RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-213ENST00000495232 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
CSNK1E-213ENST00000495232 LY75O60449 1722 aa15.92■□□□□ 0.14
CSNK1E-213ENST00000495232 RIPK4P57078 832 aa15.92■□□□□ 0.14
CSNK1E-213ENST00000495232 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
CSNK1E-213ENST00000495232 MCM10Q7L590 875 aa15.92■□□□□ 0.14
CSNK1E-213ENST00000495232 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-213ENST00000495232 ATG3Q9NT62 314 aa15.92■□□□□ 0.14
CSNK1E-213ENST00000495232 NUP188Q5SRE5 1749 aa15.91■□□□□ 0.14
CSNK1E-213ENST00000495232 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-213ENST00000495232 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
CSNK1E-213ENST00000495232 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-213ENST00000495232 DLG5Q8TDM6 1919 aa15.91■□□□□ 0.14
CSNK1E-213ENST00000495232 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
CSNK1E-213ENST00000495232 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
CSNK1E-213ENST00000495232 SIK1P57059 783 aa15.9■□□□□ 0.14
CSNK1E-213ENST00000495232 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
CSNK1E-213ENST00000495232 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
CSNK1E-213ENST00000495232 STK32BQ9NY57 414 aa15.9■□□□□ 0.14
CSNK1E-213ENST00000495232 MRC1P22897 1456 aa15.9■□□□□ 0.14
CSNK1E-213ENST00000495232 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
CSNK1E-213ENST00000495232 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
CSNK1E-213ENST00000495232 KCNQ4P56696 695 aa15.89■□□□□ 0.13
CSNK1E-213ENST00000495232 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
CSNK1E-213ENST00000495232 LRRC4BQ9NT99 713 aa15.89■□□□□ 0.13
CSNK1E-213ENST00000495232 RRP7AQ9Y3A4 280 aaKnown RBP15.89■□□□□ 0.13
CSNK1E-213ENST00000495232 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
CSNK1E-213ENST00000495232 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
CSNK1E-213ENST00000495232 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
CSNK1E-213ENST00000495232 APAF1O14727 1248 aa15.87■□□□□ 0.13
CSNK1E-213ENST00000495232 SLC39A6Q13433 755 aa15.87■□□□□ 0.13
CSNK1E-213ENST00000495232 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-213ENST00000495232 PSDA5PKW4 1024 aaPredicted RBP15.86■□□□□ 0.13
CSNK1E-213ENST00000495232 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
CSNK1E-213ENST00000495232 SLC15A2Q16348 729 aa15.86■□□□□ 0.13
CSNK1E-213ENST00000495232 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
CSNK1E-213ENST00000495232 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-213ENST00000495232 C5P01031 1676 aa15.84■□□□□ 0.13
CSNK1E-213ENST00000495232 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-213ENST00000495232 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-213ENST00000495232 TFCP2L1Q9NZI6 479 aa15.84■□□□□ 0.13
CSNK1E-213ENST00000495232 PAPPAQ13219 1627 aa15.83■□□□□ 0.13
CSNK1E-213ENST00000495232 MIER1Q8N108 512 aa15.83■□□□□ 0.12
CSNK1E-213ENST00000495232 AK7Q96M32 723 aa15.83■□□□□ 0.12
CSNK1E-213ENST00000495232 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
CSNK1E-213ENST00000495232 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
CSNK1E-213ENST00000495232 ZNF831Q5JPB2 1677 aa15.82■□□□□ 0.12
CSNK1E-213ENST00000495232 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 ITPK1Q13572 414 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 ZNF827Q17R98 1081 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
CSNK1E-213ENST00000495232 C4BP0C0L5 1744 aa15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 SLC4A9Q96Q91 983 aa15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 TSPYL4Q9UJ04 414 aa15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
CSNK1E-213ENST00000495232 KCPQ6ZWJ8 1503 aa15.79■□□□□ 0.12
CSNK1E-213ENST00000495232 MSH5O43196 834 aa15.79■□□□□ 0.12
CSNK1E-213ENST00000495232 STARD3NLO95772 234 aa15.79■□□□□ 0.12
CSNK1E-213ENST00000495232 BABAM1Q9NWV8 329 aa15.79■□□□□ 0.12
CSNK1E-213ENST00000495232 HEG1Q9ULI3 1381 aa15.78■□□□□ 0.12
CSNK1E-213ENST00000495232 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
CSNK1E-213ENST00000495232 GNPATO15228 680 aa15.78■□□□□ 0.12
CSNK1E-213ENST00000495232 KCNQ3O43525 872 aa15.78■□□□□ 0.12
CSNK1E-213ENST00000495232 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
CSNK1E-213ENST00000495232 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
CSNK1E-213ENST00000495232 CNTNAP4Q9C0A0 1308 aa15.77■□□□□ 0.12
CSNK1E-213ENST00000495232 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-213ENST00000495232 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-213ENST00000495232 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-213ENST00000495232 COL5A3P25940 1745 aaPredicted RBP15.77■□□□□ 0.11
CSNK1E-213ENST00000495232 PHF14O94880 888 aa15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 CCDC27Q2M243 656 aa15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 NGEFQ8N5V2 710 aa15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 TJP1Q07157 1748 aa15.76■□□□□ 0.11
CSNK1E-213ENST00000495232 KDM3BQ7LBC6 1761 aa15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 PNPLA7Q6ZV29 1317 aa15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 QSER1Q2KHR3 1735 aa15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 SSFA2P28290 1259 aa15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 CCDC87Q9NVE4 849 aa15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 CICQ96RK0 1608 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-213ENST00000495232 TUBGCP6Q96RT7 1819 aa15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 CYP19A1P11511 503 aaPredicted RBP15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 GNAI1P63096 354 aa15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 TRAPPC3LQ5T215 181 aa15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
CSNK1E-213ENST00000495232 CHL1O00533 1208 aa15.73■□□□□ 0.11
CSNK1E-213ENST00000495232 RPS6KA4O75676 772 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms