RNA–Protein interactions for RNA: ENST00000498559.5

AGAP3-225, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-225ENST00000498559 MTHFSP49914 203 aa24.46■■□□□ 1.51
AGAP3-225ENST00000498559 AMIGO3Q86WK7 504 aa24.46■■□□□ 1.51
AGAP3-225ENST00000498559 LINC00116Q8NCU8 138 aa24.46■■□□□ 1.51
AGAP3-225ENST00000498559 MSH5O43196 834 aa24.45■■□□□ 1.5
AGAP3-225ENST00000498559 AK7Q96M32 723 aa24.45■■□□□ 1.5
AGAP3-225ENST00000498559 ITPK1Q13572 414 aa24.44■■□□□ 1.5
AGAP3-225ENST00000498559 CC2D1BQ5T0F9 858 aaKnown RBP24.44■■□□□ 1.5
AGAP3-225ENST00000498559 SCN11AQ9UI33 1791 aa24.43■■□□□ 1.5
AGAP3-225ENST00000498559 COL5A3P25940 1745 aaPredicted RBP24.43■■□□□ 1.5
AGAP3-225ENST00000498559 COL3A1P02461 1466 aaPredicted RBP24.42■■□□□ 1.5
AGAP3-225ENST00000498559 SSFA2P28290 1259 aa24.41■■□□□ 1.5
AGAP3-225ENST00000498559 ATP6V1AP38606 617 aa24.41■■□□□ 1.5
AGAP3-225ENST00000498559 MSL1Q68DK7 614 aa24.41■■□□□ 1.5
AGAP3-225ENST00000498559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.4■■□□□ 1.5
AGAP3-225ENST00000498559 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
AGAP3-225ENST00000498559 SLC4A9Q96Q91 983 aa24.4■■□□□ 1.5
AGAP3-225ENST00000498559 CICQ96RK0 1608 aaPredicted RBP24.39■■□□□ 1.49
AGAP3-225ENST00000498559 CABP4P57796 275 aa24.38■■□□□ 1.49
AGAP3-225ENST00000498559 KLHL34Q8N239 644 aa24.38■■□□□ 1.49
AGAP3-225ENST00000498559 NLGN2Q8NFZ4 835 aa24.38■■□□□ 1.49
AGAP3-225ENST00000498559 PHF14O94880 888 aa24.37■■□□□ 1.49
AGAP3-225ENST00000498559 SMIM5Q71RC9 77 aa24.37■■□□□ 1.49
AGAP3-225ENST00000498559 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
AGAP3-225ENST00000498559 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
AGAP3-225ENST00000498559 GNPATO15228 680 aa24.36■■□□□ 1.49
AGAP3-225ENST00000498559 DIAPH1O60610 1272 aaKnown RBP24.36■■□□□ 1.49
AGAP3-225ENST00000498559 GPR162Q16538 588 aa24.36■■□□□ 1.49
AGAP3-225ENST00000498559 MRC1P22897 1456 aa24.36■■□□□ 1.49
AGAP3-225ENST00000498559 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
AGAP3-225ENST00000498559 HMOX1P09601 288 aa24.34■■□□□ 1.49
AGAP3-225ENST00000498559 MYH14Q7Z406 1995 aaKnown RBP24.34■■□□□ 1.49
AGAP3-225ENST00000498559 TJP1Q07157 1748 aa24.33■■□□□ 1.49
AGAP3-225ENST00000498559 NFATC2IPQ8NCF5 419 aa24.33■■□□□ 1.49
AGAP3-225ENST00000498559 RBM42Q9BTD8 480 aaKnown RBP24.33■■□□□ 1.49
AGAP3-225ENST00000498559 CNTNAP4Q9C0A0 1308 aa24.33■■□□□ 1.48
AGAP3-225ENST00000498559 RC3H1Q5TC82 1133 aaKnown RBP24.32■■□□□ 1.48
AGAP3-225ENST00000498559 CD2APQ9Y5K6 639 aa24.31■■□□□ 1.48
AGAP3-225ENST00000498559 C1QTNF8P60827 252 aa24.3■■□□□ 1.48
AGAP3-225ENST00000498559 C4AP0C0L4 1744 aa24.3■■□□□ 1.48
AGAP3-225ENST00000498559 MTHFSDQ2M296 383 aaKnown RBP24.28■■□□□ 1.48
AGAP3-225ENST00000498559 SLC52A2Q9HAB3 445 aa24.28■■□□□ 1.48
AGAP3-225ENST00000498559 RTCBQ9Y3I0 505 aaKnown RBP24.28■■□□□ 1.48
AGAP3-225ENST00000498559 RNMTO43148 476 aaKnown RBP24.27■■□□□ 1.48
AGAP3-225ENST00000498559 PTCD1O75127 700 aaKnown RBP24.27■■□□□ 1.48
AGAP3-225ENST00000498559 ADRA2BP18089 450 aa24.27■■□□□ 1.48
AGAP3-225ENST00000498559 LGR6Q9HBX8 967 aa24.27■■□□□ 1.48
AGAP3-225ENST00000498559 CNGB1Q14028 1251 aaPredicted RBP24.26■■□□□ 1.47
AGAP3-225ENST00000498559 PELP1Q8IZL8 1130 aaKnown RBP24.26■■□□□ 1.47
AGAP3-225ENST00000498559 SENP3-EIF4A1A0A087X0R7 540 aa24.25■■□□□ 1.47
AGAP3-225ENST00000498559 RPS6KA4O75676 772 aa24.25■■□□□ 1.47
AGAP3-225ENST00000498559 YBX3P16989 372 aaKnown RBP eCLIP24.25■■□□□ 1.473e-9■■□□□ 12.7
AGAP3-225ENST00000498559 TRAPPC3LQ5T215 181 aa24.25■■□□□ 1.47
AGAP3-225ENST00000498559 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
AGAP3-225ENST00000498559 KIF13BQ9NQT8 1826 aa24.24■■□□□ 1.47
AGAP3-225ENST00000498559 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
AGAP3-225ENST00000498559 ARHGEF1Q92888 912 aaKnown RBP24.23■■□□□ 1.47
AGAP3-225ENST00000498559 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
AGAP3-225ENST00000498559 GRIN3BO60391 1043 aa24.22■■□□□ 1.47
AGAP3-225ENST00000498559 CRKLP46109 303 aaKnown RBP24.22■■□□□ 1.47
AGAP3-225ENST00000498559 GIGYF1O75420 1035 aaPredicted RBP24.2■■□□□ 1.46
AGAP3-225ENST00000498559 MMP10P09238 476 aa24.2■■□□□ 1.46
AGAP3-225ENST00000498559 SIPA1L3O60292 1781 aaPredicted RBP24.2■■□□□ 1.46
AGAP3-225ENST00000498559 KIAA1551Q9HCM1 1747 aa24.2■■□□□ 1.46
AGAP3-225ENST00000498559 GYS1P13807 737 aa24.19■■□□□ 1.46
AGAP3-225ENST00000498559 NLGN1Q8N2Q7 840 aa24.19■■□□□ 1.46
AGAP3-225ENST00000498559 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
AGAP3-225ENST00000498559 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
AGAP3-225ENST00000498559 RFC4P35249 363 aa24.17■■□□□ 1.46
AGAP3-225ENST00000498559 SLC39A6Q13433 755 aa24.17■■□□□ 1.46
AGAP3-225ENST00000498559 INTS5Q6P9B9 1019 aaKnown RBP24.17■■□□□ 1.46
AGAP3-225ENST00000498559 GAS2L2Q8NHY3 880 aa24.17■■□□□ 1.46
AGAP3-225ENST00000498559 C10orf71Q711Q0 1435 aa24.17■■□□□ 1.46
AGAP3-225ENST00000498559 DNAJC10Q8IXB1 793 aa24.16■■□□□ 1.46
AGAP3-225ENST00000498559 RSPH6AQ9H0K4 717 aa24.16■■□□□ 1.46
AGAP3-225ENST00000498559 GNAT3A8MTJ3 354 aa24.15■■□□□ 1.46
AGAP3-225ENST00000498559 USP42Q9H9J4 1324 aaKnown RBP24.14■■□□□ 1.46
AGAP3-225ENST00000498559 PXDNLA1KZ92 1463 aa24.14■■□□□ 1.46
AGAP3-225ENST00000498559 VSIG10Q8N0Z9 540 aa24.14■■□□□ 1.45
AGAP3-225ENST00000498559 IL17REQ8NFR9 667 aa24.14■■□□□ 1.45
AGAP3-225ENST00000498559 CCDC87Q9NVE4 849 aa24.14■■□□□ 1.45
AGAP3-225ENST00000498559 CEMIPQ8WUJ3 1361 aa24.14■■□□□ 1.45
AGAP3-225ENST00000498559 CYP19A1P11511 503 aaPredicted RBP24.13■■□□□ 1.45
AGAP3-225ENST00000498559 PRKAR2BP31323 418 aa24.13■■□□□ 1.45
AGAP3-225ENST00000498559 SOS1Q07889 1333 aaPredicted RBP24.12■■□□□ 1.45
AGAP3-225ENST00000498559 PHACTR3Q96KR7 559 aa24.12■■□□□ 1.45
AGAP3-225ENST00000498559 SRP68Q9UHB9 627 aaKnown RBP24.12■■□□□ 1.45
AGAP3-225ENST00000498559 NUDCQ9Y266 331 aa24.12■■□□□ 1.45
AGAP3-225ENST00000498559 N4BP2Q86UW6 1770 aaPredicted RBP24.11■■□□□ 1.45
AGAP3-225ENST00000498559 BRCA1P38398 1863 aaKnown RBP24.09■■□□□ 1.45
AGAP3-225ENST00000498559 CEP350Q5VT06 3117 aa24.09■■□□□ 1.45
AGAP3-225ENST00000498559 TEFQ10587 303 aa24.09■■□□□ 1.45
AGAP3-225ENST00000498559 FKBP8Q14318 412 aa24.09■■□□□ 1.45
AGAP3-225ENST00000498559 ATP10DQ9P241 1426 aa24.09■■□□□ 1.45
AGAP3-225ENST00000498559 COL15A1P39059 1388 aa24.08■■□□□ 1.45
AGAP3-225ENST00000498559 TGFB2P61812 414 aa24.08■■□□□ 1.45
AGAP3-225ENST00000498559 ZBTB1Q9Y2K1 713 aa24.08■■□□□ 1.45
AGAP3-225ENST00000498559 PARP3Q9Y6F1 533 aa24.08■■□□□ 1.45
AGAP3-225ENST00000498559 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
AGAP3-225ENST00000498559 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
AGAP3-225ENST00000498559 ZNF790Q6PG37 636 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms