RNA–Protein interactions for RNA: ENST00000494570.1

KDM4C-211, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-211ENST00000494570 CC2D1BQ5T0F9 858 aaKnown RBP11.22□□□□□ -0.61
KDM4C-211ENST00000494570 ZCRB1Q8TBF4 217 aaKnown RBP11.22□□□□□ -0.61
KDM4C-211ENST00000494570 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
KDM4C-211ENST00000494570 IL13P35225 146 aa11.21□□□□□ -0.61
KDM4C-211ENST00000494570 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
KDM4C-211ENST00000494570 PCDHB8Q9UN66 801 aa11.21□□□□□ -0.61
KDM4C-211ENST00000494570 COLQQ9Y215 455 aaPredicted RBP11.21□□□□□ -0.61
KDM4C-211ENST00000494570 WNK3Q9BYP7 1800 aa11.21□□□□□ -0.62
KDM4C-211ENST00000494570 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
KDM4C-211ENST00000494570 MTHFSP49914 203 aa11.2□□□□□ -0.62
KDM4C-211ENST00000494570 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
KDM4C-211ENST00000494570 ACSBG1Q96GR2 724 aa11.2□□□□□ -0.62
KDM4C-211ENST00000494570 TNS1Q9HBL0 1735 aaKnown RBP11.2□□□□□ -0.62
KDM4C-211ENST00000494570 PLSCR1O15162 318 aa11.19□□□□□ -0.62
KDM4C-211ENST00000494570 CYP27B1O15528 508 aa11.19□□□□□ -0.62
KDM4C-211ENST00000494570 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
KDM4C-211ENST00000494570 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
KDM4C-211ENST00000494570 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
KDM4C-211ENST00000494570 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
KDM4C-211ENST00000494570 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
KDM4C-211ENST00000494570 PARD3Q8TEW0 1356 aa11.17□□□□□ -0.62
KDM4C-211ENST00000494570 RGPD1P0DJD0 1748 aa11.17□□□□□ -0.62
KDM4C-211ENST00000494570 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
KDM4C-211ENST00000494570 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
KDM4C-211ENST00000494570 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
KDM4C-211ENST00000494570 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
KDM4C-211ENST00000494570 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
KDM4C-211ENST00000494570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■■□ 21.2
KDM4C-211ENST00000494570 MAP2P11137 1827 aaKnown RBP11.16□□□□□ -0.62
KDM4C-211ENST00000494570 KDRP35968 1356 aa11.15□□□□□ -0.63
KDM4C-211ENST00000494570 COL3A1P02461 1466 aaPredicted RBP11.14□□□□□ -0.63
KDM4C-211ENST00000494570 TXNRD1Q16881 649 aa11.14□□□□□ -0.63
KDM4C-211ENST00000494570 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
KDM4C-211ENST00000494570 SHANK3Q9BYB0 1731 aa11.14□□□□□ -0.63
KDM4C-211ENST00000494570 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
KDM4C-211ENST00000494570 PHKG2P15735 406 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 R3HDM1Q15032 1099 aaKnown RBP11.13□□□□□ -0.63
KDM4C-211ENST00000494570 SULT6B1Q6IMI4 303 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 LRRC4BQ9NT99 713 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 SBF2Q86WG5 1849 aa11.13□□□□□ -0.63
KDM4C-211ENST00000494570 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
KDM4C-211ENST00000494570 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
KDM4C-211ENST00000494570 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
KDM4C-211ENST00000494570 NHSQ6T4R5 1651 aa11.11□□□□□ -0.63
KDM4C-211ENST00000494570 DIAPH1O60610 1272 aaKnown RBP11.11□□□□□ -0.63
KDM4C-211ENST00000494570 PLCG2P16885 1265 aa11.11□□□□□ -0.63
KDM4C-211ENST00000494570 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
KDM4C-211ENST00000494570 DDX10Q13206 875 aaKnown RBP11.11□□□□□ -0.63
KDM4C-211ENST00000494570 HMOX1P09601 288 aa11.1□□□□□ -0.63
KDM4C-211ENST00000494570 IRX5P78411 483 aaPredicted RBP11.1□□□□□ -0.63
KDM4C-211ENST00000494570 IFNL2Q8IZJ0 200 aa11.1□□□□□ -0.63
KDM4C-211ENST00000494570 PIGBQ92521 554 aa11.1□□□□□ -0.63
KDM4C-211ENST00000494570 SYTL4Q96C24 671 aaPredicted RBP11.1□□□□□ -0.63
KDM4C-211ENST00000494570 RREB1Q92766 1687 aa11.1□□□□□ -0.63
KDM4C-211ENST00000494570 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
KDM4C-211ENST00000494570 KCNQ4P56696 695 aa11.09□□□□□ -0.63
KDM4C-211ENST00000494570 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
KDM4C-211ENST00000494570 PDGFDQ9GZP0 370 aaPredicted RBP11.09□□□□□ -0.63
KDM4C-211ENST00000494570 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
KDM4C-211ENST00000494570 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
KDM4C-211ENST00000494570 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
KDM4C-211ENST00000494570 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
KDM4C-211ENST00000494570 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
KDM4C-211ENST00000494570 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
KDM4C-211ENST00000494570 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
KDM4C-211ENST00000494570 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
KDM4C-211ENST00000494570 RGPD3A6NKT7 1758 aaPredicted RBP11.07□□□□□ -0.64
KDM4C-211ENST00000494570 RGPD4Q7Z3J3 1758 aa11.07□□□□□ -0.64
KDM4C-211ENST00000494570 SLC15A2Q16348 729 aa11.06□□□□□ -0.64
KDM4C-211ENST00000494570 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
KDM4C-211ENST00000494570 DCAF5Q96JK2 942 aa11.06□□□□□ -0.64
KDM4C-211ENST00000494570 ASAP1Q9ULH1 1129 aa11.06□□□□□ -0.64
KDM4C-211ENST00000494570 TOGARAM1Q9Y4F4 1720 aa11.06□□□□□ -0.64
KDM4C-211ENST00000494570 BTAF1O14981 1849 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 ERVV-2B6SEH9 535 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 DOT1LQ8TEK3 1739 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 PHACTR3Q96KR7 559 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 OCEL1Q9H607 264 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 LGR6Q9HBX8 967 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 PAPPAQ13219 1627 aa11.05□□□□□ -0.64
KDM4C-211ENST00000494570 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
KDM4C-211ENST00000494570 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
KDM4C-211ENST00000494570 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
KDM4C-211ENST00000494570 PSEN1P49768 467 aa11.04□□□□□ -0.64
KDM4C-211ENST00000494570 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
KDM4C-211ENST00000494570 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
KDM4C-211ENST00000494570 RALBP1Q15311 655 aa11.03□□□□□ -0.64
KDM4C-211ENST00000494570 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
KDM4C-211ENST00000494570 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
KDM4C-211ENST00000494570 STK32BQ9NY57 414 aa11.03□□□□□ -0.64
KDM4C-211ENST00000494570 TMOD3Q9NYL9 352 aa11.03□□□□□ -0.64
KDM4C-211ENST00000494570 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
KDM4C-211ENST00000494570 RNMTO43148 476 aaKnown RBP11.02□□□□□ -0.65
KDM4C-211ENST00000494570 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
KDM4C-211ENST00000494570 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms