RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PHKG2P15735 406 aa24.52■■□□□ 1.52
NUP50-218ENST00000493456 PXDNLA1KZ92 1463 aa24.51■■□□□ 1.51
NUP50-218ENST00000493456 KIF3CO14782 793 aa24.51■■□□□ 1.51
NUP50-218ENST00000493456 MMP10P09238 476 aa24.51■■□□□ 1.51
NUP50-218ENST00000493456 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
NUP50-218ENST00000493456 TGFB2P61812 414 aa24.49■■□□□ 1.51
NUP50-218ENST00000493456 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
NUP50-218ENST00000493456 KDRP35968 1356 aa24.49■■□□□ 1.51
NUP50-218ENST00000493456 KIAA1551Q9HCM1 1747 aa24.48■■□□□ 1.51
NUP50-218ENST00000493456 RTCBQ9Y3I0 505 aaKnown RBP24.48■■□□□ 1.51
NUP50-218ENST00000493456 C10orf71Q711Q0 1435 aa24.47■■□□□ 1.51
NUP50-218ENST00000493456 ADRA2BP18089 450 aa24.46■■□□□ 1.51
NUP50-218ENST00000493456 TRAPPC3LQ5T215 181 aa24.46■■□□□ 1.51
NUP50-218ENST00000493456 NLGN1Q8N2Q7 840 aa24.46■■□□□ 1.51
NUP50-218ENST00000493456 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
NUP50-218ENST00000493456 ERVV-2B6SEH9 535 aa24.43■■□□□ 1.5
NUP50-218ENST00000493456 HSP90AB1P08238 724 aaKnown RBP24.43■■□□□ 1.5
NUP50-218ENST00000493456 APLP1P51693 650 aa24.43■■□□□ 1.5
NUP50-218ENST00000493456 EIF4A2Q14240 407 aaKnown RBP24.43■■□□□ 1.5
NUP50-218ENST00000493456 RC3H1Q5TC82 1133 aaKnown RBP24.43■■□□□ 1.5
NUP50-218ENST00000493456 BCS1LQ9Y276 419 aa24.43■■□□□ 1.5
NUP50-218ENST00000493456 N4BP2Q86UW6 1770 aaPredicted RBP24.43■■□□□ 1.5
NUP50-218ENST00000493456 CNTNAP4Q9C0A0 1308 aa24.42■■□□□ 1.5
NUP50-218ENST00000493456 C4AP0C0L4 1744 aa24.42■■□□□ 1.5
NUP50-218ENST00000493456 COL5A3P25940 1745 aaPredicted RBP24.42■■□□□ 1.5
NUP50-218ENST00000493456 CCDC87Q9NVE4 849 aa24.42■■□□□ 1.5
NUP50-218ENST00000493456 TOMM70O94826 608 aa24.41■■□□□ 1.5
NUP50-218ENST00000493456 DCAF5Q96JK2 942 aa24.41■■□□□ 1.5
NUP50-218ENST00000493456 SLC4A9Q96Q91 983 aa24.4■■□□□ 1.5
NUP50-218ENST00000493456 A0A0G2JLW4 131 aa24.39■■□□□ 1.49
NUP50-218ENST00000493456 ARHGEF1Q92888 912 aaKnown RBP24.39■■□□□ 1.49
NUP50-218ENST00000493456 RBM42Q9BTD8 480 aaKnown RBP24.39■■□□□ 1.49
NUP50-218ENST00000493456 GYS1P13807 737 aa24.38■■□□□ 1.49
NUP50-218ENST00000493456 RFC4P35249 363 aa24.38■■□□□ 1.49
NUP50-218ENST00000493456 PARP3Q9Y6F1 533 aa24.38■■□□□ 1.49
NUP50-218ENST00000493456 BRCA1P38398 1863 aaKnown RBP24.37■■□□□ 1.49
NUP50-218ENST00000493456 RPS6KA4O75676 772 aa24.37■■□□□ 1.49
NUP50-218ENST00000493456 ARHGAP27Q6ZUM4 889 aa24.37■■□□□ 1.49
NUP50-218ENST00000493456 DPEP1P16444 411 aa24.36■■□□□ 1.49
NUP50-218ENST00000493456 FCHSD2O94868 740 aa24.35■■□□□ 1.49
NUP50-218ENST00000493456 PLEKHO1Q53GL0 409 aaPredicted RBP24.35■■□□□ 1.49
NUP50-218ENST00000493456 KDM6AO15550 1401 aaPredicted RBP24.35■■□□□ 1.49
NUP50-218ENST00000493456 TNNT2P45379 298 aaPredicted RBP24.34■■□□□ 1.49
NUP50-218ENST00000493456 AMOTQ4VCS5 1084 aa24.34■■□□□ 1.49
NUP50-218ENST00000493456 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.49
NUP50-218ENST00000493456 CABP4P57796 275 aa24.33■■□□□ 1.49
NUP50-218ENST00000493456 ZNF530Q6P9A1 599 aaPredicted RBP24.32■■□□□ 1.48
NUP50-218ENST00000493456 NMRK2Q9NPI5 230 aa24.32■■□□□ 1.48
NUP50-218ENST00000493456 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
NUP50-218ENST00000493456 DNAJC5GQ8N7S2 189 aa24.31■■□□□ 1.48
NUP50-218ENST00000493456 KCNA3P22001 575 aa24.3■■□□□ 1.48
NUP50-218ENST00000493456 RBM46Q8TBY0 533 aaKnown RBP24.3■■□□□ 1.48
NUP50-218ENST00000493456 PIM2Q9P1W9 311 aa24.3■■□□□ 1.48
NUP50-218ENST00000493456 MYH14Q7Z406 1995 aaKnown RBP24.3■■□□□ 1.48
NUP50-218ENST00000493456 C9orf131Q5VYM1 1079 aa24.29■■□□□ 1.48
NUP50-218ENST00000493456 WDR90Q96KV7 1748 aa24.28■■□□□ 1.48
NUP50-218ENST00000493456 CRKLP46109 303 aaKnown RBP24.28■■□□□ 1.48
NUP50-218ENST00000493456 MTHFSP49914 203 aa24.28■■□□□ 1.48
NUP50-218ENST00000493456 C1orf141Q5JVX7 400 aa24.28■■□□□ 1.48
NUP50-218ENST00000493456 C16orf71Q8IYS4 520 aaPredicted RBP24.28■■□□□ 1.48
NUP50-218ENST00000493456 DALRD3Q5D0E6 543 aaKnown RBP24.27■■□□□ 1.48
NUP50-218ENST00000493456 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
NUP50-218ENST00000493456 PCNTO95613 3336 aa24.27■■□□□ 1.48
NUP50-218ENST00000493456 USP42Q9H9J4 1324 aaKnown RBP24.27■■□□□ 1.48
NUP50-218ENST00000493456 PTCD1O75127 700 aaKnown RBP24.26■■□□□ 1.47
NUP50-218ENST00000493456 KDM2BQ8NHM5 1336 aa24.26■■□□□ 1.47
NUP50-218ENST00000493456 TJP1Q07157 1748 aa24.25■■□□□ 1.47
NUP50-218ENST00000493456 FSTL1Q12841 308 aa24.24■■□□□ 1.47
NUP50-218ENST00000493456 FKBP8Q14318 412 aa24.24■■□□□ 1.47
NUP50-218ENST00000493456 DDR1Q08345 913 aa24.23■■□□□ 1.47
NUP50-218ENST00000493456 NFATC2IPQ8NCF5 419 aa24.23■■□□□ 1.47
NUP50-218ENST00000493456 SRP68Q9UHB9 627 aaKnown RBP24.23■■□□□ 1.47
NUP50-218ENST00000493456 KCPQ6ZWJ8 1503 aa24.23■■□□□ 1.47
NUP50-218ENST00000493456 RNF181Q9P0P0 153 aa24.22■■□□□ 1.47
NUP50-218ENST00000493456 TNRC6CQ9HCJ0 1690 aaKnown RBP24.21■■□□□ 1.47
NUP50-218ENST00000493456 AEBP1Q8IUX7 1158 aa24.21■■□□□ 1.47
NUP50-218ENST00000493456 KLRG1Q96E93 195 aa24.2■■□□□ 1.46
NUP50-218ENST00000493456 PANK3Q9H999 370 aa24.2■■□□□ 1.46
NUP50-218ENST00000493456 ADAMTS7Q9UKP4 1686 aa24.2■■□□□ 1.46
NUP50-218ENST00000493456 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
NUP50-218ENST00000493456 POLRMTO00411 1230 aaKnown RBP24.19■■□□□ 1.46
NUP50-218ENST00000493456 ZC3H4Q9UPT8 1303 aaKnown RBP24.18■■□□□ 1.46
NUP50-218ENST00000493456 SULT6B1Q6IMI4 303 aa24.18■■□□□ 1.46
NUP50-218ENST00000493456 INTS5Q6P9B9 1019 aaKnown RBP24.18■■□□□ 1.46
NUP50-218ENST00000493456 ZPR1O75312 459 aa24.17■■□□□ 1.46
NUP50-218ENST00000493456 TM4SF1P30408 202 aa24.17■■□□□ 1.46
NUP50-218ENST00000493456 CHRNA5P30532 468 aa24.17■■□□□ 1.46
NUP50-218ENST00000493456 TRIM26Q12899 539 aaPredicted RBP24.17■■□□□ 1.46
NUP50-218ENST00000493456 JMYQ8N9B5 988 aa24.17■■□□□ 1.46
NUP50-218ENST00000493456 MORC1Q86VD1 984 aa24.16■■□□□ 1.46
NUP50-218ENST00000493456 CLSPNQ9HAW4 1339 aa24.15■■□□□ 1.46
NUP50-218ENST00000493456 AKAP4Q5JQC9 854 aa24.15■■□□□ 1.46
NUP50-218ENST00000493456 SBF1O95248 1867 aa24.15■■□□□ 1.46
NUP50-218ENST00000493456 SOS1Q07889 1333 aaPredicted RBP24.14■■□□□ 1.46
NUP50-218ENST00000493456 USPL1Q5W0Q7 1092 aa24.14■■□□□ 1.45
NUP50-218ENST00000493456 RRAGCQ9HB90 399 aa24.14■■□□□ 1.45
NUP50-218ENST00000493456 MRC1P22897 1456 aa24.13■■□□□ 1.45
NUP50-218ENST00000493456 EIF4G2P78344 907 aaKnown RBP eCLIP24.13■■□□□ 1.45
NUP50-218ENST00000493456 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
NUP50-218ENST00000493456 IL13P35225 146 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms