RNA–Protein interactions for RNA: ENST00000494939.1

MKRN1-213, Transcript of makorin ring finger protein 1, humanhuman

TSL 3

Gene MKRN1, Length 784 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-213ENST00000494939 HMOX1P09601 288 aa11.22□□□□□ -0.61
MKRN1-213ENST00000494939 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
MKRN1-213ENST00000494939 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
MKRN1-213ENST00000494939 TFCP2L1Q9NZI6 479 aa11.22□□□□□ -0.61
MKRN1-213ENST00000494939 PPP1R1BQ9UD71 204 aaPredicted RBP11.22□□□□□ -0.61
MKRN1-213ENST00000494939 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
MKRN1-213ENST00000494939 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
MKRN1-213ENST00000494939 ZNF831Q5JPB2 1677 aa11.21□□□□□ -0.61
MKRN1-213ENST00000494939 ADAMTS7Q9UKP4 1686 aa11.21□□□□□ -0.61
MKRN1-213ENST00000494939 MRC1P22897 1456 aa11.21□□□□□ -0.61
MKRN1-213ENST00000494939 ATG3Q9NT62 314 aa11.21□□□□□ -0.61
MKRN1-213ENST00000494939 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.61
MKRN1-213ENST00000494939 LOC102724428A0A0B4J2F2 783 aa11.2□□□□□ -0.62
MKRN1-213ENST00000494939 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
MKRN1-213ENST00000494939 DSG3P32926 999 aa11.2□□□□□ -0.62
MKRN1-213ENST00000494939 SIK1P57059 783 aa11.2□□□□□ -0.62
MKRN1-213ENST00000494939 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
MKRN1-213ENST00000494939 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
MKRN1-213ENST00000494939 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
MKRN1-213ENST00000494939 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
MKRN1-213ENST00000494939 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
MKRN1-213ENST00000494939 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
MKRN1-213ENST00000494939 U2SURPO15042 1029 aaKnown RBP11.18□□□□□ -0.62
MKRN1-213ENST00000494939 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
MKRN1-213ENST00000494939 CABP4P57796 275 aa11.18□□□□□ -0.62
MKRN1-213ENST00000494939 ITPK1Q13572 414 aa11.18□□□□□ -0.62
MKRN1-213ENST00000494939 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
MKRN1-213ENST00000494939 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
MKRN1-213ENST00000494939 LINC00116Q8NCU8 138 aa11.18□□□□□ -0.62
MKRN1-213ENST00000494939 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
MKRN1-213ENST00000494939 UTRNP46939 3433 aa11.18□□□□□ -0.62
MKRN1-213ENST00000494939 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
MKRN1-213ENST00000494939 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
MKRN1-213ENST00000494939 AMIGO3Q86WK7 504 aa11.17□□□□□ -0.62
MKRN1-213ENST00000494939 AK7Q96M32 723 aa11.17□□□□□ -0.62
MKRN1-213ENST00000494939 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
MKRN1-213ENST00000494939 MAP3K5Q99683 1374 aa11.16□□□□□ -0.62
MKRN1-213ENST00000494939 TJP1Q07157 1748 aa11.16□□□□□ -0.62
MKRN1-213ENST00000494939 NFATC2IPQ8NCF5 419 aa11.16□□□□□ -0.62
MKRN1-213ENST00000494939 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
MKRN1-213ENST00000494939 ARXQ96QS3 562 aa11.16□□□□□ -0.62
MKRN1-213ENST00000494939 RNMTO43148 476 aaKnown RBP11.15□□□□□ -0.62
MKRN1-213ENST00000494939 SSFA2P28290 1259 aa11.15□□□□□ -0.62
MKRN1-213ENST00000494939 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
MKRN1-213ENST00000494939 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
MKRN1-213ENST00000494939 RSPH6AQ9H0K4 717 aa11.15□□□□□ -0.62
MKRN1-213ENST00000494939 SLC52A2Q9HAB3 445 aa11.15□□□□□ -0.62
MKRN1-213ENST00000494939 LGR6Q9HBX8 967 aa11.15□□□□□ -0.62
MKRN1-213ENST00000494939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
MKRN1-213ENST00000494939 PHF14O94880 888 aa11.14□□□□□ -0.63
MKRN1-213ENST00000494939 POLD1P28340 1107 aa11.14□□□□□ -0.63
MKRN1-213ENST00000494939 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
MKRN1-213ENST00000494939 SYT17Q9BSW7 474 aa11.14□□□□□ -0.63
MKRN1-213ENST00000494939 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
MKRN1-213ENST00000494939 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
MKRN1-213ENST00000494939 GNPATO15228 680 aa11.13□□□□□ -0.63
MKRN1-213ENST00000494939 PRKAR2BP31323 418 aa11.13□□□□□ -0.63
MKRN1-213ENST00000494939 SMIM5Q71RC9 77 aa11.13□□□□□ -0.63
MKRN1-213ENST00000494939 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
MKRN1-213ENST00000494939 UBR2Q8IWV8 1755 aa11.13□□□□□ -0.63
MKRN1-213ENST00000494939 CNTNAP4Q9C0A0 1308 aa11.12□□□□□ -0.63
MKRN1-213ENST00000494939 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
MKRN1-213ENST00000494939 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
MKRN1-213ENST00000494939 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.63
MKRN1-213ENST00000494939 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
MKRN1-213ENST00000494939 PHACTR3Q96KR7 559 aa11.12□□□□□ -0.63
MKRN1-213ENST00000494939 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
MKRN1-213ENST00000494939 DDX10Q13206 875 aaKnown RBP11.11□□□□□ -0.63
MKRN1-213ENST00000494939 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
MKRN1-213ENST00000494939 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
MKRN1-213ENST00000494939 CEMIPQ8WUJ3 1361 aa11.11□□□□□ -0.63
MKRN1-213ENST00000494939 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
MKRN1-213ENST00000494939 FCHSD2O94868 740 aa11.1□□□□□ -0.63
MKRN1-213ENST00000494939 SLC39A6Q13433 755 aa11.1□□□□□ -0.63
MKRN1-213ENST00000494939 IL17REQ8NFR9 667 aa11.1□□□□□ -0.63
MKRN1-213ENST00000494939 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
MKRN1-213ENST00000494939 GOLGB1Q14789 3259 aaKnown RBP11.1□□□□□ -0.63
MKRN1-213ENST00000494939 RALBP1Q15311 655 aa11.09□□□□□ -0.63
MKRN1-213ENST00000494939 RPS6KA4O75676 772 aa11.08□□□□□ -0.64
MKRN1-213ENST00000494939 CRKLP46109 303 aaKnown RBP11.08□□□□□ -0.64
MKRN1-213ENST00000494939 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
MKRN1-213ENST00000494939 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
MKRN1-213ENST00000494939 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
MKRN1-213ENST00000494939 TEFQ10587 303 aa11.07□□□□□ -0.64
MKRN1-213ENST00000494939 INTS5Q6P9B9 1019 aaKnown RBP11.07□□□□□ -0.64
MKRN1-213ENST00000494939 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
MKRN1-213ENST00000494939 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
MKRN1-213ENST00000494939 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
MKRN1-213ENST00000494939 CYP19A1P11511 503 aaPredicted RBP11.06□□□□□ -0.64
MKRN1-213ENST00000494939 ZNF790Q6PG37 636 aa11.06□□□□□ -0.64
MKRN1-213ENST00000494939 TTC5Q8N0Z6 440 aa11.06□□□□□ -0.64
MKRN1-213ENST00000494939 PLEKHF1Q96S99 279 aa11.06□□□□□ -0.64
MKRN1-213ENST00000494939 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
MKRN1-213ENST00000494939 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
MKRN1-213ENST00000494939 GYS1P13807 737 aa11.05□□□□□ -0.64
MKRN1-213ENST00000494939 RFC4P35249 363 aa11.05□□□□□ -0.64
MKRN1-213ENST00000494939 MCM10Q7L590 875 aa11.05□□□□□ -0.64
MKRN1-213ENST00000494939 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
MKRN1-213ENST00000494939 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
MKRN1-213ENST00000494939 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms