RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 A0A1W2PRG0 241 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 NEMFO60524 1076 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 CETN1Q12798 172 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 DRC1Q96MC2 740 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
BRCA1-221ENST00000493795 TNNT1P13805 278 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 ACTN2P35609 894 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 APBB1IPQ7Z5R6 666 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-221ENST00000493795 ZNF287Q9HBT7 754 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 PIBF1Q8WXW3 757 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 RAB34Q9BZG1 259 aa9.11□□□□□ -0.95
BRCA1-221ENST00000493795 TPD52P55327 224 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 CAMK4Q16566 473 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 CLIP2Q9UDT6 1046 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 CKAP4Q07065 602 aaKnown RBP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 GOLGA6L9A6NEM1 432 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 KIF4AO95239 1232 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 TMEM266Q2M3C6 531 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 IQCGQ9H095 443 aaKnown RBP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 PPP1R1BQ9UD71 204 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 DYNC1I1O14576 645 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 KLHL10Q6JEL2 608 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 SMC6Q96SB8 1091 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 SIL1Q9H173 461 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 TMOD2Q9NZR1 351 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 SYCE3A1L190 88 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 RPUSD2Q8IZ73 545 aaKnown RBP9.1□□□□□ -0.95
BRCA1-221ENST00000493795 EHMT1Q9H9B1 1298 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 CEP83Q9Y592 693 aa9.1□□□□□ -0.95
BRCA1-221ENST00000493795 TWISTNBQ3B726 338 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-221ENST00000493795 SLU7O95391 586 aaKnown RBP9.09□□□□□ -0.95
BRCA1-221ENST00000493795 PRPF4BQ13523 1007 aaKnown RBP9.09□□□□□ -0.95
BRCA1-221ENST00000493795 CCDC183Q5T5S1 534 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 AACSQ86V21 672 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 KIF3CO14782 793 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 GSDMDP57764 484 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 IFI16Q16666 785 aaKnown RBP9.09□□□□□ -0.95
BRCA1-221ENST00000493795 NDC80O14777 642 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 ATP2C2O75185 946 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 CCDC96Q2M329 555 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 MAP7D1Q3KQU3 841 aa9.09□□□□□ -0.95
BRCA1-221ENST00000493795 CUL5Q93034 780 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 CTAGE5O15320 804 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 WDHD1O75717 1129 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 IVLP07476 585 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 ARL1P40616 181 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 PSMC4P43686 418 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 EHBP1Q8NDI1 1231 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 PNISRQ8TF01 805 aaKnown RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 STMN4Q9H169 189 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 MCM4P33991 863 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 KIAA0753Q2KHM9 967 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 AEBP2Q6ZN18 517 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 TMX1Q9H3N1 280 aa9.08□□□□□ -0.96
BRCA1-221ENST00000493795 NOB1Q9ULX3 412 aaKnown RBP9.08□□□□□ -0.96
BRCA1-221ENST00000493795 DHX57Q6P158 1386 aaKnown RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 LRP2BPQ9P2M1 347 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 MTIF2P46199 727 aaKnown RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 CHMP4BP1P59074 171 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 TTC14Q96N46 770 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 GTPBP4Q9BZE4 634 aaKnown RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 STXBP4Q6ZWJ1 553 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 ANKS4BQ8N8V4 417 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 SCAND2PQ9GZW5 306 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 CNTLNQ9NXG0 1405 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 NOP2P46087 812 aaKnown RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 CWC27Q6UX04 472 aaKnown RBP9.07□□□□□ -0.96
BRCA1-221ENST00000493795 CPLX3Q8WVH0 158 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 PLVAPQ9BX97 442 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 GPRASP1Q5JY77 1395 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 TTC21AQ8NDW8 1320 aa9.07□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC196A0A1B0GTZ2 297 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 TATP17735 454 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-221ENST00000493795 GGNBP2Q9H3C7 697 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 RASAL2Q9UJF2 1139 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 PRC1O43663 620 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CASTP20810 708 aaKnown RBP9.06□□□□□ -0.96
BRCA1-221ENST00000493795 EXOSC9Q06265 439 aaKnown RBP9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC40Q4G0X9 1142 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 BAG4O95429 457 aaKnown RBP9.06□□□□□ -0.96
BRCA1-221ENST00000493795 NLRP6P59044 892 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CFAP58Q5T655 872 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 PAIP2Q9BPZ3 127 aaKnown RBP9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC77Q9BR77 488 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC172P0C7W6 258 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms