RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 CHD4Q14839 1912 aa12.49□□□□□ -0.41
NFIA-213ENST00000493627 KDRP35968 1356 aa12.48□□□□□ -0.41
NFIA-213ENST00000493627 SSFA2P28290 1259 aa12.48□□□□□ -0.41
NFIA-213ENST00000493627 ITPK1Q13572 414 aa12.48□□□□□ -0.41
NFIA-213ENST00000493627 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
NFIA-213ENST00000493627 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
NFIA-213ENST00000493627 ZBTB22O15209 634 aa12.47□□□□□ -0.41
NFIA-213ENST00000493627 HSP90AB1P08238 724 aaKnown RBP12.47□□□□□ -0.41
NFIA-213ENST00000493627 SMIM5Q71RC9 77 aa12.47□□□□□ -0.41
NFIA-213ENST00000493627 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
NFIA-213ENST00000493627 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
NFIA-213ENST00000493627 GNPATO15228 680 aa12.46□□□□□ -0.41
NFIA-213ENST00000493627 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
NFIA-213ENST00000493627 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
NFIA-213ENST00000493627 PLEKHO1Q53GL0 409 aaPredicted RBP12.46□□□□□ -0.41
NFIA-213ENST00000493627 ZNF530Q6P9A1 599 aaPredicted RBP12.46□□□□□ -0.41
NFIA-213ENST00000493627 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
NFIA-213ENST00000493627 DCAF5Q96JK2 942 aa12.46□□□□□ -0.41
NFIA-213ENST00000493627 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.41
NFIA-213ENST00000493627 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
NFIA-213ENST00000493627 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
NFIA-213ENST00000493627 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
NFIA-213ENST00000493627 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
NFIA-213ENST00000493627 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
NFIA-213ENST00000493627 ZNF831Q5JPB2 1677 aa12.44□□□□□ -0.42
NFIA-213ENST00000493627 CABP4P57796 275 aa12.43□□□□□ -0.42
NFIA-213ENST00000493627 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
NFIA-213ENST00000493627 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
NFIA-213ENST00000493627 SLC4A9Q96Q91 983 aa12.43□□□□□ -0.42
NFIA-213ENST00000493627 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
NFIA-213ENST00000493627 IL13P35225 146 aa12.42□□□□□ -0.42
NFIA-213ENST00000493627 MTHFSP49914 203 aa12.42□□□□□ -0.42
NFIA-213ENST00000493627 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
NFIA-213ENST00000493627 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
NFIA-213ENST00000493627 RTCBQ9Y3I0 505 aaKnown RBP12.41□□□□□ -0.42
NFIA-213ENST00000493627 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
NFIA-213ENST00000493627 MMP10P09238 476 aa12.39□□□□□ -0.43
NFIA-213ENST00000493627 C1QTNF8P60827 252 aa12.39□□□□□ -0.43
NFIA-213ENST00000493627 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
NFIA-213ENST00000493627 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
NFIA-213ENST00000493627 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 TJP1Q07157 1748 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 PTCD1O75127 700 aaKnown RBP12.38□□□□□ -0.43
NFIA-213ENST00000493627 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
NFIA-213ENST00000493627 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 MRC1P22897 1456 aa12.38□□□□□ -0.43
NFIA-213ENST00000493627 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
NFIA-213ENST00000493627 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
NFIA-213ENST00000493627 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
NFIA-213ENST00000493627 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
NFIA-213ENST00000493627 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
NFIA-213ENST00000493627 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
NFIA-213ENST00000493627 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
NFIA-213ENST00000493627 ADCY9O60503 1353 aa12.36□□□□□ -0.43
NFIA-213ENST00000493627 HMOX1P09601 288 aa12.36□□□□□ -0.43
NFIA-213ENST00000493627 RFC4P35249 363 aa12.36□□□□□ -0.43
NFIA-213ENST00000493627 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
NFIA-213ENST00000493627 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
NFIA-213ENST00000493627 COL3A1P02461 1466 aaPredicted RBP12.35□□□□□ -0.43
NFIA-213ENST00000493627 KIF13BQ9NQT8 1826 aa12.35□□□□□ -0.43
NFIA-213ENST00000493627 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
NFIA-213ENST00000493627 KIAA1551Q9HCM1 1747 aa12.35□□□□□ -0.43
NFIA-213ENST00000493627 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
NFIA-213ENST00000493627 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
NFIA-213ENST00000493627 GYS1P13807 737 aa12.35□□□□□ -0.43
NFIA-213ENST00000493627 CRKLP46109 303 aaKnown RBP12.35□□□□□ -0.43
NFIA-213ENST00000493627 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
NFIA-213ENST00000493627 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
NFIA-213ENST00000493627 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
NFIA-213ENST00000493627 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
NFIA-213ENST00000493627 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
NFIA-213ENST00000493627 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
NFIA-213ENST00000493627 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
NFIA-213ENST00000493627 RNMTO43148 476 aaKnown RBP12.32□□□□□ -0.44
NFIA-213ENST00000493627 TGFB2P61812 414 aa12.32□□□□□ -0.44
NFIA-213ENST00000493627 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
NFIA-213ENST00000493627 DNAJC10Q8IXB1 793 aa12.32□□□□□ -0.44
NFIA-213ENST00000493627 SRP68Q9UHB9 627 aaKnown RBP12.32□□□□□ -0.44
NFIA-213ENST00000493627 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
NFIA-213ENST00000493627 SLC39A6Q13433 755 aa12.31□□□□□ -0.44
NFIA-213ENST00000493627 CNGB1Q14028 1251 aaPredicted RBP12.31□□□□□ -0.44
NFIA-213ENST00000493627 FKBP8Q14318 412 aa12.31□□□□□ -0.44
NFIA-213ENST00000493627 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
NFIA-213ENST00000493627 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
NFIA-213ENST00000493627 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
NFIA-213ENST00000493627 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
NFIA-213ENST00000493627 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
NFIA-213ENST00000493627 DPEP1P16444 411 aa12.3□□□□□ -0.44
NFIA-213ENST00000493627 DDR1Q08345 913 aa12.3□□□□□ -0.44
NFIA-213ENST00000493627 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
NFIA-213ENST00000493627 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
NFIA-213ENST00000493627 U2SURPO15042 1029 aaKnown RBP12.29□□□□□ -0.44
NFIA-213ENST00000493627 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
NFIA-213ENST00000493627 COL15A1P39059 1388 aa12.29□□□□□ -0.44
NFIA-213ENST00000493627 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
NFIA-213ENST00000493627 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
NFIA-213ENST00000493627 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms