RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 HOXC9P31274 260 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 UPF3BQ9BZI7 483 aaKnown RBP18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 AGLP35573 1532 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 ZMYND15Q9H091 742 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 RIMBP3CA6NJZ7 1639 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 RIMBP3BA6NNM3 1639 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 RIMBP3Q9UFD9 1639 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 NUCB2P80303 420 aa18.35■□□□□ 0.53
SH3TC1-206ENST00000502669 PKP1Q13835 747 aa18.34■□□□□ 0.53
SH3TC1-206ENST00000502669 RRAGDQ9NQL2 400 aaPredicted RBP18.34■□□□□ 0.53
SH3TC1-206ENST00000502669 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
SH3TC1-206ENST00000502669 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
SH3TC1-206ENST00000502669 IL17REQ8NFR9 667 aa18.33■□□□□ 0.53
SH3TC1-206ENST00000502669 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.53
SH3TC1-206ENST00000502669 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.52
SH3TC1-206ENST00000502669 MPRIPQ6WCQ1 1025 aa18.33■□□□□ 0.52
SH3TC1-206ENST00000502669 SRGAP3O43295 1099 aa18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 TBX22Q9Y458 520 aa18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 PTMSP20962 102 aa18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
SH3TC1-206ENST00000502669 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
SH3TC1-206ENST00000502669 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
SH3TC1-206ENST00000502669 GAS2L3Q86XJ1 694 aa18.3■□□□□ 0.52
SH3TC1-206ENST00000502669 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
SH3TC1-206ENST00000502669 OVOS2A0A0J9YW53 1432 aa18.3■□□□□ 0.52
SH3TC1-206ENST00000502669 OVOS2Q6IE36 1432 aa18.3■□□□□ 0.52
SH3TC1-206ENST00000502669 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 C9orf78Q9NZ63 289 aaPredicted RBP18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
SH3TC1-206ENST00000502669 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 CHPF2Q9P2E5 772 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 CRB1P82279 1406 aa18.28■□□□□ 0.52
SH3TC1-206ENST00000502669 KCNJ4P48050 445 aa18.27■□□□□ 0.52
SH3TC1-206ENST00000502669 TECPR2O15040 1411 aa18.27■□□□□ 0.52
SH3TC1-206ENST00000502669 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
SH3TC1-206ENST00000502669 KCNQ3O43525 872 aa18.27■□□□□ 0.52
SH3TC1-206ENST00000502669 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
SH3TC1-206ENST00000502669 SETD1BQ9UPS6 1966 aaKnown RBP18.26■□□□□ 0.51
SH3TC1-206ENST00000502669 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
SH3TC1-206ENST00000502669 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
SH3TC1-206ENST00000502669 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 DTNBO60941 627 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 NBPF6Q5VWK0 638 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 UNC5CLQ8IV45 518 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 TMX3Q96JJ7 454 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 NBPF4Q96M43 638 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 DDIT3P35638 169 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
SH3TC1-206ENST00000502669 RGS12O14924 1447 aa18.24■□□□□ 0.51
SH3TC1-206ENST00000502669 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-206ENST00000502669 CWC22Q9HCG8 908 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-206ENST00000502669 NBPF7P0C2Y1 421 aaPredicted RBP18.24■□□□□ 0.51
SH3TC1-206ENST00000502669 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
SH3TC1-206ENST00000502669 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-206ENST00000502669 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
SH3TC1-206ENST00000502669 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
SH3TC1-206ENST00000502669 USP31Q70CQ4 1352 aa18.23■□□□□ 0.51
SH3TC1-206ENST00000502669 CHMLP26374 656 aa18.23■□□□□ 0.51
SH3TC1-206ENST00000502669 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
SH3TC1-206ENST00000502669 GDPD2Q9HCC8 539 aa18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 ZC3H6P61129 1189 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 PLEKHO1Q53GL0 409 aaPredicted RBP18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
SH3TC1-206ENST00000502669 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
SH3TC1-206ENST00000502669 SPG7Q9UQ90 795 aa18.21■□□□□ 0.51
SH3TC1-206ENST00000502669 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
SH3TC1-206ENST00000502669 ESPNB1AK53 854 aa18.21■□□□□ 0.51
SH3TC1-206ENST00000502669 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
SH3TC1-206ENST00000502669 SIL1Q9H173 461 aa18.21■□□□□ 0.51
SH3TC1-206ENST00000502669 NCOA3Q9Y6Q9 1424 aa18.2■□□□□ 0.5
SH3TC1-206ENST00000502669 IFIT2P09913 472 aaKnown RBP18.2■□□□□ 0.5
SH3TC1-206ENST00000502669 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
SH3TC1-206ENST00000502669 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
SH3TC1-206ENST00000502669 CLASRPQ8N2M8 674 aaKnown RBP18.19■□□□□ 0.5
SH3TC1-206ENST00000502669 CNTROBQ8N137 903 aa18.19■□□□□ 0.5
SH3TC1-206ENST00000502669 KIF1BPQ96EK5 621 aa18.19■□□□□ 0.5
SH3TC1-206ENST00000502669 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
SH3TC1-206ENST00000502669 SYCE3A1L190 88 aa18.18■□□□□ 0.5
SH3TC1-206ENST00000502669 MSNP26038 577 aaKnown RBP18.18■□□□□ 0.5
SH3TC1-206ENST00000502669 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms