RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 PIM2Q9P1W9 311 aa21.14■□□□□ 0.97
CHMP2B-205ENST00000494980 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
CHMP2B-205ENST00000494980 EVC2Q86UK5 1308 aa21.13■□□□□ 0.97
CHMP2B-205ENST00000494980 GLTPD2A6NH11 291 aa21.12■□□□□ 0.97
CHMP2B-205ENST00000494980 IP6K1Q92551 441 aa21.12■□□□□ 0.97
CHMP2B-205ENST00000494980 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
CHMP2B-205ENST00000494980 KDM6AO15550 1401 aaPredicted RBP21.11■□□□□ 0.97
CHMP2B-205ENST00000494980 HSPA8P11142 646 aaKnown RBP21.1■□□□□ 0.97
CHMP2B-205ENST00000494980 RASSF7Q02833 373 aa21.1■□□□□ 0.97
CHMP2B-205ENST00000494980 WBP1LQ9NX94 342 aa21.1■□□□□ 0.97
CHMP2B-205ENST00000494980 VEGFBP49765 207 aa21.08■□□□□ 0.97
CHMP2B-205ENST00000494980 TMF1P82094 1093 aa21.08■□□□□ 0.97
CHMP2B-205ENST00000494980 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
CHMP2B-205ENST00000494980 LOC102724428A0A0B4J2F2 783 aa21.06■□□□□ 0.96
CHMP2B-205ENST00000494980 POTECB2RU33 542 aa21.06■□□□□ 0.96
CHMP2B-205ENST00000494980 SIK1P57059 783 aa21.06■□□□□ 0.96
CHMP2B-205ENST00000494980 PARP3Q9Y6F1 533 aa21.05■□□□□ 0.96
CHMP2B-205ENST00000494980 SBNO2Q9Y2G9 1366 aa21.05■□□□□ 0.96
CHMP2B-205ENST00000494980 CHADLQ6NUI6 762 aa21.04■□□□□ 0.96
CHMP2B-205ENST00000494980 CFAP44Q96MT7 982 aa21.04■□□□□ 0.96
CHMP2B-205ENST00000494980 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
CHMP2B-205ENST00000494980 PCDH11XQ9BZA7 1347 aa21.04■□□□□ 0.96
CHMP2B-205ENST00000494980 PCDH11YQ9BZA8 1340 aa21.04■□□□□ 0.96
CHMP2B-205ENST00000494980 LMNB1P20700 586 aa21.03■□□□□ 0.96
CHMP2B-205ENST00000494980 ITPK1Q13572 414 aa21.03■□□□□ 0.96
CHMP2B-205ENST00000494980 CHRNA5P30532 468 aa21.02■□□□□ 0.96
CHMP2B-205ENST00000494980 USHBP1Q8N6Y0 703 aa21.02■□□□□ 0.96
CHMP2B-205ENST00000494980 PIGBQ92521 554 aa21.01■□□□□ 0.95
CHMP2B-205ENST00000494980 GYS1P13807 737 aa21■□□□□ 0.95
CHMP2B-205ENST00000494980 TRAPPC3LQ5T215 181 aa21■□□□□ 0.95
CHMP2B-205ENST00000494980 RAPGEF4Q8WZA2 1011 aa21■□□□□ 0.95
CHMP2B-205ENST00000494980 CD163L1Q9NR16 1453 aa21■□□□□ 0.95
CHMP2B-205ENST00000494980 POTEIP0CG38 1075 aa20.99■□□□□ 0.95
CHMP2B-205ENST00000494980 POTEJP0CG39 1038 aa20.99■□□□□ 0.95
CHMP2B-205ENST00000494980 HOXC9P31274 260 aa20.99■□□□□ 0.95
CHMP2B-205ENST00000494980 ATP6V1AP38606 617 aa20.98■□□□□ 0.95
CHMP2B-205ENST00000494980 RTCBQ9Y3I0 505 aaKnown RBP20.98■□□□□ 0.95
CHMP2B-205ENST00000494980 NBPF6Q5VWK0 638 aa20.97■□□□□ 0.95
CHMP2B-205ENST00000494980 NBPF4Q96M43 638 aa20.97■□□□□ 0.95
CHMP2B-205ENST00000494980 MAP3K19Q56UN5 1328 aa20.97■□□□□ 0.95
CHMP2B-205ENST00000494980 PASKQ96RG2 1323 aa20.97■□□□□ 0.95
CHMP2B-205ENST00000494980 CYP27B1O15528 508 aa20.96■□□□□ 0.95
CHMP2B-205ENST00000494980 TATP17735 454 aaPredicted RBP20.96■□□□□ 0.95
CHMP2B-205ENST00000494980 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
CHMP2B-205ENST00000494980 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
CHMP2B-205ENST00000494980 EDC4Q6P2E9 1401 aaKnown RBP20.95■□□□□ 0.94
CHMP2B-205ENST00000494980 AMPHP49418 695 aa20.94■□□□□ 0.94
CHMP2B-205ENST00000494980 COL5A3P25940 1745 aaPredicted RBP20.93■□□□□ 0.94
CHMP2B-205ENST00000494980 DLEC1Q9Y238 1755 aa20.93■□□□□ 0.94
CHMP2B-205ENST00000494980 TMEM88BA6NKF7 163 aa20.93■□□□□ 0.94
CHMP2B-205ENST00000494980 MAP2K1Q02750 393 aaPredicted RBP20.93■□□□□ 0.94
CHMP2B-205ENST00000494980 DPY19L2Q6NUT2 758 aa20.93■□□□□ 0.94
CHMP2B-205ENST00000494980 ADRA2BP18089 450 aa20.92■□□□□ 0.94
CHMP2B-205ENST00000494980 RFC4P35249 363 aa20.92■□□□□ 0.94
CHMP2B-205ENST00000494980 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
CHMP2B-205ENST00000494980 MYH14Q7Z406 1995 aaKnown RBP20.9■□□□□ 0.94
CHMP2B-205ENST00000494980 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
CHMP2B-205ENST00000494980 DDR1Q08345 913 aa20.9■□□□□ 0.94
CHMP2B-205ENST00000494980 THSD7BQ9C0I4 1608 aa20.89■□□□□ 0.94
CHMP2B-205ENST00000494980 FBLN1P23142 703 aa20.89■□□□□ 0.93
CHMP2B-205ENST00000494980 NFKBIEO00221 500 aa20.88■□□□□ 0.93
CHMP2B-205ENST00000494980 TMOD3Q9NYL9 352 aa20.88■□□□□ 0.93
CHMP2B-205ENST00000494980 SMG6Q86US8 1419 aaKnown RBP20.87■□□□□ 0.93
CHMP2B-205ENST00000494980 KDRP35968 1356 aa20.87■□□□□ 0.93
CHMP2B-205ENST00000494980 WDR33Q9C0J8 1336 aaKnown RBP20.87■□□□□ 0.93
CHMP2B-205ENST00000494980 CASP8AP2Q9UKL3 1982 aa20.87■□□□□ 0.93
CHMP2B-205ENST00000494980 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
CHMP2B-205ENST00000494980 HDGFL2Q7Z4V5 671 aaPredicted RBP20.87■□□□□ 0.93
CHMP2B-205ENST00000494980 ZNF831Q5JPB2 1677 aa20.86■□□□□ 0.93
CHMP2B-205ENST00000494980 RTL1A6NKG5 1358 aa20.86■□□□□ 0.93
CHMP2B-205ENST00000494980 MCOLN1Q9GZU1 580 aa20.86■□□□□ 0.93
CHMP2B-205ENST00000494980 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
CHMP2B-205ENST00000494980 FKBP8Q14318 412 aa20.85■□□□□ 0.93
CHMP2B-205ENST00000494980 DEFB115Q30KQ5 88 aa20.85■□□□□ 0.93
CHMP2B-205ENST00000494980 LDHDQ86WU2 507 aa20.85■□□□□ 0.93
CHMP2B-205ENST00000494980 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
CHMP2B-205ENST00000494980 SCN4AP35499 1836 aa20.84■□□□□ 0.93
CHMP2B-205ENST00000494980 PRPF38BQ5VTL8 546 aaKnown RBP20.84■□□□□ 0.93
CHMP2B-205ENST00000494980 SRP68Q9UHB9 627 aaKnown RBP20.84■□□□□ 0.93
CHMP2B-205ENST00000494980 LTBP1Q14766 1721 aa20.84■□□□□ 0.93
CHMP2B-205ENST00000494980 A0A1W2PP64 1363 aa20.84■□□□□ 0.93
CHMP2B-205ENST00000494980 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
CHMP2B-205ENST00000494980 BEGAINQ9BUH8 593 aa20.83■□□□□ 0.93
CHMP2B-205ENST00000494980 ATG3Q9NT62 314 aa20.83■□□□□ 0.93
CHMP2B-205ENST00000494980 FER1L6Q2WGJ9 1857 aa20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 RPS6KA4O75676 772 aa20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 ITGBL1O95965 494 aaPredicted RBP20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 NKX1-1Q15270 411 aaPredicted RBP20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 ERFEQ4G0M1 354 aa20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 RC3H1Q5TC82 1133 aaKnown RBP20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 TSKSQ9UJT2 592 aa20.82■□□□□ 0.92
CHMP2B-205ENST00000494980 DDNO94850 711 aaPredicted RBP20.81■□□□□ 0.92
CHMP2B-205ENST00000494980 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
CHMP2B-205ENST00000494980 POLRMTO00411 1230 aaKnown RBP20.8■□□□□ 0.92
CHMP2B-205ENST00000494980 TTLL6Q8N841 843 aa20.8■□□□□ 0.92
CHMP2B-205ENST00000494980 COG3Q96JB2 828 aa20.8■□□□□ 0.92
CHMP2B-205ENST00000494980 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
CHMP2B-205ENST00000494980 RRS1Q15050 365 aaKnown RBP20.79■□□□□ 0.92
CHMP2B-205ENST00000494980 ABT1Q9ULW3 272 aaKnown RBP20.79■□□□□ 0.92
CHMP2B-205ENST00000494980 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms