RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ASXL1Q8IXJ9 1541 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 PTPRCP08575 1304 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 CWC27Q6UX04 472 aaKnown RBP19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 RIMS2Q9UQ26 1411 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 SERPINC1P01008 464 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 CCDC112Q8NEF3 446 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 RBM10P98175 930 aaKnown RBP19.08■□□□□ 0.65
HMGXB3-202ENST00000503427 TRIM22Q8IYM9 498 aa19.08■□□□□ 0.65
HMGXB3-202ENST00000503427 CWC15Q9P013 229 aaKnown RBP19.08■□□□□ 0.65
HMGXB3-202ENST00000503427 DACH1Q9UI36 760 aa19.08■□□□□ 0.65
HMGXB3-202ENST00000503427 CCDC66A2RUB6 948 aa19.08■□□□□ 0.64
HMGXB3-202ENST00000503427 NUP62CLQ9H1M0 184 aa19.08■□□□□ 0.64
HMGXB3-202ENST00000503427 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.64
HMGXB3-202ENST00000503427 RRP12Q5JTH9 1297 aaKnown RBP19.08■□□□□ 0.64
HMGXB3-202ENST00000503427 CTNNA3Q9UI47 895 aa19.07■□□□□ 0.64
HMGXB3-202ENST00000503427 MAGEC2Q9UBF1 373 aaPredicted RBP19.07■□□□□ 0.64
HMGXB3-202ENST00000503427 ZSCAN30Q86W11 494 aa19.07■□□□□ 0.64
HMGXB3-202ENST00000503427 DISP1Q96F81 1524 aa19.07■□□□□ 0.64
HMGXB3-202ENST00000503427 HYPKQ9NX55 129 aa19.07■□□□□ 0.64
HMGXB3-202ENST00000503427 EXOC6BQ9Y2D4 811 aa19.07■□□□□ 0.64
HMGXB3-202ENST00000503427 TTLL5Q6EMB2 1281 aa19.06■□□□□ 0.64
HMGXB3-202ENST00000503427 ARHGEF12Q9NZN5 1544 aa19.06■□□□□ 0.64
HMGXB3-202ENST00000503427 PTCD1O75127 700 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-202ENST00000503427 GLRX3O76003 335 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-202ENST00000503427 PRM3Q9NNZ6 103 aa19.06■□□□□ 0.64
HMGXB3-202ENST00000503427 MX1P20591 662 aa19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 MPRIPQ6WCQ1 1025 aa19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 DNAAF4Q8WXU2 420 aa19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 ZNF652Q9Y2D9 606 aa19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 FKBP4Q02790 459 aaKnown RBP eCLIP19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 UBAP1LF5GYI3 381 aa19.05■□□□□ 0.64
HMGXB3-202ENST00000503427 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 ANO8Q9HCE9 1232 aaPredicted RBP19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 CBFA2T2O43439 604 aa19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 CT47A1Q5JQC4 288 aaPredicted RBP19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 UQCRHLA0A096LP55 91 aa19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 CDKL5O76039 1030 aa19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 UQCRHP07919 91 aa19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 AKAP2Q9Y2D5 859 aa19.04■□□□□ 0.64
HMGXB3-202ENST00000503427 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 MPNDQ8N594 471 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 TBC1D2Q9BYX2 928 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 PPP1R1BQ9UD71 204 aaPredicted RBP19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 MTMR7Q9Y216 660 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 HSP90AB3PQ58FF7 597 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 IFNL2Q8IZJ0 200 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
HMGXB3-202ENST00000503427 SYCE3A1L190 88 aa19.02■□□□□ 0.64
HMGXB3-202ENST00000503427 TRIM27P14373 513 aa19.02■□□□□ 0.64
HMGXB3-202ENST00000503427 PPFIBP1Q86W92 1011 aa19.02■□□□□ 0.64
HMGXB3-202ENST00000503427 CDK5RAP3Q96JB5 506 aa19.02■□□□□ 0.64
HMGXB3-202ENST00000503427 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.64
HMGXB3-202ENST00000503427 ZNHIT6Q9NWK9 470 aaKnown RBP19.02■□□□□ 0.64
HMGXB3-202ENST00000503427 CCDC69A6NI79 296 aa19.02■□□□□ 0.63
HMGXB3-202ENST00000503427 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.63
HMGXB3-202ENST00000503427 FLIIQ13045 1269 aa19.02■□□□□ 0.63
HMGXB3-202ENST00000503427 MAP3K11Q16584 847 aa19.02■□□□□ 0.63
HMGXB3-202ENST00000503427 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.63
HMGXB3-202ENST00000503427 PATL2C9JE40 543 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-202ENST00000503427 MYD88Q99836 296 aa19.01■□□□□ 0.63
HMGXB3-202ENST00000503427 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
HMGXB3-202ENST00000503427 PLEKHH1Q9ULM0 1364 aa19■□□□□ 0.63
HMGXB3-202ENST00000503427 MYO6Q9UM54 1294 aa19■□□□□ 0.63
HMGXB3-202ENST00000503427 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
HMGXB3-202ENST00000503427 RRP9O43818 475 aaKnown RBP19■□□□□ 0.63
HMGXB3-202ENST00000503427 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
HMGXB3-202ENST00000503427 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 STIM1Q13586 685 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 UPF3BQ9BZI7 483 aaKnown RBP18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 METTL24Q5JXM2 366 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 F6X3S4 739 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 CCAR1Q8IX12 1150 aaKnown RBP18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 TESK2Q96S53 571 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
HMGXB3-202ENST00000503427 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 MSH6P52701 1360 aa18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 NOL7Q9UMY1 257 aaKnown RBP18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 TOM1O60784 492 aa18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 SAMD1Q6SPF0 538 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 SMTNL1A8MU46 457 aa18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 EXOC5O00471 708 aa18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 ODF2Q5BJF6 829 aa18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 SH2B1Q9NRF2 756 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-202ENST00000503427 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
HMGXB3-202ENST00000503427 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
HMGXB3-202ENST00000503427 HSPA2P54652 639 aa18.97■□□□□ 0.63
HMGXB3-202ENST00000503427 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
HMGXB3-202ENST00000503427 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 BMP2KLQ5H9B9 411 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 TNPO1Q92973 898 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 CCDC183Q5T5S1 534 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 SCAND2PQ9GZW5 306 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms