RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 PHKG2P15735 406 aa17.73■□□□□ 0.43
LMNA-218ENST00000502357 DNAJC5GQ8N7S2 189 aa17.73■□□□□ 0.43
LMNA-218ENST00000502357 BRCA1P38398 1863 aaKnown RBP17.73■□□□□ 0.43
LMNA-218ENST00000502357 MMP10P09238 476 aa17.71■□□□□ 0.43
LMNA-218ENST00000502357 SPG7Q9UQ90 795 aa17.71■□□□□ 0.43
LMNA-218ENST00000502357 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
LMNA-218ENST00000502357 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
LMNA-218ENST00000502357 MYH14Q7Z406 1995 aaKnown RBP17.7■□□□□ 0.42
LMNA-218ENST00000502357 GNPATO15228 680 aa17.7■□□□□ 0.42
LMNA-218ENST00000502357 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
LMNA-218ENST00000502357 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
LMNA-218ENST00000502357 KCNA3P22001 575 aa17.69■□□□□ 0.42
LMNA-218ENST00000502357 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
LMNA-218ENST00000502357 TGFB2P61812 414 aa17.68■□□□□ 0.42
LMNA-218ENST00000502357 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
LMNA-218ENST00000502357 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
LMNA-218ENST00000502357 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
LMNA-218ENST00000502357 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
LMNA-218ENST00000502357 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
LMNA-218ENST00000502357 GYS1P13807 737 aa17.66■□□□□ 0.42
LMNA-218ENST00000502357 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
LMNA-218ENST00000502357 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
LMNA-218ENST00000502357 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
LMNA-218ENST00000502357 ARFGEF1Q9Y6D6 1849 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
LMNA-218ENST00000502357 TOMM70O94826 608 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 DPEP1P16444 411 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 NMRK2Q9NPI5 230 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
LMNA-218ENST00000502357 RPS6KA4O75676 772 aa17.63■□□□□ 0.41
LMNA-218ENST00000502357 APLP1P51693 650 aa17.63■□□□□ 0.41
LMNA-218ENST00000502357 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
LMNA-218ENST00000502357 CNTNAP4Q9C0A0 1308 aa17.63■□□□□ 0.41
LMNA-218ENST00000502357 ERVV-2B6SEH9 535 aa17.62■□□□□ 0.41
LMNA-218ENST00000502357 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
LMNA-218ENST00000502357 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
LMNA-218ENST00000502357 ADRA2BP18089 450 aa17.61■□□□□ 0.41
LMNA-218ENST00000502357 WDR90Q96KV7 1748 aa17.59■□□□□ 0.41
LMNA-218ENST00000502357 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
LMNA-218ENST00000502357 SBF1O95248 1867 aa17.58■□□□□ 0.41
LMNA-218ENST00000502357 TJP1Q07157 1748 aa17.58■□□□□ 0.41
LMNA-218ENST00000502357 DDR1Q08345 913 aa17.58■□□□□ 0.4
LMNA-218ENST00000502357 ARHGAP27Q6ZUM4 889 aa17.58■□□□□ 0.4
LMNA-218ENST00000502357 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
LMNA-218ENST00000502357 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
LMNA-218ENST00000502357 FCHSD2O94868 740 aa17.56■□□□□ 0.4
LMNA-218ENST00000502357 C9orf131Q5VYM1 1079 aa17.56■□□□□ 0.4
LMNA-218ENST00000502357 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
LMNA-218ENST00000502357 HTRA3P83110 453 aa17.55■□□□□ 0.4
LMNA-218ENST00000502357 FKBP8Q14318 412 aa17.55■□□□□ 0.4
LMNA-218ENST00000502357 JMYQ8N9B5 988 aa17.55■□□□□ 0.4
LMNA-218ENST00000502357 SRP68Q9UHB9 627 aaKnown RBP17.55■□□□□ 0.4
LMNA-218ENST00000502357 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
LMNA-218ENST00000502357 TM4SF1P30408 202 aa17.54■□□□□ 0.4
LMNA-218ENST00000502357 RFC4P35249 363 aa17.54■□□□□ 0.4
LMNA-218ENST00000502357 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
LMNA-218ENST00000502357 PARP3Q9Y6F1 533 aa17.54■□□□□ 0.4
LMNA-218ENST00000502357 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
LMNA-218ENST00000502357 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
LMNA-218ENST00000502357 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
LMNA-218ENST00000502357 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.4
LMNA-218ENST00000502357 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
LMNA-218ENST00000502357 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.4
LMNA-218ENST00000502357 PLEKHO1Q53GL0 409 aaPredicted RBP17.52■□□□□ 0.4
LMNA-218ENST00000502357 PIM2Q9P1W9 311 aa17.52■□□□□ 0.4
LMNA-218ENST00000502357 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
LMNA-218ENST00000502357 PRELPP51888 382 aa17.51■□□□□ 0.39
LMNA-218ENST00000502357 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
LMNA-218ENST00000502357 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
LMNA-218ENST00000502357 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
LMNA-218ENST00000502357 KLRG1Q96E93 195 aa17.51■□□□□ 0.39
LMNA-218ENST00000502357 NRXN2Q9P2S2 1712 aa17.51■□□□□ 0.39
LMNA-218ENST00000502357 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
LMNA-218ENST00000502357 CHRNA5P30532 468 aa17.5■□□□□ 0.39
LMNA-218ENST00000502357 CABP4P57796 275 aa17.5■□□□□ 0.39
LMNA-218ENST00000502357 FSTL1Q12841 308 aa17.5■□□□□ 0.39
LMNA-218ENST00000502357 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
LMNA-218ENST00000502357 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
LMNA-218ENST00000502357 COL13A1Q5TAT6 717 aaPredicted RBP17.49■□□□□ 0.39
LMNA-218ENST00000502357 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
LMNA-218ENST00000502357 PCNTO95613 3336 aa17.48■□□□□ 0.39
LMNA-218ENST00000502357 MTHFSP49914 203 aa17.47■□□□□ 0.39
LMNA-218ENST00000502357 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
LMNA-218ENST00000502357 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
LMNA-218ENST00000502357 DLEC1Q9Y238 1755 aa17.46■□□□□ 0.39
LMNA-218ENST00000502357 IL13P35225 146 aa17.46■□□□□ 0.39
LMNA-218ENST00000502357 PANK3Q9H999 370 aa17.46■□□□□ 0.39
LMNA-218ENST00000502357 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
LMNA-218ENST00000502357 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
LMNA-218ENST00000502357 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.38
LMNA-218ENST00000502357 MRC1P22897 1456 aa17.45■□□□□ 0.38
LMNA-218ENST00000502357 DNAJC10Q8IXB1 793 aa17.45■□□□□ 0.38
LMNA-218ENST00000502357 CYP19A1P11511 503 aaPredicted RBP17.44■□□□□ 0.38
LMNA-218ENST00000502357 RASSF7Q02833 373 aa17.44■□□□□ 0.38
LMNA-218ENST00000502357 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
LMNA-218ENST00000502357 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
LMNA-218ENST00000502357 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
LMNA-218ENST00000502357 VIRMAQ69YN4 1812 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms