I76 1423 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 PPP2R5EQ16537 467 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 WDR78Q5VTH9 848 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 FBF1Q8TES7 1133 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 PPFIA1Q13136 1202 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 SNW1Q13573 536 aaKnown RBP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 SH3GL3Q99963 347 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 ZSCAN16Q9H4T2 348 aaPredicted RBP7.05□□□□□ -1.28
LINC02397-201ENST00000504409 CEP131Q9UPN4 1083 aa7.05□□□□□ -1.28
LINC02397-201ENST00000504409 DRP2Q13474 957 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 CEP135Q66GS9 1140 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 SOS1Q07889 1333 aaPredicted RBP7.04□□□□□ -1.28
LINC02397-201ENST00000504409 PRXQ9BXM0 1461 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 LIMCH1Q9UPQ0 1083 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 STAMBPO95630 424 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 NAA25Q14CX7 972 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 WASHC4Q2M389 1173 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 FCHSD1Q86WN1 690 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 GIGYF1O75420 1035 aaPredicted RBP7.04□□□□□ -1.28
LINC02397-201ENST00000504409 WHAMMP3Q1A5X7 153 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 DAAM2Q86T65 1068 aa7.04□□□□□ -1.28
LINC02397-201ENST00000504409 MRPS25P82663 173 aaKnown RBP7.04□□□□□ -1.28
LINC02397-201ENST00000504409 CNTROBQ8N137 903 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms