RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
FN1-225ENST00000494446 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
FN1-225ENST00000494446 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
FN1-225ENST00000494446 TIAM2Q8IVF5 1701 aa9.79□□□□□ -0.84
FN1-225ENST00000494446 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
FN1-225ENST00000494446 KCNA3P22001 575 aa9.78□□□□□ -0.84
FN1-225ENST00000494446 USHBP1Q8N6Y0 703 aa9.78□□□□□ -0.84
FN1-225ENST00000494446 RAPGEF4Q8WZA2 1011 aa9.78□□□□□ -0.84
FN1-225ENST00000494446 PIM2Q9P1W9 311 aa9.78□□□□□ -0.84
FN1-225ENST00000494446 VIRMAQ69YN4 1812 aaKnown RBP9.77□□□□□ -0.84
FN1-225ENST00000494446 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
FN1-225ENST00000494446 AMPHP49418 695 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 CTCFP49711 727 aaPredicted RBP9.77□□□□□ -0.85
FN1-225ENST00000494446 TMF1P82094 1093 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 MLLT1Q03111 559 aaPredicted RBP9.77□□□□□ -0.85
FN1-225ENST00000494446 DALRD3Q5D0E6 543 aaKnown RBP9.77□□□□□ -0.85
FN1-225ENST00000494446 NLGN1Q8N2Q7 840 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 ABHD8Q96I13 439 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 DCAF5Q96JK2 942 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 PDE4DIPQ5VU43 2346 aa9.77□□□□□ -0.85
FN1-225ENST00000494446 LOC102724428A0A0B4J2F2 783 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 TATP17735 454 aaPredicted RBP9.76□□□□□ -0.85
FN1-225ENST00000494446 HOXC9P31274 260 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 SIK1P57059 783 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
FN1-225ENST00000494446 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 TNRC18O15417 2968 aaPredicted RBP9.75□□□□□ -0.85
FN1-225ENST00000494446 FBLN1P23142 703 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 ATP6V1AP38606 617 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 LBX1P52954 281 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 ITPK1Q13572 414 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 NBPF6Q5VWK0 638 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 HDGFL2Q7Z4V5 671 aaPredicted RBP9.75□□□□□ -0.85
FN1-225ENST00000494446 PIGBQ92521 554 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 NBPF4Q96M43 638 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 MAP3K19Q56UN5 1328 aa9.75□□□□□ -0.85
FN1-225ENST00000494446 DICER1Q9UPY3 1922 aaKnown RBP9.74□□□□□ -0.85
FN1-225ENST00000494446 GLTPD2A6NH11 291 aa9.74□□□□□ -0.85
FN1-225ENST00000494446 CCDC85CA6NKD9 419 aa9.74□□□□□ -0.85
FN1-225ENST00000494446 RASSF7Q02833 373 aa9.74□□□□□ -0.85
FN1-225ENST00000494446 CREBZFQ9NS37 354 aa9.74□□□□□ -0.85
FN1-225ENST00000494446 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
FN1-225ENST00000494446 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
FN1-225ENST00000494446 CYP27B1O15528 508 aa9.73□□□□□ -0.85
FN1-225ENST00000494446 NPM3O75607 178 aaKnown RBP9.73□□□□□ -0.85
FN1-225ENST00000494446 CHRNA5P30532 468 aa9.73□□□□□ -0.85
FN1-225ENST00000494446 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
FN1-225ENST00000494446 GYS1P13807 737 aa9.72□□□□□ -0.85
FN1-225ENST00000494446 RFC4P35249 363 aa9.72□□□□□ -0.85
FN1-225ENST00000494446 ARHGEF1Q92888 912 aaKnown RBP9.72□□□□□ -0.85
FN1-225ENST00000494446 SLC12A5Q9H2X9 1139 aa9.72□□□□□ -0.85
FN1-225ENST00000494446 ASAP1Q9ULH1 1129 aa9.72□□□□□ -0.85
FN1-225ENST00000494446 COL5A3P25940 1745 aaPredicted RBP9.72□□□□□ -0.85
FN1-225ENST00000494446 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
FN1-225ENST00000494446 CNTNAP1P78357 1384 aa9.72□□□□□ -0.85
FN1-225ENST00000494446 AFDNP55196 1824 aaKnown RBP9.71□□□□□ -0.85
FN1-225ENST00000494446 LMNB1P20700 586 aa9.71□□□□□ -0.86
FN1-225ENST00000494446 COG3Q96JB2 828 aa9.71□□□□□ -0.86
FN1-225ENST00000494446 SMG6Q86US8 1419 aaKnown RBP9.71□□□□□ -0.86
FN1-225ENST00000494446 DLEC1Q9Y238 1755 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 POTECB2RU33 542 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 VEGFBP49765 207 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 RGS19P49795 217 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 CHADLQ6NUI6 762 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 TERF2IPQ9NYB0 399 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 TMOD3Q9NYL9 352 aa9.7□□□□□ -0.86
FN1-225ENST00000494446 KDM6AO15550 1401 aaPredicted RBP9.7□□□□□ -0.86
FN1-225ENST00000494446 A0A1W2PP64 1363 aa9.69□□□□□ -0.86
FN1-225ENST00000494446 HSPA8P11142 646 aaKnown RBP9.69□□□□□ -0.86
FN1-225ENST00000494446 RRS1Q15050 365 aaKnown RBP9.69□□□□□ -0.86
FN1-225ENST00000494446 DPY19L2Q6NUT2 758 aa9.69□□□□□ -0.86
FN1-225ENST00000494446 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
FN1-225ENST00000494446 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
FN1-225ENST00000494446 ZNF831Q5JPB2 1677 aa9.68□□□□□ -0.86
FN1-225ENST00000494446 CACNA1SQ13698 1873 aa9.68□□□□□ -0.86
FN1-225ENST00000494446 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 ROCK2O75116 1388 aaKnown RBP9.67□□□□□ -0.86
FN1-225ENST00000494446 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 RPS6KA4O75676 772 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 POTEIP0CG38 1075 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 DDR1Q08345 913 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
FN1-225ENST00000494446 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
FN1-225ENST00000494446 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
FN1-225ENST00000494446 FKBP8Q14318 412 aa9.66□□□□□ -0.86
FN1-225ENST00000494446 NKX1-1Q15270 411 aaPredicted RBP9.66□□□□□ -0.86
FN1-225ENST00000494446 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
FN1-225ENST00000494446 SRP68Q9UHB9 627 aaKnown RBP9.66□□□□□ -0.86
FN1-225ENST00000494446 SPG7Q9UQ90 795 aa9.66□□□□□ -0.86
FN1-225ENST00000494446 SCN4AP35499 1836 aa9.66□□□□□ -0.86
FN1-225ENST00000494446 TMEM88BA6NKF7 163 aa9.65□□□□□ -0.86
FN1-225ENST00000494446 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
FN1-225ENST00000494446 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 1286.4 ms