RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 TSPYL6Q8N831 410 aa20.33■□□□□ 0.84
PHF1-211ENST00000495509 C8orf58Q8NAV2 365 aa20.33■□□□□ 0.84
PHF1-211ENST00000495509 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
PHF1-211ENST00000495509 KCNQ3O43525 872 aa20.32■□□□□ 0.84
PHF1-211ENST00000495509 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
PHF1-211ENST00000495509 CABP4P57796 275 aa20.31■□□□□ 0.84
PHF1-211ENST00000495509 ONECUT3O60422 494 aaPredicted RBP20.31■□□□□ 0.84
PHF1-211ENST00000495509 ZNF772Q68DY9 489 aaPredicted RBP20.31■□□□□ 0.84
PHF1-211ENST00000495509 ERVV-2B6SEH9 535 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 SLC39A6Q13433 755 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 BABAM1Q9NWV8 329 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 RGS17Q9UGC6 210 aaPredicted RBP20.29■□□□□ 0.84
PHF1-211ENST00000495509 GTF3C3Q9Y5Q9 886 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 THSD7AQ9UPZ6 1657 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 TOGARAM1Q9Y4F4 1720 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
PHF1-211ENST00000495509 MRC1P22897 1456 aa20.27■□□□□ 0.84
PHF1-211ENST00000495509 VAMP4O75379 141 aa20.27■□□□□ 0.84
PHF1-211ENST00000495509 BCAR3O75815 825 aa20.26■□□□□ 0.83
PHF1-211ENST00000495509 TWISTNBQ3B726 338 aaPredicted RBP20.26■□□□□ 0.83
PHF1-211ENST00000495509 FAM182BQ5T319 152 aa20.26■□□□□ 0.83
PHF1-211ENST00000495509 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
PHF1-211ENST00000495509 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
PHF1-211ENST00000495509 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
PHF1-211ENST00000495509 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
PHF1-211ENST00000495509 ITGB4P16144 1822 aa20.25■□□□□ 0.83
PHF1-211ENST00000495509 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
PHF1-211ENST00000495509 ACSBG1Q96GR2 724 aa20.25■□□□□ 0.83
PHF1-211ENST00000495509 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
PHF1-211ENST00000495509 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
PHF1-211ENST00000495509 PIGBQ92521 554 aa20.24■□□□□ 0.83
PHF1-211ENST00000495509 CT47B1P0C2W7 299 aaPredicted RBP20.23■□□□□ 0.83
PHF1-211ENST00000495509 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
PHF1-211ENST00000495509 TMOD3Q9NYL9 352 aa20.23■□□□□ 0.83
PHF1-211ENST00000495509 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
PHF1-211ENST00000495509 POTEAQ6S8J7 498 aa20.23■□□□□ 0.83
PHF1-211ENST00000495509 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
PHF1-211ENST00000495509 PLIN1O60240 522 aa20.22■□□□□ 0.83
PHF1-211ENST00000495509 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
PHF1-211ENST00000495509 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
PHF1-211ENST00000495509 DOT1LQ8TEK3 1739 aa20.21■□□□□ 0.83
PHF1-211ENST00000495509 KCNQ2O43526 872 aa20.2■□□□□ 0.82
PHF1-211ENST00000495509 RXRBP28702 533 aa20.2■□□□□ 0.82
PHF1-211ENST00000495509 ZNF496Q96IT1 587 aaPredicted RBP20.2■□□□□ 0.82
PHF1-211ENST00000495509 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
PHF1-211ENST00000495509 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
PHF1-211ENST00000495509 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
PHF1-211ENST00000495509 IRX6P78412 446 aaPredicted RBP20.19■□□□□ 0.82
PHF1-211ENST00000495509 BCL9O00512 1426 aa20.19■□□□□ 0.82
PHF1-211ENST00000495509 RRP1P56182 461 aaKnown RBP20.18■□□□□ 0.82
PHF1-211ENST00000495509 TTC5Q8N0Z6 440 aa20.18■□□□□ 0.82
PHF1-211ENST00000495509 NECTIN2Q92692 538 aa20.18■□□□□ 0.82
PHF1-211ENST00000495509 HEG1Q9ULI3 1381 aa20.18■□□□□ 0.82
PHF1-211ENST00000495509 GIGYF1O75420 1035 aaPredicted RBP20.18■□□□□ 0.82
PHF1-211ENST00000495509 ATG3Q9NT62 314 aa20.18■□□□□ 0.82
PHF1-211ENST00000495509 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
PHF1-211ENST00000495509 PTF1AQ7RTS3 328 aa20.17■□□□□ 0.82
PHF1-211ENST00000495509 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
PHF1-211ENST00000495509 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
PHF1-211ENST00000495509 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
PHF1-211ENST00000495509 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
PHF1-211ENST00000495509 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
PHF1-211ENST00000495509 KRT27Q7Z3Y8 459 aa20.15■□□□□ 0.82
PHF1-211ENST00000495509 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
PHF1-211ENST00000495509 FMNL2Q96PY5 1086 aa20.15■□□□□ 0.82
PHF1-211ENST00000495509 PAPPAQ13219 1627 aa20.14■□□□□ 0.82
PHF1-211ENST00000495509 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
PHF1-211ENST00000495509 C20orf194Q5TEA3 1177 aa20.13■□□□□ 0.81
PHF1-211ENST00000495509 HDGFL1Q5TGJ6 251 aa20.13■□□□□ 0.81
PHF1-211ENST00000495509 USP16Q9Y5T5 823 aa20.13■□□□□ 0.81
PHF1-211ENST00000495509 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
PHF1-211ENST00000495509 HOXB7P09629 217 aa20.12■□□□□ 0.81
PHF1-211ENST00000495509 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
PHF1-211ENST00000495509 TNNQ9UQP3 1299 aa20.12■□□□□ 0.81
PHF1-211ENST00000495509 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
PHF1-211ENST00000495509 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
PHF1-211ENST00000495509 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
PHF1-211ENST00000495509 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
PHF1-211ENST00000495509 RBM42Q9BTD8 480 aaKnown RBP20.11■□□□□ 0.81
PHF1-211ENST00000495509 C5P01031 1676 aa20.11■□□□□ 0.81
PHF1-211ENST00000495509 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
PHF1-211ENST00000495509 FKBP8Q14318 412 aa20.11■□□□□ 0.81
PHF1-211ENST00000495509 EP400Q96L91 3159 aa20.11■□□□□ 0.81
PHF1-211ENST00000495509 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
PHF1-211ENST00000495509 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
PHF1-211ENST00000495509 RGS12O14924 1447 aa20.1■□□□□ 0.81
PHF1-211ENST00000495509 G2E3Q7L622 706 aa20.09■□□□□ 0.81
PHF1-211ENST00000495509 ANXA1P04083 346 aa20.08■□□□□ 0.81
PHF1-211ENST00000495509 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
PHF1-211ENST00000495509 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.81
PHF1-211ENST00000495509 CHPF2Q9P2E5 772 aa20.08■□□□□ 0.81
PHF1-211ENST00000495509 NEFLP07196 543 aa20.08■□□□□ 0.8
PHF1-211ENST00000495509 STK31Q9BXU1 1019 aa20.08■□□□□ 0.8
PHF1-211ENST00000495509 FAM196AQ6ZSG2 479 aa20.07■□□□□ 0.8
PHF1-211ENST00000495509 PROSER3Q2NL68 480 aa20.06■□□□□ 0.8
PHF1-211ENST00000495509 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
PHF1-211ENST00000495509 CLUAP1Q96AJ1 413 aa20.06■□□□□ 0.8
PHF1-211ENST00000495509 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
PHF1-211ENST00000495509 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
PHF1-211ENST00000495509 NHSQ6T4R5 1651 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms