RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 DCTN1Q14203 1278 aa19.02■□□□□ 0.64
USP11-212ENST00000497179 NEUROD2Q15784 382 aa19.02■□□□□ 0.64
USP11-212ENST00000497179 NFATC2IPQ8NCF5 419 aa19.02■□□□□ 0.64
USP11-212ENST00000497179 LY75O60449 1722 aa19.01■□□□□ 0.63
USP11-212ENST00000497179 PLSCR1O15162 318 aa19.01■□□□□ 0.63
USP11-212ENST00000497179 TEFQ10587 303 aa19.01■□□□□ 0.63
USP11-212ENST00000497179 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
USP11-212ENST00000497179 TRIM35Q9UPQ4 493 aa19.01■□□□□ 0.63
USP11-212ENST00000497179 RREB1Q92766 1687 aa19.01■□□□□ 0.63
USP11-212ENST00000497179 KAT6BQ8WYB5 2073 aa19.01■□□□□ 0.63
USP11-212ENST00000497179 PALLDQ8WX93 1383 aa18.99■□□□□ 0.63
USP11-212ENST00000497179 DEFB132Q7Z7B7 95 aa18.99■□□□□ 0.63
USP11-212ENST00000497179 THUMPD2Q9BTF0 503 aaKnown RBP18.99■□□□□ 0.63
USP11-212ENST00000497179 EN1Q05925 392 aaPredicted RBP18.98■□□□□ 0.63
USP11-212ENST00000497179 SMARCC1Q92922 1105 aaPredicted RBP18.98■□□□□ 0.63
USP11-212ENST00000497179 CAMKK2Q96RR4 588 aa18.98■□□□□ 0.63
USP11-212ENST00000497179 ATG3Q9NT62 314 aa18.98■□□□□ 0.63
USP11-212ENST00000497179 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
USP11-212ENST00000497179 UBR2Q8IWV8 1755 aa18.97■□□□□ 0.63
USP11-212ENST00000497179 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
USP11-212ENST00000497179 KCPQ6ZWJ8 1503 aa18.96■□□□□ 0.63
USP11-212ENST00000497179 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
USP11-212ENST00000497179 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
USP11-212ENST00000497179 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
USP11-212ENST00000497179 NUP188Q5SRE5 1749 aa18.95■□□□□ 0.62
USP11-212ENST00000497179 EZH2Q15910 746 aaKnown RBP18.95■□□□□ 0.62
USP11-212ENST00000497179 CICQ96RK0 1608 aaPredicted RBP18.95■□□□□ 0.62
USP11-212ENST00000497179 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
USP11-212ENST00000497179 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
USP11-212ENST00000497179 TXNRD1Q16881 649 aa18.94■□□□□ 0.62
USP11-212ENST00000497179 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
USP11-212ENST00000497179 SLC39A6Q13433 755 aa18.93■□□□□ 0.62
USP11-212ENST00000497179 PROM2Q8N271 834 aa18.93■□□□□ 0.62
USP11-212ENST00000497179 CALD1Q05682 793 aaKnown RBP18.92■□□□□ 0.62
USP11-212ENST00000497179 SLC27A3Q5K4L6 730 aa18.92■□□□□ 0.62
USP11-212ENST00000497179 ZNF790Q6PG37 636 aa18.92■□□□□ 0.62
USP11-212ENST00000497179 WWC1Q8IX03 1113 aa18.92■□□□□ 0.62
USP11-212ENST00000497179 BABAM1Q9NWV8 329 aa18.92■□□□□ 0.62
USP11-212ENST00000497179 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
USP11-212ENST00000497179 SIK1P57059 783 aa18.91■□□□□ 0.62
USP11-212ENST00000497179 TTC5Q8N0Z6 440 aa18.91■□□□□ 0.62
USP11-212ENST00000497179 TJP1Q07157 1748 aa18.91■□□□□ 0.62
USP11-212ENST00000497179 C5P01031 1676 aa18.9■□□□□ 0.62
USP11-212ENST00000497179 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
USP11-212ENST00000497179 SLC4A9Q96Q91 983 aa18.89■□□□□ 0.61
USP11-212ENST00000497179 LRRC4BQ9NT99 713 aa18.89■□□□□ 0.61
USP11-212ENST00000497179 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
USP11-212ENST00000497179 CHL1O00533 1208 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 KCNQ3O43525 872 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 PTCD1O75127 700 aaKnown RBP18.88■□□□□ 0.61
USP11-212ENST00000497179 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 CFAP44Q96MT7 982 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
USP11-212ENST00000497179 IFT57Q9NWB7 429 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 TSPYL4Q9UJ04 414 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 IL16Q14005 1332 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 ZNF521Q96K83 1311 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 COL5A3P25940 1745 aaPredicted RBP18.88■□□□□ 0.61
USP11-212ENST00000497179 TAF1LQ8IZX4 1826 aa18.88■□□□□ 0.61
USP11-212ENST00000497179 WDR63Q8IWG1 891 aa18.87■□□□□ 0.61
USP11-212ENST00000497179 ZNF496Q96IT1 587 aaPredicted RBP18.87■□□□□ 0.61
USP11-212ENST00000497179 FMNL2Q96PY5 1086 aa18.87■□□□□ 0.61
USP11-212ENST00000497179 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
USP11-212ENST00000497179 ATP6V1AP38606 617 aa18.86■□□□□ 0.61
USP11-212ENST00000497179 KCNQ4P56696 695 aa18.86■□□□□ 0.61
USP11-212ENST00000497179 GNAI1P63096 354 aa18.86■□□□□ 0.61
USP11-212ENST00000497179 ITPK1Q13572 414 aa18.86■□□□□ 0.61
USP11-212ENST00000497179 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
USP11-212ENST00000497179 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
USP11-212ENST00000497179 LAS1LQ9Y4W2 734 aaKnown RBP18.85■□□□□ 0.61
USP11-212ENST00000497179 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
USP11-212ENST00000497179 EIF4A1P60842 406 aaKnown RBP18.83■□□□□ 0.6
USP11-212ENST00000497179 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.6
USP11-212ENST00000497179 MBIPQ9NS73 344 aa18.83■□□□□ 0.6
USP11-212ENST00000497179 LAMB4A4D0S4 1761 aa18.83■□□□□ 0.6
USP11-212ENST00000497179 DNAJC10Q8IXB1 793 aa18.82■□□□□ 0.6
USP11-212ENST00000497179 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
USP11-212ENST00000497179 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
USP11-212ENST00000497179 CNTNAP4Q9C0A0 1308 aa18.8■□□□□ 0.6
USP11-212ENST00000497179 SNRPA1P09661 255 aaKnown RBP18.8■□□□□ 0.6
USP11-212ENST00000497179 ZNF827Q17R98 1081 aa18.8■□□□□ 0.6
USP11-212ENST00000497179 NBPF14Q5TI25 921 aa18.8■□□□□ 0.6
USP11-212ENST00000497179 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
USP11-212ENST00000497179 TEX13AQ9BXU3 409 aaPredicted RBP18.8■□□□□ 0.6
USP11-212ENST00000497179 QSER1Q2KHR3 1735 aa18.8■□□□□ 0.6
USP11-212ENST00000497179 STK32BQ9NY57 414 aa18.79■□□□□ 0.6
USP11-212ENST00000497179 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
USP11-212ENST00000497179 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
USP11-212ENST00000497179 CYP19A1P11511 503 aaPredicted RBP18.78■□□□□ 0.6
USP11-212ENST00000497179 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
USP11-212ENST00000497179 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
USP11-212ENST00000497179 RC3H1Q5TC82 1133 aaKnown RBP18.78■□□□□ 0.6
USP11-212ENST00000497179 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
USP11-212ENST00000497179 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
USP11-212ENST00000497179 TUBGCP6Q96RT7 1819 aa18.78■□□□□ 0.6
USP11-212ENST00000497179 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
USP11-212ENST00000497179 STARD3NLO95772 234 aa18.77■□□□□ 0.6
USP11-212ENST00000497179 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
USP11-212ENST00000497179 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms