RNA–Protein interactions for RNA: ENST00000498069.5

SCG5-208, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 612 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-208	ENST00000498069	GAS2L2	Q8NHY3	880 aa		13.57	□□□□□ -0.24
SCG5-208	ENST00000498069	SYT17	Q9BSW7	474 aa		13.57	□□□□□ -0.24
SCG5-208	ENST00000498069	SHANK3	Q9BYB0	1731 aa		13.56	□□□□□ -0.24
SCG5-208	ENST00000498069	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.56	□□□□□ -0.24
SCG5-208	ENST00000498069	GNPAT	O15228	680 aa		13.56	□□□□□ -0.24
SCG5-208	ENST00000498069	RNMT	O43148	476 aa	Known RBP	13.56	□□□□□ -0.24
SCG5-208	ENST00000498069	KLHL34	Q8N239	644 aa		13.56	□□□□□ -0.24
SCG5-208	ENST00000498069	SLC52A2	Q9HAB3	445 aa		13.56	□□□□□ -0.24
SCG5-208	ENST00000498069	GNAT3	A8MTJ3	354 aa		13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	SSFA2	P28290	1259 aa		13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	ZEB1	P37275	1124 aa	Predicted RBP	13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	DDX10	Q13206	875 aa	Known RBP	13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	TRAPPC3L	Q5T215	181 aa		13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	RTCB	Q9Y3I0	505 aa	Known RBP	13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	PKD1L3	Q7Z443	1732 aa		13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	KDM6A	O15550	1401 aa	Predicted RBP	13.55	□□□□□ -0.24
SCG5-208	ENST00000498069	SRCAP	Q6ZRS2	3230 aa		13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	PAPPA	Q13219	1627 aa		13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	FCHSD2	O94868	740 aa		13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	NEFM	P07197	916 aa		13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	PRKAR2B	P31323	418 aa		13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	RC3H1	Q5TC82	1133 aa	Known RBP	13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	MSL1	Q68DK7	614 aa		13.54	□□□□□ -0.24
SCG5-208	ENST00000498069	TEF	Q10587	303 aa		13.53	□□□□□ -0.24
SCG5-208	ENST00000498069	SMIM5	Q71RC9	77 aa		13.53	□□□□□ -0.24
SCG5-208	ENST00000498069	SLC4A9	Q96Q91	983 aa		13.53	□□□□□ -0.24
SCG5-208	ENST00000498069	RPS6KA4	O75676	772 aa		13.52	□□□□□ -0.25
SCG5-208	ENST00000498069	RALBP1	Q15311	655 aa		13.52	□□□□□ -0.25
SCG5-208	ENST00000498069	RTF1	Q92541	710 aa	Known RBP	13.52	□□□□□ -0.25
SCG5-208	ENST00000498069	PHACTR3	Q96KR7	559 aa		13.52	□□□□□ -0.25
SCG5-208	ENST00000498069	RSPH6A	Q9H0K4	717 aa		13.52	□□□□□ -0.25
SCG5-208	ENST00000498069	CASZ1	Q86V15	1759 aa		13.51	□□□□□ -0.25
SCG5-208	ENST00000498069	RFC4	P35249	363 aa		13.51	□□□□□ -0.25
SCG5-208	ENST00000498069	SLC39A6	Q13433	755 aa		13.51	□□□□□ -0.25
SCG5-208	ENST00000498069	TTC5	Q8N0Z6	440 aa		13.51	□□□□□ -0.25
SCG5-208	ENST00000498069	IL17RE	Q8NFR9	667 aa		13.51	□□□□□ -0.25
SCG5-208	ENST00000498069	PNN	Q9H307	717 aa	Known RBP	13.51	□□□□□ -0.25
SCG5-208	ENST00000498069	CNTNAP4	Q9C0A0	1308 aa		13.5	□□□□□ -0.25
SCG5-208	ENST00000498069	ADRA2B	P18089	450 aa		13.5	□□□□□ -0.25
SCG5-208	ENST00000498069	AMIGO3	Q86WK7	504 aa		13.5	□□□□□ -0.25
SCG5-208	ENST00000498069	ARHGEF1	Q92888	912 aa	Known RBP	13.5	□□□□□ -0.25
SCG5-208	ENST00000498069	COL3A1	P02461	1466 aa	Predicted RBP	13.49	□□□□□ -0.25
SCG5-208	ENST00000498069	MAP3K5	Q99683	1374 aa		13.49	□□□□□ -0.25
SCG5-208	ENST00000498069	CRKL	P46109	303 aa	Known RBP	13.49	□□□□□ -0.25
SCG5-208	ENST00000498069	GPR162	Q16538	588 aa		13.49	□□□□□ -0.25
SCG5-208	ENST00000498069	NLGN1	Q8N2Q7	840 aa		13.49	□□□□□ -0.25
SCG5-208	ENST00000498069	LY75	O60449	1722 aa		13.49	□□□□□ -0.25
SCG5-208	ENST00000498069	TOGARAM1	Q9Y4F4	1720 aa		13.48	□□□□□ -0.25
SCG5-208	ENST00000498069	DNAJC10	Q8IXB1	793 aa		13.48	□□□□□ -0.25
SCG5-208	ENST00000498069	VSIG10	Q8N0Z9	540 aa		13.48	□□□□□ -0.25
SCG5-208	ENST00000498069	CD2AP	Q9Y5K6	639 aa		13.48	□□□□□ -0.25
SCG5-208	ENST00000498069	BTBD11	A6QL63	1104 aa		13.47	□□□□□ -0.25
SCG5-208	ENST00000498069	HTATSF1	O43719	755 aa	Known RBP	13.47	□□□□□ -0.25
SCG5-208	ENST00000498069	YY1	P25490	414 aa		13.47	□□□□□ -0.25
SCG5-208	ENST00000498069	PELP1	Q8IZL8	1130 aa	Known RBP	13.47	□□□□□ -0.25
SCG5-208	ENST00000498069	KAT6B	Q8WYB5	2073 aa		13.46	□□□□□ -0.25
SCG5-208	ENST00000498069	STARD3NL	O95772	234 aa		13.46	□□□□□ -0.25
SCG5-208	ENST00000498069	INTS5	Q6P9B9	1019 aa	Known RBP	13.46	□□□□□ -0.25
SCG5-208	ENST00000498069	ZNF790	Q6PG37	636 aa		13.46	□□□□□ -0.25
SCG5-208	ENST00000498069	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.46	□□□□□ -0.25
SCG5-208	ENST00000498069	CCDC87	Q9NVE4	849 aa		13.46	□□□□□ -0.25
SCG5-208	ENST00000498069	CYP19A1	P11511	503 aa	Predicted RBP	13.45	□□□□□ -0.26
SCG5-208	ENST00000498069	NLGN2	Q8NFZ4	835 aa		13.45	□□□□□ -0.26
SCG5-208	ENST00000498069	C4B	P0C0L5	1744 aa		13.44	□□□□□ -0.26
SCG5-208	ENST00000498069	ZPR1	O75312	459 aa		13.44	□□□□□ -0.26
SCG5-208	ENST00000498069	MMP10	P09238	476 aa		13.44	□□□□□ -0.26
SCG5-208	ENST00000498069	MCM10	Q7L590	875 aa		13.44	□□□□□ -0.26
SCG5-208	ENST00000498069	FMNL2	Q96PY5	1086 aa		13.44	□□□□□ -0.26
SCG5-208	ENST00000498069	PARP3	Q9Y6F1	533 aa		13.44	□□□□□ -0.26
SCG5-208	ENST00000498069	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.43	□□□□□ -0.26
SCG5-208	ENST00000498069	MAPK8IP3	Q9UPT6	1336 aa		13.43	□□□□□ -0.26
SCG5-208	ENST00000498069	GYS1	P13807	737 aa		13.43	□□□□□ -0.26
SCG5-208	ENST00000498069	CANX	P27824	592 aa	Known RBP	13.43	□□□□□ -0.26
SCG5-208	ENST00000498069	NPM2	Q86SE8	214 aa	Known RBP	13.43	□□□□□ -0.26
SCG5-208	ENST00000498069	ZNF496	Q96IT1	587 aa	Predicted RBP	13.43	□□□□□ -0.26
SCG5-208	ENST00000498069	ITGB4	P16144	1822 aa		13.42	□□□□□ -0.26
SCG5-208	ENST00000498069	DCTN1	Q14203	1278 aa		13.42	□□□□□ -0.26
SCG5-208	ENST00000498069	TAF7	Q15545	349 aa	Predicted RBP	13.42	□□□□□ -0.26
SCG5-208	ENST00000498069	PLEKHF1	Q96S99	279 aa		13.42	□□□□□ -0.26
SCG5-208	ENST00000498069	C5	P01031	1676 aa		13.42	□□□□□ -0.26
SCG5-208	ENST00000498069	CEMIP	Q8WUJ3	1361 aa		13.42	□□□□□ -0.26
SCG5-208	ENST00000498069	GRIN3B	O60391	1043 aa		13.41	□□□□□ -0.26
SCG5-208	ENST00000498069	SRP68	Q9UHB9	627 aa	Known RBP	13.41	□□□□□ -0.26
SCG5-208	ENST00000498069		A0A087WZG4	1122 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	KCNQ3	O43525	872 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	NFE2L2	Q16236	605 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	USPL1	Q5W0Q7	1092 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	PNISR	Q8TF01	805 aa	Known RBP	13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	ZBTB1	Q9Y2K1	713 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	HEG1	Q9ULI3	1381 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	MRC1	P22897	1456 aa		13.4	□□□□□ -0.26
SCG5-208	ENST00000498069	SOS1	Q07889	1333 aa	Predicted RBP	13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	USP42	Q9H9J4	1324 aa	Known RBP	13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	TGFB2	P61812	414 aa		13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	FKBP8	Q14318	412 aa		13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	WDR43	Q15061	677 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	NARF	Q9UHQ1	456 aa		13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	QSER1	Q2KHR3	1735 aa		13.39	□□□□□ -0.27
SCG5-208	ENST00000498069	SNRPA1	P09661	255 aa	Known RBP	13.38	□□□□□ -0.27
SCG5-208	ENST00000498069	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms