RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
SAMM50-206ENST00000494795 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
SAMM50-206ENST00000494795 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
SAMM50-206ENST00000494795 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
SAMM50-206ENST00000494795 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
SAMM50-206ENST00000494795 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
SAMM50-206ENST00000494795 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
SAMM50-206ENST00000494795 SLC39A6Q13433 755 aa13.04□□□□□ -0.32
SAMM50-206ENST00000494795 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
SAMM50-206ENST00000494795 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-206ENST00000494795 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 TBC1D32Q96NH3 1257 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 ERBB3P21860 1342 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 SLIT3O75094 1523 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 PTPRCP08575 1304 aa13.03□□□□□ -0.32
SAMM50-206ENST00000494795 BTBD11A6QL63 1104 aa13.02□□□□□ -0.32
SAMM50-206ENST00000494795 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.32
SAMM50-206ENST00000494795 PIP4K2AP48426 406 aaPredicted RBP13.02□□□□□ -0.32
SAMM50-206ENST00000494795 ANKRD44Q8N8A2 993 aa13.02□□□□□ -0.32
SAMM50-206ENST00000494795 STK31Q9BXU1 1019 aa13.02□□□□□ -0.32
SAMM50-206ENST00000494795 DCTPP1Q9H773 170 aa13.02□□□□□ -0.32
SAMM50-206ENST00000494795 EXOC6BQ9Y2D4 811 aa13.02□□□□□ -0.32
SAMM50-206ENST00000494795 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-206ENST00000494795 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
SAMM50-206ENST00000494795 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
SAMM50-206ENST00000494795 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
SAMM50-206ENST00000494795 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
SAMM50-206ENST00000494795 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
SAMM50-206ENST00000494795 TEFQ10587 303 aa13□□□□□ -0.33
SAMM50-206ENST00000494795 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
SAMM50-206ENST00000494795 BRINP3Q76B58 766 aa13□□□□□ -0.33
SAMM50-206ENST00000494795 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
SAMM50-206ENST00000494795 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
SAMM50-206ENST00000494795 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
SAMM50-206ENST00000494795 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
SAMM50-206ENST00000494795 USP44Q9H0E7 712 aa12.99□□□□□ -0.33
SAMM50-206ENST00000494795 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
SAMM50-206ENST00000494795 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
SAMM50-206ENST00000494795 TBC1D9Q6ZT07 1266 aa12.99□□□□□ -0.33
SAMM50-206ENST00000494795 NBPF7P0C2Y1 421 aaPredicted RBP12.98□□□□□ -0.33
SAMM50-206ENST00000494795 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
SAMM50-206ENST00000494795 MEGF6O75095 1541 aa12.98□□□□□ -0.33
SAMM50-206ENST00000494795 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
SAMM50-206ENST00000494795 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
SAMM50-206ENST00000494795 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
SAMM50-206ENST00000494795 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
SAMM50-206ENST00000494795 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
SAMM50-206ENST00000494795 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
SAMM50-206ENST00000494795 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
SAMM50-206ENST00000494795 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.33
SAMM50-206ENST00000494795 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
SAMM50-206ENST00000494795 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.33
SAMM50-206ENST00000494795 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.34
SAMM50-206ENST00000494795 PHRF1Q9P1Y6 1649 aaKnown RBP12.96□□□□□ -0.34
SAMM50-206ENST00000494795 CYP27B1O15528 508 aa12.96□□□□□ -0.34
SAMM50-206ENST00000494795 FRAT2O75474 233 aaPredicted RBP12.96□□□□□ -0.34
SAMM50-206ENST00000494795 CCT4P50991 539 aaKnown RBP12.96□□□□□ -0.34
SAMM50-206ENST00000494795 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.34
SAMM50-206ENST00000494795 NFKBIBQ15653 356 aa12.96□□□□□ -0.34
SAMM50-206ENST00000494795 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.34
SAMM50-206ENST00000494795 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
SAMM50-206ENST00000494795 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
SAMM50-206ENST00000494795 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
SAMM50-206ENST00000494795 NCAPD2Q15021 1401 aa12.95□□□□□ -0.34
SAMM50-206ENST00000494795 CWF19L2Q2TBE0 894 aaKnown RBP12.95□□□□□ -0.34
SAMM50-206ENST00000494795 KIF2CQ99661 725 aa12.95□□□□□ -0.34
SAMM50-206ENST00000494795 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
SAMM50-206ENST00000494795 GNAI2P04899 355 aa12.94□□□□□ -0.34
SAMM50-206ENST00000494795 IL1RAPL2Q9NP60 686 aa12.94□□□□□ -0.34
SAMM50-206ENST00000494795 ADCY9O60503 1353 aa12.94□□□□□ -0.34
SAMM50-206ENST00000494795 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
SAMM50-206ENST00000494795 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
SAMM50-206ENST00000494795 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
SAMM50-206ENST00000494795 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
SAMM50-206ENST00000494795 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
SAMM50-206ENST00000494795 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
SAMM50-206ENST00000494795 KDM3BQ7LBC6 1761 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 SDSP20132 328 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 SLAIN2Q9P270 581 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 MYL6BP14649 208 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 PHKG2P15735 406 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
SAMM50-206ENST00000494795 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
SAMM50-206ENST00000494795 COL18A1P39060 1754 aa12.92□□□□□ -0.34
SAMM50-206ENST00000494795 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
SAMM50-206ENST00000494795 PDIA6Q15084 440 aa12.92□□□□□ -0.34
SAMM50-206ENST00000494795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.92□□□□□ -0.34
SAMM50-206ENST00000494795 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
SAMM50-206ENST00000494795 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
SAMM50-206ENST00000494795 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
SAMM50-206ENST00000494795 PPP1R42Q7Z4L9 355 aa12.91□□□□□ -0.34
SAMM50-206ENST00000494795 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
SAMM50-206ENST00000494795 DNAAF4Q8WXU2 420 aa12.91□□□□□ -0.34
SAMM50-206ENST00000494795 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
SAMM50-206ENST00000494795 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms