RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
SAPCD1-211ENST00000494299 HMOX1P09601 288 aa17.91■□□□□ 0.46
SAPCD1-211ENST00000494299 ITPK1Q13572 414 aa17.91■□□□□ 0.46
SAPCD1-211ENST00000494299 AMIGO3Q86WK7 504 aa17.91■□□□□ 0.46
SAPCD1-211ENST00000494299 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
SAPCD1-211ENST00000494299 ATF5Q9Y2D1 282 aaPredicted RBP17.91■□□□□ 0.46
SAPCD1-211ENST00000494299 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
SAPCD1-211ENST00000494299 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
SAPCD1-211ENST00000494299 C1orf141Q5JVX7 400 aa17.9■□□□□ 0.46
SAPCD1-211ENST00000494299 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
SAPCD1-211ENST00000494299 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
SAPCD1-211ENST00000494299 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
SAPCD1-211ENST00000494299 FLAD1Q8NFF5 587 aa17.88■□□□□ 0.45
SAPCD1-211ENST00000494299 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
SAPCD1-211ENST00000494299 TJP1Q07157 1748 aa17.88■□□□□ 0.45
SAPCD1-211ENST00000494299 UBR2Q8IWV8 1755 aa17.88■□□□□ 0.45
SAPCD1-211ENST00000494299 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
SAPCD1-211ENST00000494299 CABP4P57796 275 aa17.87■□□□□ 0.45
SAPCD1-211ENST00000494299 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
SAPCD1-211ENST00000494299 SSFA2P28290 1259 aa17.86■□□□□ 0.45
SAPCD1-211ENST00000494299 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
SAPCD1-211ENST00000494299 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
SAPCD1-211ENST00000494299 ATP6V1AP38606 617 aa17.85■□□□□ 0.45
SAPCD1-211ENST00000494299 KCPQ6ZWJ8 1503 aa17.85■□□□□ 0.45
SAPCD1-211ENST00000494299 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
SAPCD1-211ENST00000494299 CFAP53Q96M91 514 aa17.85■□□□□ 0.45
SAPCD1-211ENST00000494299 ARXQ96QS3 562 aa17.85■□□□□ 0.45
SAPCD1-211ENST00000494299 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
SAPCD1-211ENST00000494299 CNTNAP4Q9C0A0 1308 aa17.84■□□□□ 0.45
SAPCD1-211ENST00000494299 SYT17Q9BSW7 474 aa17.84■□□□□ 0.45
SAPCD1-211ENST00000494299 FCHSD2O94868 740 aa17.83■□□□□ 0.44
SAPCD1-211ENST00000494299 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
SAPCD1-211ENST00000494299 FHDC1Q9C0D6 1143 aaPredicted RBP17.83■□□□□ 0.44
SAPCD1-211ENST00000494299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.82■□□□□ 0.44
SAPCD1-211ENST00000494299 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
SAPCD1-211ENST00000494299 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
SAPCD1-211ENST00000494299 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
SAPCD1-211ENST00000494299 AK7Q96M32 723 aa17.82■□□□□ 0.44
SAPCD1-211ENST00000494299 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
SAPCD1-211ENST00000494299 NUDCQ9Y266 331 aa17.81■□□□□ 0.44
SAPCD1-211ENST00000494299 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
SAPCD1-211ENST00000494299 GNAT3A8MTJ3 354 aa17.8■□□□□ 0.44
SAPCD1-211ENST00000494299 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
SAPCD1-211ENST00000494299 ADRA2BP18089 450 aa17.79■□□□□ 0.44
SAPCD1-211ENST00000494299 RALBP1Q15311 655 aa17.79■□□□□ 0.44
SAPCD1-211ENST00000494299 RPS6KA4O75676 772 aa17.78■□□□□ 0.44
SAPCD1-211ENST00000494299 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
SAPCD1-211ENST00000494299 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
SAPCD1-211ENST00000494299 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
SAPCD1-211ENST00000494299 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
SAPCD1-211ENST00000494299 GNPATO15228 680 aa17.77■□□□□ 0.44
SAPCD1-211ENST00000494299 PTCD1O75127 700 aaKnown RBP17.77■□□□□ 0.44
SAPCD1-211ENST00000494299 POLD1P28340 1107 aa17.77■□□□□ 0.44
SAPCD1-211ENST00000494299 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
SAPCD1-211ENST00000494299 KIF13BQ9NQT8 1826 aa17.77■□□□□ 0.43
SAPCD1-211ENST00000494299 U2AF1L5P0DN76 240 aaPredicted RBP17.76■□□□□ 0.43
SAPCD1-211ENST00000494299 U2AF1Q01081 240 aaKnown RBP eCLIP17.76■□□□□ 0.43
SAPCD1-211ENST00000494299 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
SAPCD1-211ENST00000494299 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
SAPCD1-211ENST00000494299 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
SAPCD1-211ENST00000494299 RTCBQ9Y3I0 505 aaKnown RBP17.75■□□□□ 0.43
SAPCD1-211ENST00000494299 HTATSF1O43719 755 aaKnown RBP17.74■□□□□ 0.43
SAPCD1-211ENST00000494299 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
SAPCD1-211ENST00000494299 SLC39A6Q13433 755 aa17.74■□□□□ 0.43
SAPCD1-211ENST00000494299 ARHGEF1Q92888 912 aaKnown RBP17.74■□□□□ 0.43
SAPCD1-211ENST00000494299 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
SAPCD1-211ENST00000494299 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
SAPCD1-211ENST00000494299 PHF14O94880 888 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 TRAPPC3LQ5T215 181 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 DNAJC10Q8IXB1 793 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 CD2APQ9Y5K6 639 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 CHD4Q14839 1912 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 KIAA1551Q9HCM1 1747 aa17.72■□□□□ 0.43
SAPCD1-211ENST00000494299 MSH5O43196 834 aa17.71■□□□□ 0.43
SAPCD1-211ENST00000494299 GYS1P13807 737 aa17.71■□□□□ 0.43
SAPCD1-211ENST00000494299 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
SAPCD1-211ENST00000494299 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.42
SAPCD1-211ENST00000494299 NLGN2Q8NFZ4 835 aa17.7■□□□□ 0.42
SAPCD1-211ENST00000494299 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
SAPCD1-211ENST00000494299 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
SAPCD1-211ENST00000494299 TEFQ10587 303 aa17.69■□□□□ 0.42
SAPCD1-211ENST00000494299 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SAPCD1-211ENST00000494299 CCDC87Q9NVE4 849 aa17.69■□□□□ 0.42
SAPCD1-211ENST00000494299 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
SAPCD1-211ENST00000494299 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
SAPCD1-211ENST00000494299 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
SAPCD1-211ENST00000494299 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
SAPCD1-211ENST00000494299 NRXN2Q9P2S2 1712 aa17.66■□□□□ 0.42
SAPCD1-211ENST00000494299 C10orf71Q711Q0 1435 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 KCNQ3O43525 872 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 MMP10P09238 476 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 RFC4P35249 363 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 EIF5P55010 431 aaKnown RBP17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 MCM10Q7L590 875 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 ZBTB1Q9Y2K1 713 aa17.65■□□□□ 0.42
SAPCD1-211ENST00000494299 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
SAPCD1-211ENST00000494299 TM4SF1P30408 202 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms