RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 AMOTQ4VCS5 1084 aa19.43■□□□□ 0.7
VTI1A-209ENST00000496445 ATG3Q9NT62 314 aa19.43■□□□□ 0.7
VTI1A-209ENST00000496445 ITPK1Q13572 414 aa19.42■□□□□ 0.7
VTI1A-209ENST00000496445 DCAF5Q96JK2 942 aa19.42■□□□□ 0.7
VTI1A-209ENST00000496445 CICQ96RK0 1608 aaPredicted RBP19.41■□□□□ 0.7
VTI1A-209ENST00000496445 ADAMTS7Q9UKP4 1686 aa19.41■□□□□ 0.7
VTI1A-209ENST00000496445 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
VTI1A-209ENST00000496445 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
VTI1A-209ENST00000496445 MSL1Q68DK7 614 aa19.41■□□□□ 0.7
VTI1A-209ENST00000496445 AK7Q96M32 723 aa19.41■□□□□ 0.7
VTI1A-209ENST00000496445 CHD4Q14839 1912 aa19.41■□□□□ 0.7
VTI1A-209ENST00000496445 TJP1Q07157 1748 aa19.4■□□□□ 0.7
VTI1A-209ENST00000496445 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
VTI1A-209ENST00000496445 YY1P25490 414 aa19.4■□□□□ 0.7
VTI1A-209ENST00000496445 SMIM5Q71RC9 77 aa19.4■□□□□ 0.7
VTI1A-209ENST00000496445 HMGB2P26583 209 aaKnown RBP19.39■□□□□ 0.69
VTI1A-209ENST00000496445 FLAD1Q8NFF5 587 aa19.39■□□□□ 0.69
VTI1A-209ENST00000496445 SLC4A9Q96Q91 983 aa19.39■□□□□ 0.69
VTI1A-209ENST00000496445 MRC1P22897 1456 aa19.38■□□□□ 0.69
VTI1A-209ENST00000496445 ATP6V1AP38606 617 aa19.38■□□□□ 0.69
VTI1A-209ENST00000496445 KLHL34Q8N239 644 aa19.38■□□□□ 0.69
VTI1A-209ENST00000496445 MYH14Q7Z406 1995 aaKnown RBP19.37■□□□□ 0.69
VTI1A-209ENST00000496445 C4AP0C0L4 1744 aa19.37■□□□□ 0.69
VTI1A-209ENST00000496445 PHF14O94880 888 aa19.37■□□□□ 0.69
VTI1A-209ENST00000496445 C1orf141Q5JVX7 400 aa19.37■□□□□ 0.69
VTI1A-209ENST00000496445 NLGN2Q8NFZ4 835 aa19.37■□□□□ 0.69
VTI1A-209ENST00000496445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.36■□□□□ 0.69
VTI1A-209ENST00000496445 HMOX1P09601 288 aa19.36■□□□□ 0.69
VTI1A-209ENST00000496445 SSFA2P28290 1259 aa19.36■□□□□ 0.69
VTI1A-209ENST00000496445 CABP4P57796 275 aa19.35■□□□□ 0.69
VTI1A-209ENST00000496445 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
VTI1A-209ENST00000496445 GNPATO15228 680 aa19.34■□□□□ 0.69
VTI1A-209ENST00000496445 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
VTI1A-209ENST00000496445 AKAP4Q5JQC9 854 aa19.33■□□□□ 0.68
VTI1A-209ENST00000496445 RBM42Q9BTD8 480 aaKnown RBP19.33■□□□□ 0.68
VTI1A-209ENST00000496445 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
VTI1A-209ENST00000496445 UBR2Q8IWV8 1755 aa19.32■□□□□ 0.68
VTI1A-209ENST00000496445 SIPA1L3O60292 1781 aaPredicted RBP19.31■□□□□ 0.68
VTI1A-209ENST00000496445 CNTNAP4Q9C0A0 1308 aa19.3■□□□□ 0.68
VTI1A-209ENST00000496445 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
VTI1A-209ENST00000496445 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
VTI1A-209ENST00000496445 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
VTI1A-209ENST00000496445 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
VTI1A-209ENST00000496445 KIAA1551Q9HCM1 1747 aa19.29■□□□□ 0.68
VTI1A-209ENST00000496445 GPR162Q16538 588 aa19.28■□□□□ 0.68
VTI1A-209ENST00000496445 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
VTI1A-209ENST00000496445 RNMTO43148 476 aaKnown RBP19.27■□□□□ 0.68
VTI1A-209ENST00000496445 PTCD1O75127 700 aaKnown RBP19.27■□□□□ 0.68
VTI1A-209ENST00000496445 RC3H1Q5TC82 1133 aaKnown RBP19.27■□□□□ 0.68
VTI1A-209ENST00000496445 YBX3P16989 372 aaKnown RBP eCLIP19.26■□□□□ 0.67
VTI1A-209ENST00000496445 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
VTI1A-209ENST00000496445 RTCBQ9Y3I0 505 aaKnown RBP19.26■□□□□ 0.67
VTI1A-209ENST00000496445 CD2APQ9Y5K6 639 aa19.26■□□□□ 0.67
VTI1A-209ENST00000496445 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
VTI1A-209ENST00000496445 TRAPPC3LQ5T215 181 aa19.24■□□□□ 0.67
VTI1A-209ENST00000496445 RPS6KA4O75676 772 aa19.23■□□□□ 0.67
VTI1A-209ENST00000496445 CRKLP46109 303 aaKnown RBP19.23■□□□□ 0.67
VTI1A-209ENST00000496445 ARHGEF1Q92888 912 aaKnown RBP19.23■□□□□ 0.67
VTI1A-209ENST00000496445 N4BP2Q86UW6 1770 aaPredicted RBP19.23■□□□□ 0.67
VTI1A-209ENST00000496445 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
VTI1A-209ENST00000496445 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
VTI1A-209ENST00000496445 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
VTI1A-209ENST00000496445 MMP10P09238 476 aa19.21■□□□□ 0.67
VTI1A-209ENST00000496445 C10orf71Q711Q0 1435 aa19.2■□□□□ 0.66
VTI1A-209ENST00000496445 GYS1P13807 737 aa19.2■□□□□ 0.66
VTI1A-209ENST00000496445 DNAJC10Q8IXB1 793 aa19.2■□□□□ 0.66
VTI1A-209ENST00000496445 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
VTI1A-209ENST00000496445 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
VTI1A-209ENST00000496445 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
VTI1A-209ENST00000496445 GAS2L2Q8NHY3 880 aa19.19■□□□□ 0.66
VTI1A-209ENST00000496445 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
VTI1A-209ENST00000496445 PXDNLA1KZ92 1463 aa19.18■□□□□ 0.66
VTI1A-209ENST00000496445 RFC4P35249 363 aa19.18■□□□□ 0.66
VTI1A-209ENST00000496445 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
VTI1A-209ENST00000496445 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
VTI1A-209ENST00000496445 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
VTI1A-209ENST00000496445 NLGN1Q8N2Q7 840 aa19.17■□□□□ 0.66
VTI1A-209ENST00000496445 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
VTI1A-209ENST00000496445 SRP68Q9UHB9 627 aaKnown RBP19.17■□□□□ 0.66
VTI1A-209ENST00000496445 USP42Q9H9J4 1324 aaKnown RBP19.17■□□□□ 0.66
VTI1A-209ENST00000496445 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
VTI1A-209ENST00000496445 GNAT3A8MTJ3 354 aa19.16■□□□□ 0.66
VTI1A-209ENST00000496445 SOS1Q07889 1333 aaPredicted RBP19.16■□□□□ 0.66
VTI1A-209ENST00000496445 GRIN3BO60391 1043 aa19.15■□□□□ 0.66
VTI1A-209ENST00000496445 CYP19A1P11511 503 aaPredicted RBP19.15■□□□□ 0.66
VTI1A-209ENST00000496445 CCDC87Q9NVE4 849 aa19.15■□□□□ 0.66
VTI1A-209ENST00000496445 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
VTI1A-209ENST00000496445 AFDNP55196 1824 aaKnown RBP19.14■□□□□ 0.65
VTI1A-209ENST00000496445 DLG5Q8TDM6 1919 aa19.14■□□□□ 0.65
VTI1A-209ENST00000496445 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
VTI1A-209ENST00000496445 ZBTB1Q9Y2K1 713 aa19.14■□□□□ 0.65
VTI1A-209ENST00000496445 SCN7AQ01118 1682 aa19.14■□□□□ 0.65
VTI1A-209ENST00000496445 FKBP8Q14318 412 aa19.13■□□□□ 0.65
VTI1A-209ENST00000496445 NUDCQ9Y266 331 aa19.13■□□□□ 0.65
VTI1A-209ENST00000496445 COL15A1P39059 1388 aa19.13■□□□□ 0.65
VTI1A-209ENST00000496445 NRXN2Q9P2S2 1712 aa19.13■□□□□ 0.65
VTI1A-209ENST00000496445 U2AF1L5P0DN76 240 aaPredicted RBP19.12■□□□□ 0.65
VTI1A-209ENST00000496445 U2AF1Q01081 240 aaKnown RBP eCLIP19.12■□□□□ 0.65
VTI1A-209ENST00000496445 TEFQ10587 303 aa19.12■□□□□ 0.65
VTI1A-209ENST00000496445 HEG1Q9ULI3 1381 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms