RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
SCLT1-205ENST00000503401 TXNRD1Q16881 649 aa21.8■■□□□ 1.08
SCLT1-205ENST00000503401 FAM9BQ8IZU0 186 aa21.8■■□□□ 1.08
SCLT1-205ENST00000503401 RTF1Q92541 710 aaKnown RBP21.8■■□□□ 1.08
SCLT1-205ENST00000503401 SLC52A2Q9HAB3 445 aa21.8■■□□□ 1.08
SCLT1-205ENST00000503401 MRC1P22897 1456 aa21.79■■□□□ 1.08
SCLT1-205ENST00000503401 TMPOP42166 694 aaKnown RBP21.79■■□□□ 1.08
SCLT1-205ENST00000503401 KCNQ4P56696 695 aa21.79■■□□□ 1.08
SCLT1-205ENST00000503401 NUP188Q5SRE5 1749 aa21.79■■□□□ 1.08
SCLT1-205ENST00000503401 RIPK4P57078 832 aa21.78■■□□□ 1.08
SCLT1-205ENST00000503401 ATG3Q9NT62 314 aa21.78■■□□□ 1.08
SCLT1-205ENST00000503401 PALLDQ8WX93 1383 aa21.78■■□□□ 1.08
SCLT1-205ENST00000503401 SIPA1L3O60292 1781 aaPredicted RBP21.77■■□□□ 1.08
SCLT1-205ENST00000503401 CEMIPQ8WUJ3 1361 aa21.77■■□□□ 1.08
SCLT1-205ENST00000503401 THUMPD2Q9BTF0 503 aaKnown RBP21.77■■□□□ 1.07
SCLT1-205ENST00000503401 APAF1O14727 1248 aa21.76■■□□□ 1.07
SCLT1-205ENST00000503401 TEFQ10587 303 aa21.76■■□□□ 1.07
SCLT1-205ENST00000503401 LRRC4BQ9NT99 713 aa21.76■■□□□ 1.07
SCLT1-205ENST00000503401 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
SCLT1-205ENST00000503401 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
SCLT1-205ENST00000503401 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
SCLT1-205ENST00000503401 SMARCC1Q92922 1105 aaPredicted RBP21.74■■□□□ 1.07
SCLT1-205ENST00000503401 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
SCLT1-205ENST00000503401 PAPPAQ13219 1627 aa21.73■■□□□ 1.07
SCLT1-205ENST00000503401 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
SCLT1-205ENST00000503401 LOC102724428A0A0B4J2F2 783 aa21.7■■□□□ 1.06
SCLT1-205ENST00000503401 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
SCLT1-205ENST00000503401 SIK1P57059 783 aa21.7■■□□□ 1.06
SCLT1-205ENST00000503401 SLC27A3Q5K4L6 730 aa21.7■■□□□ 1.06
SCLT1-205ENST00000503401 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
SCLT1-205ENST00000503401 TAF1LQ8IZX4 1826 aa21.7■■□□□ 1.06
SCLT1-205ENST00000503401 ANO8Q9HCE9 1232 aaPredicted RBP21.69■■□□□ 1.06
SCLT1-205ENST00000503401 SLC4A9Q96Q91 983 aa21.69■■□□□ 1.06
SCLT1-205ENST00000503401 MIS18AQ9NYP9 233 aa21.69■■□□□ 1.06
SCLT1-205ENST00000503401 C5P01031 1676 aa21.68■■□□□ 1.06
SCLT1-205ENST00000503401 BTBD11A6QL63 1104 aa21.68■■□□□ 1.06
SCLT1-205ENST00000503401 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
SCLT1-205ENST00000503401 KCNQ3O43525 872 aa21.67■■□□□ 1.06
SCLT1-205ENST00000503401 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
SCLT1-205ENST00000503401 UBR2Q8IWV8 1755 aa21.67■■□□□ 1.06
SCLT1-205ENST00000503401 KCPQ6ZWJ8 1503 aa21.66■■□□□ 1.06
SCLT1-205ENST00000503401 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
SCLT1-205ENST00000503401 ITPK1Q13572 414 aa21.66■■□□□ 1.06
SCLT1-205ENST00000503401 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
SCLT1-205ENST00000503401 ZNF790Q6PG37 636 aa21.66■■□□□ 1.06
SCLT1-205ENST00000503401 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
SCLT1-205ENST00000503401 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
SCLT1-205ENST00000503401 SRCAPQ6ZRS2 3230 aa21.65■■□□□ 1.06
SCLT1-205ENST00000503401 R3HDM1Q15032 1099 aaKnown RBP21.65■■□□□ 1.06
SCLT1-205ENST00000503401 ZNF827Q17R98 1081 aa21.65■■□□□ 1.06
SCLT1-205ENST00000503401 NBPF14Q5TI25 921 aa21.65■■□□□ 1.06
SCLT1-205ENST00000503401 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
SCLT1-205ENST00000503401 TJP1Q07157 1748 aa21.63■■□□□ 1.05
SCLT1-205ENST00000503401 KDM3BQ7LBC6 1761 aa21.63■■□□□ 1.05
SCLT1-205ENST00000503401 ZNF496Q96IT1 587 aaPredicted RBP21.62■■□□□ 1.05
SCLT1-205ENST00000503401 ZNF831Q5JPB2 1677 aa21.62■■□□□ 1.05
SCLT1-205ENST00000503401 C4BP0C0L5 1744 aa21.62■■□□□ 1.05
SCLT1-205ENST00000503401 TUBGCP6Q96RT7 1819 aa21.62■■□□□ 1.05
SCLT1-205ENST00000503401 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
SCLT1-205ENST00000503401 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
SCLT1-205ENST00000503401 SLC15A2Q16348 729 aa21.61■■□□□ 1.05
SCLT1-205ENST00000503401 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
SCLT1-205ENST00000503401 AKT1S1Q96B36 256 aa21.6■■□□□ 1.05
SCLT1-205ENST00000503401 MYH14Q7Z406 1995 aaKnown RBP21.59■■□□□ 1.05
SCLT1-205ENST00000503401 DNAJC10Q8IXB1 793 aa21.59■■□□□ 1.05
SCLT1-205ENST00000503401 FMNL2Q96PY5 1086 aa21.58■■□□□ 1.05
SCLT1-205ENST00000503401 TSPYL4Q9UJ04 414 aa21.58■■□□□ 1.05
SCLT1-205ENST00000503401 HEG1Q9ULI3 1381 aa21.58■■□□□ 1.05
SCLT1-205ENST00000503401 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
SCLT1-205ENST00000503401 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
SCLT1-205ENST00000503401 PDGFDQ9GZP0 370 aaPredicted RBP21.57■■□□□ 1.04
SCLT1-205ENST00000503401 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
SCLT1-205ENST00000503401 CICQ96RK0 1608 aaPredicted RBP21.57■■□□□ 1.04
SCLT1-205ENST00000503401 PRAMEF22A3QJZ6 481 aa21.56■■□□□ 1.04
SCLT1-205ENST00000503401 AMIGO3Q86WK7 504 aa21.56■■□□□ 1.04
SCLT1-205ENST00000503401 AK7Q96M32 723 aa21.56■■□□□ 1.04
SCLT1-205ENST00000503401 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
SCLT1-205ENST00000503401 CCDC27Q2M243 656 aa21.55■■□□□ 1.04
SCLT1-205ENST00000503401 VSIG10Q8N0Z9 540 aa21.55■■□□□ 1.04
SCLT1-205ENST00000503401 CHL1O00533 1208 aa21.54■■□□□ 1.04
SCLT1-205ENST00000503401 EIF4A1P60842 406 aaKnown RBP21.54■■□□□ 1.04
SCLT1-205ENST00000503401 GNPATO15228 680 aa21.53■■□□□ 1.04
SCLT1-205ENST00000503401 CYP19A1P11511 503 aaPredicted RBP21.53■■□□□ 1.04
SCLT1-205ENST00000503401 CRKLP46109 303 aaKnown RBP21.53■■□□□ 1.04
SCLT1-205ENST00000503401 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
SCLT1-205ENST00000503401 QSER1Q2KHR3 1735 aa21.53■■□□□ 1.04
SCLT1-205ENST00000503401 PNPLA7Q6ZV29 1317 aa21.53■■□□□ 1.04
SCLT1-205ENST00000503401 PHF14O94880 888 aa21.52■■□□□ 1.04
SCLT1-205ENST00000503401 CNTNAP4Q9C0A0 1308 aa21.52■■□□□ 1.04
SCLT1-205ENST00000503401 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
SCLT1-205ENST00000503401 MBIPQ9NS73 344 aa21.51■■□□□ 1.03
SCLT1-205ENST00000503401 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
SCLT1-205ENST00000503401 CASZ1Q86V15 1759 aa21.51■■□□□ 1.03
SCLT1-205ENST00000503401 SNRPA1P09661 255 aaKnown RBP21.51■■□□□ 1.03
SCLT1-205ENST00000503401 ZNF853P0CG23 659 aa21.51■■□□□ 1.03
SCLT1-205ENST00000503401 KRT24Q2M2I5 525 aa21.51■■□□□ 1.03
SCLT1-205ENST00000503401 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
SCLT1-205ENST00000503401 INTS5Q6P9B9 1019 aaKnown RBP21.51■■□□□ 1.03
SCLT1-205ENST00000503401 IFT57Q9NWB7 429 aa21.51■■□□□ 1.03
SCLT1-205ENST00000503401 USP16Q9Y5T5 823 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms