RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 ZNF831Q5JPB2 1677 aa25.07■■□□□ 1.6
RPN1-208ENST00000497415 ADAMTS7Q9UKP4 1686 aa25.07■■□□□ 1.6
RPN1-208ENST00000497415 SGIP1Q9BQI5 828 aa25.07■■□□□ 1.6
RPN1-208ENST00000497415 NFATC2IPQ8NCF5 419 aa25.06■■□□□ 1.6
RPN1-208ENST00000497415 COL24A1Q17RW2 1714 aa25.06■■□□□ 1.6
RPN1-208ENST00000497415 RSPH6AQ9H0K4 717 aa25.05■■□□□ 1.6
RPN1-208ENST00000497415 LGR6Q9HBX8 967 aa25.05■■□□□ 1.6
RPN1-208ENST00000497415 PPP1R1BQ9UD71 204 aaPredicted RBP25.05■■□□□ 1.6
RPN1-208ENST00000497415 RNMTO43148 476 aaKnown RBP25.04■■□□□ 1.6
RPN1-208ENST00000497415 ATP6V1AP38606 617 aa25.04■■□□□ 1.6
RPN1-208ENST00000497415 ITPK1Q13572 414 aa25.04■■□□□ 1.6
RPN1-208ENST00000497415 MRC1P22897 1456 aa25.03■■□□□ 1.6
RPN1-208ENST00000497415 LINC00116Q8NCU8 138 aa25.03■■□□□ 1.6
RPN1-208ENST00000497415 SLC4A9Q96Q91 983 aa25.03■■□□□ 1.6
RPN1-208ENST00000497415 UBR3Q6ZT12 1888 aa25.02■■□□□ 1.6
RPN1-208ENST00000497415 RALBP1Q15311 655 aa25.02■■□□□ 1.6
RPN1-208ENST00000497415 COL23A1Q86Y22 540 aaPredicted RBP25.02■■□□□ 1.6
RPN1-208ENST00000497415 GAS2L2Q8NHY3 880 aa25.02■■□□□ 1.6
RPN1-208ENST00000497415 SLC52A2Q9HAB3 445 aa25.02■■□□□ 1.6
RPN1-208ENST00000497415 U2AF1L5P0DN76 240 aaPredicted RBP25.01■■□□□ 1.59
RPN1-208ENST00000497415 PRKAR2BP31323 418 aa25.01■■□□□ 1.59
RPN1-208ENST00000497415 U2AF1Q01081 240 aaKnown RBP eCLIP25.01■■□□□ 1.59
RPN1-208ENST00000497415 FLAD1Q8NFF5 587 aa25.01■■□□□ 1.59
RPN1-208ENST00000497415 FCHSD2O94868 740 aa25■■□□□ 1.59
RPN1-208ENST00000497415 PHACTR3Q96KR7 559 aa25■■□□□ 1.59
RPN1-208ENST00000497415 AK7Q96M32 723 aa25■■□□□ 1.59
RPN1-208ENST00000497415 RBM42Q9BTD8 480 aaKnown RBP25■■□□□ 1.59
RPN1-208ENST00000497415 MAP3K5Q99683 1374 aa24.98■■□□□ 1.59
RPN1-208ENST00000497415 COL5A3P25940 1745 aaPredicted RBP24.98■■□□□ 1.59
RPN1-208ENST00000497415 GNAT3A8MTJ3 354 aa24.97■■□□□ 1.59
RPN1-208ENST00000497415 AMIGO3Q86WK7 504 aa24.97■■□□□ 1.59
RPN1-208ENST00000497415 CICQ96RK0 1608 aaPredicted RBP24.97■■□□□ 1.59
RPN1-208ENST00000497415 SSFA2P28290 1259 aa24.95■■□□□ 1.58
RPN1-208ENST00000497415 IL17REQ8NFR9 667 aa24.95■■□□□ 1.58
RPN1-208ENST00000497415 MSH5O43196 834 aa24.94■■□□□ 1.58
RPN1-208ENST00000497415 PTCD1O75127 700 aaKnown RBP24.94■■□□□ 1.58
RPN1-208ENST00000497415 RC3H1Q5TC82 1133 aaKnown RBP24.94■■□□□ 1.58
RPN1-208ENST00000497415 ARXQ96QS3 562 aa24.94■■□□□ 1.58
RPN1-208ENST00000497415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.93■■□□□ 1.58
RPN1-208ENST00000497415 SIPA1L3O60292 1781 aaPredicted RBP24.93■■□□□ 1.58
RPN1-208ENST00000497415 TJP1Q07157 1748 aa24.92■■□□□ 1.58
RPN1-208ENST00000497415 CNTNAP4Q9C0A0 1308 aa24.92■■□□□ 1.58
RPN1-208ENST00000497415 GNPATO15228 680 aa24.92■■□□□ 1.58
RPN1-208ENST00000497415 POLD1P28340 1107 aa24.92■■□□□ 1.58
RPN1-208ENST00000497415 MYH14Q7Z406 1995 aaKnown RBP24.92■■□□□ 1.58
RPN1-208ENST00000497415 CEMIPQ8WUJ3 1361 aa24.92■■□□□ 1.58
RPN1-208ENST00000497415 SLC39A6Q13433 755 aa24.91■■□□□ 1.58
RPN1-208ENST00000497415 SMIM5Q71RC9 77 aa24.91■■□□□ 1.58
RPN1-208ENST00000497415 PHF14O94880 888 aa24.9■■□□□ 1.58
RPN1-208ENST00000497415 FHDC1Q9C0D6 1143 aaPredicted RBP24.9■■□□□ 1.58
RPN1-208ENST00000497415 KCPQ6ZWJ8 1503 aa24.9■■□□□ 1.58
RPN1-208ENST00000497415 UBR2Q8IWV8 1755 aa24.9■■□□□ 1.58
RPN1-208ENST00000497415 MYBBP1AQ9BQG0 1328 aaKnown RBP24.89■■□□□ 1.58
RPN1-208ENST00000497415 SYT17Q9BSW7 474 aa24.89■■□□□ 1.58
RPN1-208ENST00000497415 TEFQ10587 303 aa24.88■■□□□ 1.57
RPN1-208ENST00000497415 RTCBQ9Y3I0 505 aaKnown RBP24.88■■□□□ 1.57
RPN1-208ENST00000497415 RPS6KA4O75676 772 aa24.87■■□□□ 1.57
RPN1-208ENST00000497415 PLEKHF1Q96S99 279 aa24.87■■□□□ 1.57
RPN1-208ENST00000497415 MSL1Q68DK7 614 aa24.86■■□□□ 1.57
RPN1-208ENST00000497415 HTATSF1O43719 755 aaKnown RBP24.85■■□□□ 1.57
RPN1-208ENST00000497415 CRKLP46109 303 aaKnown RBP24.85■■□□□ 1.57
RPN1-208ENST00000497415 VSIG10Q8N0Z9 540 aa24.85■■□□□ 1.57
RPN1-208ENST00000497415 ADRA2BP18089 450 aa24.84■■□□□ 1.57
RPN1-208ENST00000497415 TRAPPC3LQ5T215 181 aa24.84■■□□□ 1.57
RPN1-208ENST00000497415 DNAJC10Q8IXB1 793 aa24.84■■□□□ 1.57
RPN1-208ENST00000497415 PRKRIP1Q9H875 184 aaPredicted RBP24.84■■□□□ 1.57
RPN1-208ENST00000497415 DLG5Q8TDM6 1919 aa24.83■■□□□ 1.57
RPN1-208ENST00000497415 ZNF790Q6PG37 636 aa24.83■■□□□ 1.57
RPN1-208ENST00000497415 RTF1Q92541 710 aaKnown RBP24.83■■□□□ 1.57
RPN1-208ENST00000497415 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
RPN1-208ENST00000497415 NEFMP07197 916 aa24.82■■□□□ 1.56
RPN1-208ENST00000497415 INTS5Q6P9B9 1019 aaKnown RBP24.82■■□□□ 1.56
RPN1-208ENST00000497415 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
RPN1-208ENST00000497415 ARHGEF1Q92888 912 aaKnown RBP24.82■■□□□ 1.56
RPN1-208ENST00000497415 CYP19A1P11511 503 aaPredicted RBP24.81■■□□□ 1.56
RPN1-208ENST00000497415 MCM10Q7L590 875 aa24.8■■□□□ 1.56
RPN1-208ENST00000497415 C4AP0C0L4 1744 aa24.8■■□□□ 1.56
RPN1-208ENST00000497415 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
RPN1-208ENST00000497415 ZNF496Q96IT1 587 aaPredicted RBP24.79■■□□□ 1.56
RPN1-208ENST00000497415 CCDC87Q9NVE4 849 aa24.79■■□□□ 1.56
RPN1-208ENST00000497415 BTBD11A6QL63 1104 aa24.78■■□□□ 1.56
RPN1-208ENST00000497415 DCTN1Q14203 1278 aa24.78■■□□□ 1.56
RPN1-208ENST00000497415 HEG1Q9ULI3 1381 aa24.78■■□□□ 1.56
RPN1-208ENST00000497415 NFE2L2Q16236 605 aa24.77■■□□□ 1.56
RPN1-208ENST00000497415 DCAF8L1A6NGE4 600 aa24.76■■□□□ 1.55
RPN1-208ENST00000497415 RFC4P35249 363 aa24.76■■□□□ 1.55
RPN1-208ENST00000497415 KCNQ3O43525 872 aa24.75■■□□□ 1.55
RPN1-208ENST00000497415 KLHL34Q8N239 644 aa24.75■■□□□ 1.55
RPN1-208ENST00000497415 NLGN1Q8N2Q7 840 aa24.75■■□□□ 1.55
RPN1-208ENST00000497415 FMNL2Q96PY5 1086 aa24.75■■□□□ 1.55
RPN1-208ENST00000497415 TEX13AQ9BXU3 409 aaPredicted RBP24.75■■□□□ 1.55
RPN1-208ENST00000497415 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
RPN1-208ENST00000497415 GYS1P13807 737 aa24.74■■□□□ 1.55
RPN1-208ENST00000497415 SOS1Q07889 1333 aaPredicted RBP24.74■■□□□ 1.55
RPN1-208ENST00000497415 ZBTB1Q9Y2K1 713 aa24.73■■□□□ 1.55
RPN1-208ENST00000497415 CD2APQ9Y5K6 639 aa24.73■■□□□ 1.55
RPN1-208ENST00000497415 USP42Q9H9J4 1324 aaKnown RBP24.72■■□□□ 1.55
RPN1-208ENST00000497415 STARD3NLO95772 234 aa24.72■■□□□ 1.55
RPN1-208ENST00000497415 TAF7Q15545 349 aaPredicted RBP24.72■■□□□ 1.55
RPN1-208ENST00000497415 NLGN2Q8NFZ4 835 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms