RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
TSC22D4-205ENST00000493217 LGR6Q9HBX8 967 aa23.36■■□□□ 1.33
TSC22D4-205ENST00000493217 PXDNLA1KZ92 1463 aa23.35■■□□□ 1.33
TSC22D4-205ENST00000493217 CD2BP2O95400 341 aaKnown RBP23.34■■□□□ 1.33
TSC22D4-205ENST00000493217 MCM4P33991 863 aa23.34■■□□□ 1.33
TSC22D4-205ENST00000493217 ARHGEF25Q86VW2 580 aa23.34■■□□□ 1.33
TSC22D4-205ENST00000493217 N4BP2Q86UW6 1770 aaPredicted RBP23.34■■□□□ 1.33
TSC22D4-205ENST00000493217 EIF4A1P60842 406 aaKnown RBP23.33■■□□□ 1.33
TSC22D4-205ENST00000493217 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
TSC22D4-205ENST00000493217 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.33
TSC22D4-205ENST00000493217 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
TSC22D4-205ENST00000493217 RGPD2P0DJD1 1756 aa23.33■■□□□ 1.33
TSC22D4-205ENST00000493217 SLIT3O75094 1523 aa23.33■■□□□ 1.33
TSC22D4-205ENST00000493217 ZBTB7CA1YPR0 619 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 USP26Q9BXU7 913 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 PNMA6EA0A0J9YXQ4 647 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 PDE1AP54750 535 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 AKAP4Q5JQC9 854 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 USP44Q9H0E7 712 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 EXOC6BQ9Y2D4 811 aa23.32■■□□□ 1.32
TSC22D4-205ENST00000493217 HOXB7P09629 217 aa23.31■■□□□ 1.32
TSC22D4-205ENST00000493217 PHAXQ9H814 394 aaKnown RBP23.31■■□□□ 1.32
TSC22D4-205ENST00000493217 NCAPD2Q15021 1401 aa23.31■■□□□ 1.32
TSC22D4-205ENST00000493217 K7ELQ4 463 aaPredicted RBP23.31■■□□□ 1.32
TSC22D4-205ENST00000493217 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
TSC22D4-205ENST00000493217 SALL3Q9BXA9 1300 aa23.3■■□□□ 1.32
TSC22D4-205ENST00000493217 LMO7Q8WWI1 1683 aa23.3■■□□□ 1.32
TSC22D4-205ENST00000493217 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
TSC22D4-205ENST00000493217 CASC1Q6TDU7 716 aa23.3■■□□□ 1.32
TSC22D4-205ENST00000493217 CIZ1Q9ULV3 898 aaPredicted RBP23.3■■□□□ 1.32
TSC22D4-205ENST00000493217 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
TSC22D4-205ENST00000493217 LRRCC1Q9C099 1032 aa23.29■■□□□ 1.32
TSC22D4-205ENST00000493217 AMOTQ4VCS5 1084 aa23.29■■□□□ 1.32
TSC22D4-205ENST00000493217 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
TSC22D4-205ENST00000493217 LRRFIP2Q9Y608 721 aaKnown RBP23.29■■□□□ 1.32
TSC22D4-205ENST00000493217 IBTKQ9P2D0 1353 aaPredicted RBP23.28■■□□□ 1.32
TSC22D4-205ENST00000493217 CHMP4AQ9BY43 222 aa23.28■■□□□ 1.32
TSC22D4-205ENST00000493217 EIF2S2P20042 333 aaKnown RBP23.27■■□□□ 1.32
TSC22D4-205ENST00000493217 TEFQ10587 303 aa23.27■■□□□ 1.32
TSC22D4-205ENST00000493217 RABEP1Q15276 862 aa23.27■■□□□ 1.32
TSC22D4-205ENST00000493217 KCNQ3O43525 872 aa23.26■■□□□ 1.31
TSC22D4-205ENST00000493217 UBTFL1P0CB47 393 aaPredicted RBP23.26■■□□□ 1.31
TSC22D4-205ENST00000493217 TRPM3Q9HCF6 1732 aaPredicted RBP23.26■■□□□ 1.31
TSC22D4-205ENST00000493217 BTBD11A6QL63 1104 aa23.26■■□□□ 1.31
TSC22D4-205ENST00000493217 MPRIPQ6WCQ1 1025 aa23.26■■□□□ 1.31
TSC22D4-205ENST00000493217 ANKRD24Q8TF21 1146 aa23.25■■□□□ 1.31
TSC22D4-205ENST00000493217 CHPF2Q9P2E5 772 aa23.25■■□□□ 1.31
TSC22D4-205ENST00000493217 KRT28Q7Z3Y7 464 aa23.24■■□□□ 1.31
TSC22D4-205ENST00000493217 PROSER2Q86WR7 435 aaPredicted RBP23.24■■□□□ 1.31
TSC22D4-205ENST00000493217 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
TSC22D4-205ENST00000493217 SSH3Q8TE77 659 aa23.24■■□□□ 1.31
TSC22D4-205ENST00000493217 SRCIN1Q9C0H9 1055 aa23.24■■□□□ 1.31
TSC22D4-205ENST00000493217 AXIN2Q9Y2T1 843 aa23.24■■□□□ 1.31
TSC22D4-205ENST00000493217 RNMTO43148 476 aaKnown RBP23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 REC8O95072 547 aa23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 PXDNQ92626 1479 aa23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 MX1P20591 662 aa23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 RAB3GAP1Q15042 981 aa23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 C19orf44Q9H6X5 657 aa23.23■■□□□ 1.31
TSC22D4-205ENST00000493217 OVOS2A0A0G2JMS6 1433 aa23.22■■□□□ 1.31
TSC22D4-205ENST00000493217 ERC2O15083 957 aa23.22■■□□□ 1.31
TSC22D4-205ENST00000493217 HSP90AA1P07900 732 aaKnown RBP23.22■■□□□ 1.31
TSC22D4-205ENST00000493217 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
TSC22D4-205ENST00000493217 CAMTA1Q9Y6Y1 1673 aa23.22■■□□□ 1.31
TSC22D4-205ENST00000493217 MST1RQ04912 1400 aa23.22■■□□□ 1.31
TSC22D4-205ENST00000493217 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
TSC22D4-205ENST00000493217 TNPO1Q92973 898 aaKnown RBP23.21■■□□□ 1.31
TSC22D4-205ENST00000493217 STAP2Q9UGK3 403 aa23.21■■□□□ 1.31
TSC22D4-205ENST00000493217 BEND3Q5T5X7 828 aa23.21■■□□□ 1.31
TSC22D4-205ENST00000493217 IL27Q8NEV9 243 aa23.21■■□□□ 1.31
TSC22D4-205ENST00000493217 TUBGCP6Q96RT7 1819 aa23.21■■□□□ 1.31
TSC22D4-205ENST00000493217 PI4KAP2A4QPH2 592 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 DDX11L8A8MPP1 907 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 TSHZ3Q63HK5 1081 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 PI4KAP1Q8N8J0 262 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 DNAAF4Q8WXU2 420 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 BRPF3Q9ULD4 1205 aa23.2■■□□□ 1.3
TSC22D4-205ENST00000493217 TRAK2O60296 914 aa23.19■■□□□ 1.3
TSC22D4-205ENST00000493217 POLA2Q14181 598 aa23.19■■□□□ 1.3
TSC22D4-205ENST00000493217 HEG1Q9ULI3 1381 aa23.19■■□□□ 1.3
TSC22D4-205ENST00000493217 PPP1R42Q7Z4L9 355 aa23.18■■□□□ 1.3
TSC22D4-205ENST00000493217 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
TSC22D4-205ENST00000493217 NBPF7P0C2Y1 421 aaPredicted RBP23.18■■□□□ 1.3
TSC22D4-205ENST00000493217 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
TSC22D4-205ENST00000493217 ADCY9O60503 1353 aa23.17■■□□□ 1.3
TSC22D4-205ENST00000493217 ERBB3P21860 1342 aa23.17■■□□□ 1.3
TSC22D4-205ENST00000493217 RAB11FIP3O75154 756 aa23.17■■□□□ 1.3
TSC22D4-205ENST00000493217 GIGYF1O75420 1035 aaPredicted RBP23.17■■□□□ 1.3
TSC22D4-205ENST00000493217 ANXA1P04083 346 aa23.16■■□□□ 1.3
TSC22D4-205ENST00000493217 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
TSC22D4-205ENST00000493217 AOX1Q06278 1338 aa23.15■■□□□ 1.3
TSC22D4-205ENST00000493217 GBP4Q96PP9 640 aa23.15■■□□□ 1.3
TSC22D4-205ENST00000493217 ALS2Q96Q42 1657 aa23.14■■□□□ 1.3
TSC22D4-205ENST00000493217 ESYT1Q9BSJ8 1104 aa23.14■■□□□ 1.29
TSC22D4-205ENST00000493217 SRGAP3O43295 1099 aa23.13■■□□□ 1.29
TSC22D4-205ENST00000493217 SURF6O75683 361 aaKnown RBP23.13■■□□□ 1.29
TSC22D4-205ENST00000493217 RGPD5Q99666 1765 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms