RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
HOXC6-203ENST00000504315 CHD4Q14839 1912 aa18.47■□□□□ 0.55
HOXC6-203ENST00000504315 TJP1Q07157 1748 aa18.47■□□□□ 0.55
HOXC6-203ENST00000504315 HMOX1P09601 288 aa18.47■□□□□ 0.55
HOXC6-203ENST00000504315 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
HOXC6-203ENST00000504315 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
HOXC6-203ENST00000504315 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
HOXC6-203ENST00000504315 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
HOXC6-203ENST00000504315 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
HOXC6-203ENST00000504315 ARXQ96QS3 562 aa18.45■□□□□ 0.54
HOXC6-203ENST00000504315 C4AP0C0L4 1744 aa18.44■□□□□ 0.54
HOXC6-203ENST00000504315 ITPK1Q13572 414 aa18.44■□□□□ 0.54
HOXC6-203ENST00000504315 FHDC1Q9C0D6 1143 aaPredicted RBP18.44■□□□□ 0.54
HOXC6-203ENST00000504315 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
HOXC6-203ENST00000504315 CABP4P57796 275 aa18.43■□□□□ 0.54
HOXC6-203ENST00000504315 CNGB1Q14028 1251 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-203ENST00000504315 AMIGO3Q86WK7 504 aa18.43■□□□□ 0.54
HOXC6-203ENST00000504315 SLC4A9Q96Q91 983 aa18.43■□□□□ 0.54
HOXC6-203ENST00000504315 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
HOXC6-203ENST00000504315 SSFA2P28290 1259 aa18.42■□□□□ 0.54
HOXC6-203ENST00000504315 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
HOXC6-203ENST00000504315 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
HOXC6-203ENST00000504315 AK7Q96M32 723 aa18.42■□□□□ 0.54
HOXC6-203ENST00000504315 POLD1P28340 1107 aa18.41■□□□□ 0.54
HOXC6-203ENST00000504315 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
HOXC6-203ENST00000504315 CFAP53Q96M91 514 aa18.4■□□□□ 0.54
HOXC6-203ENST00000504315 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
HOXC6-203ENST00000504315 DLG5Q8TDM6 1919 aa18.4■□□□□ 0.54
HOXC6-203ENST00000504315 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
HOXC6-203ENST00000504315 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
HOXC6-203ENST00000504315 CNTNAP4Q9C0A0 1308 aa18.39■□□□□ 0.53
HOXC6-203ENST00000504315 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.53
HOXC6-203ENST00000504315 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
HOXC6-203ENST00000504315 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
HOXC6-203ENST00000504315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
HOXC6-203ENST00000504315 MSH5O43196 834 aa18.37■□□□□ 0.53
HOXC6-203ENST00000504315 RC3H1Q5TC82 1133 aaKnown RBP18.37■□□□□ 0.53
HOXC6-203ENST00000504315 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
HOXC6-203ENST00000504315 GNPATO15228 680 aa18.36■□□□□ 0.53
HOXC6-203ENST00000504315 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
HOXC6-203ENST00000504315 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
HOXC6-203ENST00000504315 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
HOXC6-203ENST00000504315 PHF14O94880 888 aa18.34■□□□□ 0.53
HOXC6-203ENST00000504315 MSL1Q68DK7 614 aa18.34■□□□□ 0.53
HOXC6-203ENST00000504315 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
HOXC6-203ENST00000504315 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
HOXC6-203ENST00000504315 UTRNP46939 3433 aa18.33■□□□□ 0.52
HOXC6-203ENST00000504315 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.52
HOXC6-203ENST00000504315 PTCD1O75127 700 aaKnown RBP18.33■□□□□ 0.52
HOXC6-203ENST00000504315 ADRA2BP18089 450 aa18.33■□□□□ 0.52
HOXC6-203ENST00000504315 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
HOXC6-203ENST00000504315 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
HOXC6-203ENST00000504315 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
HOXC6-203ENST00000504315 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
HOXC6-203ENST00000504315 RPS6KA4O75676 772 aa18.31■□□□□ 0.52
HOXC6-203ENST00000504315 FCHSD2O94868 740 aa18.31■□□□□ 0.52
HOXC6-203ENST00000504315 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
HOXC6-203ENST00000504315 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
HOXC6-203ENST00000504315 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
HOXC6-203ENST00000504315 CRKLP46109 303 aaKnown RBP18.3■□□□□ 0.52
HOXC6-203ENST00000504315 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
HOXC6-203ENST00000504315 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
HOXC6-203ENST00000504315 BRCA1P38398 1863 aaKnown RBP18.29■□□□□ 0.52
HOXC6-203ENST00000504315 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
HOXC6-203ENST00000504315 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
HOXC6-203ENST00000504315 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
HOXC6-203ENST00000504315 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
HOXC6-203ENST00000504315 CD2APQ9Y5K6 639 aa18.28■□□□□ 0.52
HOXC6-203ENST00000504315 RALBP1Q15311 655 aa18.27■□□□□ 0.52
HOXC6-203ENST00000504315 DNAJC10Q8IXB1 793 aa18.27■□□□□ 0.52
HOXC6-203ENST00000504315 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
HOXC6-203ENST00000504315 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
HOXC6-203ENST00000504315 INTS5Q6P9B9 1019 aaKnown RBP18.26■□□□□ 0.51
HOXC6-203ENST00000504315 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
HOXC6-203ENST00000504315 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
HOXC6-203ENST00000504315 CYP19A1P11511 503 aaPredicted RBP18.25■□□□□ 0.51
HOXC6-203ENST00000504315 TEFQ10587 303 aa18.25■□□□□ 0.51
HOXC6-203ENST00000504315 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
HOXC6-203ENST00000504315 GYS1P13807 737 aa18.24■□□□□ 0.51
HOXC6-203ENST00000504315 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
HOXC6-203ENST00000504315 ZNF790Q6PG37 636 aa18.24■□□□□ 0.51
HOXC6-203ENST00000504315 NLGN1Q8N2Q7 840 aa18.24■□□□□ 0.51
HOXC6-203ENST00000504315 CCDC87Q9NVE4 849 aa18.24■□□□□ 0.51
HOXC6-203ENST00000504315 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
HOXC6-203ENST00000504315 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
HOXC6-203ENST00000504315 MMP10P09238 476 aa18.23■□□□□ 0.51
HOXC6-203ENST00000504315 YY1P25490 414 aa18.23■□□□□ 0.51
HOXC6-203ENST00000504315 RFC4P35249 363 aa18.23■□□□□ 0.51
HOXC6-203ENST00000504315 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
HOXC6-203ENST00000504315 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
HOXC6-203ENST00000504315 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
HOXC6-203ENST00000504315 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
HOXC6-203ENST00000504315 SCN7AQ01118 1682 aa18.22■□□□□ 0.51
HOXC6-203ENST00000504315 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
HOXC6-203ENST00000504315 ZNF496Q96IT1 587 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-203ENST00000504315 NRXN2Q9P2S2 1712 aa18.22■□□□□ 0.51
HOXC6-203ENST00000504315 C10orf71Q711Q0 1435 aa18.22■□□□□ 0.51
HOXC6-203ENST00000504315 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
HOXC6-203ENST00000504315 BCORQ6W2J9 1755 aa18.2■□□□□ 0.5
HOXC6-203ENST00000504315 GPR162Q16538 588 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms