RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 CCDC178Q5BJE1 867 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 CC2D1AQ6P1N0 951 aaPredicted RBP6.05□□□□□ -1.44
CUL3-212ENST00000497715 NCAPG2Q86XI2 1143 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 C17orf50Q8WW18 174 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 CCDC47Q96A33 483 aaKnown RBP6.05□□□□□ -1.44
CUL3-212ENST00000497715 AGAP3Q96P47 875 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 SIN3AQ96ST3 1273 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 LARP6Q9BRS8 491 aaKnown RBP6.05□□□□□ -1.44
CUL3-212ENST00000497715 INO80BQ9C086 356 aaPredicted RBP6.05□□□□□ -1.44
CUL3-212ENST00000497715 NACA2Q9H009 215 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 MUC3BQ9H195 1237 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 RSPH9Q9H1X1 276 aaPredicted RBP6.05□□□□□ -1.44
CUL3-212ENST00000497715 FAN1Q9Y2M0 1017 aa6.05□□□□□ -1.44
CUL3-212ENST00000497715 DYTNA2CJ06 578 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 AP1G2O75843 785 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 PDE4AP27815 886 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 MAP2K2P36507 400 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 PSMC1P62191 440 aaKnown RBP6.04□□□□□ -1.44
CUL3-212ENST00000497715 ADCY2Q08462 1091 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 TRDNQ13061 729 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 TERF2Q15554 542 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 C4orf46Q504U0 113 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 GOLGA6L1Q8N7Z2 621 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 FAXDC2Q96IV6 333 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 SLC7A5P2Q9GIP4 190 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 NBPF7P0C2Y1 421 aaPredicted RBP6.04□□□□□ -1.44
CUL3-212ENST00000497715 SETSIPP0DME0 302 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 PPP2R5BQ15173 497 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 AP1ARQ63HQ0 302 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 HS6ST3Q8IZP7 471 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 MYO1HQ8N1T3 1032 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 DHRS1Q96LJ7 313 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 MMTAG2Q9BU76 263 aaKnown RBP6.04□□□□□ -1.44
CUL3-212ENST00000497715 GRPEL1Q9HAV7 217 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 INCENPQ9NQS7 918 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 GINM1Q9NU53 330 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 USP25Q9UHP3 1055 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 PRR12Q9ULL5 1215 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 TBC1D2BQ9UPU7 963 aa6.04□□□□□ -1.44
CUL3-212ENST00000497715 SPAG9O60271 1321 aaKnown RBP6.04□□□□□ -1.44
CUL3-212ENST00000497715 TRIM64CA6NLI5 447 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 ELL2O00472 640 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 PPP1R15AO75807 674 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 NEBLO76041 1014 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 CSPG5O95196 566 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 PYGLP06737 847 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 CCDC175P0C221 793 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 PRIM1P49642 420 aaKnown RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 PREPLQ4J6C6 727 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 HHATQ5VTY9 493 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 WWC2Q6AWC2 1192 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 NFATC2IPQ8NCF5 419 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 BICD1Q96G01 975 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 VEZTQ9HBM0 779 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 TRMT1Q9NXH9 659 aaKnown RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 UTP6Q9NYH9 597 aaKnown RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 IP6K2Q9UHH9 426 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 CFAP65Q6ZU64 1925 aaKnown RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 TMCO5BA8MYB1 307 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 GIGYF1O75420 1035 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 HDLBPQ00341 1268 aaKnown RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 PSME1Q06323 249 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 C10orf62Q5T681 223 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 LMBRD2Q68DH5 695 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 MCTP2Q6DN12 878 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 PDCL2Q8N4E4 241 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 USP33Q8TEY7 942 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 CCDC34Q96HJ3 373 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 FAM117AQ9C073 453 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 LMCD1Q9NZU5 365 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 POLKQ9UBT6 870 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 ABCF2Q9UG63 623 aa6.03□□□□□ -1.44
CUL3-212ENST00000497715 ARIH1Q9Y4X5 557 aaPredicted RBP6.03□□□□□ -1.44
CUL3-212ENST00000497715 GOLGA6L6A8MZA4 724 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 NEFHP12036 1026 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 ZNF24P17028 368 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 ENPP1P22413 925 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 NOLC1Q14978 699 aaKnown RBP eCLIP6.02□□□□□ -1.45
CUL3-212ENST00000497715 KANK3Q6NY19 840 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 SYNE3Q6ZMZ3 975 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 ANKRD20A12PQ8NF67 263 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 CCDC26Q8TAB7 109 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 DEF6Q9H4E7 631 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 SBNO2Q9Y2G9 1366 aa6.02□□□□□ -1.45
CUL3-212ENST00000497715 MYO1BO43795 1136 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 KIF5CO60282 957 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 MMEP08473 750 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 STIP1P31948 543 aaKnown RBP6.01□□□□□ -1.45
CUL3-212ENST00000497715 TBC1D8BQ0IIM8 1120 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 TRAF1Q13077 416 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 SNX1Q13596 522 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 WAPLQ7Z5K2 1190 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 RPUSD2Q8IZ73 545 aaKnown RBP6.01□□□□□ -1.45
CUL3-212ENST00000497715 PDILTQ8N807 584 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 SPC24Q8NBT2 197 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 CD248Q9HCU0 757 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 ZNF446Q9NWS9 450 aa6.01□□□□□ -1.45
CUL3-212ENST00000497715 TFIP11Q9UBB9 837 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms