RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 NUCKS1Q9H1E3 243 aaKnown RBP11.37□□□□□ -0.59
RPSA-209ENST00000495394 ESF1Q9H501 851 aaKnown RBP11.37□□□□□ -0.59
RPSA-209ENST00000495394 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 CAMSAP1Q5T5Y3 1602 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 KANK1Q14678 1352 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 C3P01024 1663 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 ABCC3O15438 1527 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 SWAP70Q9UH65 585 aa11.37□□□□□ -0.59
RPSA-209ENST00000495394 TPM3P06753 285 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 C1orf131Q8NDD1 294 aaKnown RBP11.36□□□□□ -0.59
RPSA-209ENST00000495394 MNS1Q8NEH6 495 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 UBXN4Q92575 508 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 ZBTB9Q96C00 473 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 C22orf23Q9BZE7 217 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 RSPH9Q9H1X1 276 aaPredicted RBP11.36□□□□□ -0.59
RPSA-209ENST00000495394 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 ESPNB1AK53 854 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 CASQ1P31415 396 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 RSPH1Q8WYR4 309 aa11.36□□□□□ -0.59
RPSA-209ENST00000495394 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
RPSA-209ENST00000495394 PTPRTO14522 1441 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 TET3O43151 1660 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 IPO5O00410 1097 aaKnown RBP11.35□□□□□ -0.59
RPSA-209ENST00000495394 IGHDP01880 384 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 MFSD4BQ5TF39 518 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
RPSA-209ENST00000495394 SUN2Q9UH99 717 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 STRCQ7RTU9 1775 aa11.35□□□□□ -0.59
RPSA-209ENST00000495394 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
RPSA-209ENST00000495394 DCAF11Q8TEB1 546 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 MRRFQ96E11 262 aaKnown RBP11.34□□□□□ -0.59
RPSA-209ENST00000495394 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.34□□□□□ -0.59
RPSA-209ENST00000495394 VDRP11473 427 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 IFT88Q13099 833 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 HSP90B2PQ58FF3 399 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 L1TD1Q5T7N2 865 aaKnown RBP11.34□□□□□ -0.59
RPSA-209ENST00000495394 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 FRAT1Q92837 279 aaPredicted RBP11.34□□□□□ -0.59
RPSA-209ENST00000495394 CXorf56Q9H5V9 222 aa11.34□□□□□ -0.59
RPSA-209ENST00000495394 EFCAB6Q5THR3 1501 aa11.33□□□□□ -0.6
RPSA-209ENST00000495394 PPP1R15AO75807 674 aaPredicted RBP11.33□□□□□ -0.6
RPSA-209ENST00000495394 C11orf91Q3C1V1 193 aa11.33□□□□□ -0.6
RPSA-209ENST00000495394 GJC2Q5T442 439 aaPredicted RBP11.33□□□□□ -0.6
RPSA-209ENST00000495394 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
RPSA-209ENST00000495394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.33□□□□□ -0.6
RPSA-209ENST00000495394 MAP3K20Q9NYL2 800 aaKnown RBP11.33□□□□□ -0.6
RPSA-209ENST00000495394 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
RPSA-209ENST00000495394 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 UHRF1BP1Q6BDS2 1440 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 SKILP12757 684 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 ERCC4Q92889 916 aaPredicted RBP11.32□□□□□ -0.6
RPSA-209ENST00000495394 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 NUP155O75694 1391 aa11.32□□□□□ -0.6
RPSA-209ENST00000495394 PZPP20742 1482 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 BICDL2A1A5D9 508 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
RPSA-209ENST00000495394 PSME1Q06323 249 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 INO80BQ9C086 356 aaPredicted RBP11.31□□□□□ -0.6
RPSA-209ENST00000495394 ZMYM3Q14202 1370 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 TONSLQ96HA7 1378 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 SBNO2Q9Y2G9 1366 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 ARHGAP31Q2M1Z3 1444 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 TULP2O00295 520 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 KCNJ4P48050 445 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 BIRC2Q13490 618 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 KNSTRNQ9Y448 316 aa11.31□□□□□ -0.6
RPSA-209ENST00000495394 SETD1BQ9UPS6 1966 aaKnown RBP11.31□□□□□ -0.6
RPSA-209ENST00000495394 E9PCH4 1651 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 KAT6BQ8WYB5 2073 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
RPSA-209ENST00000495394 SCYL1Q96KG9 808 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 CHPF2Q9P2E5 772 aa11.3□□□□□ -0.6
RPSA-209ENST00000495394 RPRD2Q5VT52 1461 aaKnown RBP11.3□□□□□ -0.6
RPSA-209ENST00000495394 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 LTBP4Q8N2S1 1624 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 HMMRO75330 724 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 SEZ6LQ9BYH1 1024 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 RETREG1Q9H6L5 497 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
RPSA-209ENST00000495394 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
RPSA-209ENST00000495394 NPATQ14207 1427 aa11.29□□□□□ -0.6
RPSA-209ENST00000495394 NAT2P11245 290 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPSA-209ENST00000495394 PSMD2Q13200 908 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 C16orf87Q6PH81 154 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms