RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 CFAP53Q96M91 514 aa31.87■■■□□ 2.69
CTDSP1-211ENST00000492545 LINC00116Q8NCU8 138 aa31.84■■■□□ 2.69
CTDSP1-211ENST00000492545 TAF1LQ8IZX4 1826 aa31.84■■■□□ 2.69
CTDSP1-211ENST00000492545 SSFA2P28290 1259 aa31.83■■■□□ 2.69
CTDSP1-211ENST00000492545 NFATC2IPQ8NCF5 419 aa31.83■■■□□ 2.69
CTDSP1-211ENST00000492545 TUBGCP6Q96RT7 1819 aa31.82■■■□□ 2.68
CTDSP1-211ENST00000492545 ITPK1Q13572 414 aa31.82■■■□□ 2.68
CTDSP1-211ENST00000492545 C4BP0C0L5 1744 aa31.82■■■□□ 2.68
CTDSP1-211ENST00000492545 COL3A1P02461 1466 aaPredicted RBP31.82■■■□□ 2.68
CTDSP1-211ENST00000492545 U2SURPO15042 1029 aaKnown RBP31.81■■■□□ 2.68
CTDSP1-211ENST00000492545 RBM42Q9BTD8 480 aaKnown RBP31.8■■■□□ 2.68
CTDSP1-211ENST00000492545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.79■■■□□ 2.68
CTDSP1-211ENST00000492545 COL24A1Q17RW2 1714 aa31.79■■■□□ 2.68
CTDSP1-211ENST00000492545 MTHFSDQ2M296 383 aaKnown RBP31.79■■■□□ 2.68
CTDSP1-211ENST00000492545 NUDCQ9Y266 331 aa31.79■■■□□ 2.68
CTDSP1-211ENST00000492545 PPP2R1AP30153 589 aa31.78■■■□□ 2.68
CTDSP1-211ENST00000492545 RC3H1Q5TC82 1133 aaKnown RBP31.77■■■□□ 2.68
CTDSP1-211ENST00000492545 SLC52A2Q9HAB3 445 aa31.77■■■□□ 2.68
CTDSP1-211ENST00000492545 SLC4A9Q96Q91 983 aa31.76■■■□□ 2.67
CTDSP1-211ENST00000492545 GNPATO15228 680 aa31.75■■■□□ 2.67
CTDSP1-211ENST00000492545 RNMTO43148 476 aaKnown RBP31.75■■■□□ 2.67
CTDSP1-211ENST00000492545 ZNF831Q5JPB2 1677 aa31.74■■■□□ 2.67
CTDSP1-211ENST00000492545 PHF14O94880 888 aa31.74■■■□□ 2.67
CTDSP1-211ENST00000492545 AMIGO3Q86WK7 504 aa31.74■■■□□ 2.67
CTDSP1-211ENST00000492545 GAS2L2Q8NHY3 880 aa31.74■■■□□ 2.67
CTDSP1-211ENST00000492545 LGR6Q9HBX8 967 aa31.74■■■□□ 2.67
CTDSP1-211ENST00000492545 RTCBQ9Y3I0 505 aaKnown RBP31.72■■■□□ 2.67
CTDSP1-211ENST00000492545 CNTNAP4Q9C0A0 1308 aa31.72■■■□□ 2.67
CTDSP1-211ENST00000492545 PTCD1O75127 700 aaKnown RBP31.71■■■□□ 2.67
CTDSP1-211ENST00000492545 ADRA2BP18089 450 aa31.71■■■□□ 2.67
CTDSP1-211ENST00000492545 MSL1Q68DK7 614 aa31.71■■■□□ 2.67
CTDSP1-211ENST00000492545 TRAPPC3LQ5T215 181 aa31.7■■■□□ 2.67
CTDSP1-211ENST00000492545 SCN11AQ9UI33 1791 aa31.7■■■□□ 2.67
CTDSP1-211ENST00000492545 UBR3Q6ZT12 1888 aa31.69■■■□□ 2.66
CTDSP1-211ENST00000492545 KLHL34Q8N239 644 aa31.68■■■□□ 2.66
CTDSP1-211ENST00000492545 GNAT3A8MTJ3 354 aa31.67■■■□□ 2.66
CTDSP1-211ENST00000492545 RPS6KA4O75676 772 aa31.67■■■□□ 2.66
CTDSP1-211ENST00000492545 MRC1P22897 1456 aa31.66■■■□□ 2.66
CTDSP1-211ENST00000492545 RSPH6AQ9H0K4 717 aa31.66■■■□□ 2.66
CTDSP1-211ENST00000492545 CD2APQ9Y5K6 639 aa31.66■■■□□ 2.66
CTDSP1-211ENST00000492545 FCHSD2O94868 740 aa31.65■■■□□ 2.66
CTDSP1-211ENST00000492545 U2AF1L5P0DN76 240 aaPredicted RBP31.65■■■□□ 2.66
CTDSP1-211ENST00000492545 U2AF1Q01081 240 aaKnown RBP eCLIP31.65■■■□□ 2.66
CTDSP1-211ENST00000492545 SMIM5Q71RC9 77 aa31.65■■■□□ 2.66
CTDSP1-211ENST00000492545 PRKAR2BP31323 418 aa31.64■■■□□ 2.66
CTDSP1-211ENST00000492545 YY1P25490 414 aa31.63■■■□□ 2.65
CTDSP1-211ENST00000492545 ADAMTS7Q9UKP4 1686 aa31.61■■■□□ 2.65
CTDSP1-211ENST00000492545 NLGN1Q8N2Q7 840 aa31.61■■■□□ 2.65
CTDSP1-211ENST00000492545 ARHGEF1Q92888 912 aaKnown RBP31.61■■■□□ 2.65
CTDSP1-211ENST00000492545 RFC4P35249 363 aa31.6■■■□□ 2.65
CTDSP1-211ENST00000492545 CRKLP46109 303 aaKnown RBP31.6■■■□□ 2.65
CTDSP1-211ENST00000492545 TEFQ10587 303 aa31.6■■■□□ 2.65
CTDSP1-211ENST00000492545 GPR162Q16538 588 aa31.6■■■□□ 2.65
CTDSP1-211ENST00000492545 VSIG10Q8N0Z9 540 aa31.6■■■□□ 2.65
CTDSP1-211ENST00000492545 PHACTR3Q96KR7 559 aa31.6■■■□□ 2.65
CTDSP1-211ENST00000492545 IL17REQ8NFR9 667 aa31.59■■■□□ 2.65
CTDSP1-211ENST00000492545 SLC39A6Q13433 755 aa31.58■■■□□ 2.65
CTDSP1-211ENST00000492545 NLGN2Q8NFZ4 835 aa31.58■■■□□ 2.65
CTDSP1-211ENST00000492545 COL5A3P25940 1745 aaPredicted RBP31.58■■■□□ 2.65
CTDSP1-211ENST00000492545 TTC5Q8N0Z6 440 aa31.56■■■□□ 2.64
CTDSP1-211ENST00000492545 RALBP1Q15311 655 aa31.55■■■□□ 2.64
CTDSP1-211ENST00000492545 DNAJC10Q8IXB1 793 aa31.55■■■□□ 2.64
CTDSP1-211ENST00000492545 CICQ96RK0 1608 aaPredicted RBP31.55■■■□□ 2.64
CTDSP1-211ENST00000492545 INTS5Q6P9B9 1019 aaKnown RBP31.54■■■□□ 2.64
CTDSP1-211ENST00000492545 CEMIPQ8WUJ3 1361 aa31.54■■■□□ 2.64
CTDSP1-211ENST00000492545 UTRNP46939 3433 aa31.53■■■□□ 2.64
CTDSP1-211ENST00000492545 CCDC87Q9NVE4 849 aa31.53■■■□□ 2.64
CTDSP1-211ENST00000492545 MMP10P09238 476 aa31.52■■■□□ 2.64
CTDSP1-211ENST00000492545 CYP19A1P11511 503 aaPredicted RBP31.52■■■□□ 2.64
CTDSP1-211ENST00000492545 MYH14Q7Z406 1995 aaKnown RBP31.51■■■□□ 2.63
CTDSP1-211ENST00000492545 HTATSF1O43719 755 aaKnown RBP31.51■■■□□ 2.63
CTDSP1-211ENST00000492545 NEFMP07197 916 aa31.51■■■□□ 2.63
CTDSP1-211ENST00000492545 GYS1P13807 737 aa31.51■■■□□ 2.63
CTDSP1-211ENST00000492545 ZNF790Q6PG37 636 aa31.51■■■□□ 2.63
CTDSP1-211ENST00000492545 RTF1Q92541 710 aaKnown RBP31.51■■■□□ 2.63
CTDSP1-211ENST00000492545 GRIN3BO60391 1043 aa31.5■■■□□ 2.63
CTDSP1-211ENST00000492545 TEX13AQ9BXU3 409 aaPredicted RBP31.5■■■□□ 2.63
CTDSP1-211ENST00000492545 KCPQ6ZWJ8 1503 aa31.49■■■□□ 2.63
CTDSP1-211ENST00000492545 STARD3NLO95772 234 aa31.49■■■□□ 2.63
CTDSP1-211ENST00000492545 DDX10Q13206 875 aaKnown RBP31.49■■■□□ 2.63
CTDSP1-211ENST00000492545 PNNQ9H307 717 aaKnown RBP31.49■■■□□ 2.63
CTDSP1-211ENST00000492545 PELP1Q8IZL8 1130 aaKnown RBP31.48■■■□□ 2.63
CTDSP1-211ENST00000492545 VIRMAQ69YN4 1812 aaKnown RBP31.47■■■□□ 2.63
CTDSP1-211ENST00000492545 TJP1Q07157 1748 aa31.47■■■□□ 2.63
CTDSP1-211ENST00000492545 USP42Q9H9J4 1324 aaKnown RBP31.46■■■□□ 2.63
CTDSP1-211ENST00000492545 GOLGB1Q14789 3259 aaKnown RBP31.45■■■□□ 2.63
CTDSP1-211ENST00000492545 ZNF496Q96IT1 587 aaPredicted RBP31.45■■■□□ 2.63
CTDSP1-211ENST00000492545 SOS1Q07889 1333 aaPredicted RBP31.45■■■□□ 2.62
CTDSP1-211ENST00000492545 BTBD11A6QL63 1104 aa31.44■■■□□ 2.62
CTDSP1-211ENST00000492545 FMNL2Q96PY5 1086 aa31.44■■■□□ 2.62
CTDSP1-211ENST00000492545 PARP3Q9Y6F1 533 aa31.44■■■□□ 2.62
CTDSP1-211ENST00000492545 ZPR1O75312 459 aa31.43■■■□□ 2.62
CTDSP1-211ENST00000492545 HEG1Q9ULI3 1381 aa31.43■■■□□ 2.62
CTDSP1-211ENST00000492545 ZEB1P37275 1124 aaPredicted RBP31.41■■■□□ 2.62
CTDSP1-211ENST00000492545 YBX3P16989 372 aaKnown RBP eCLIP31.4■■■□□ 2.62
CTDSP1-211ENST00000492545 TGFB2P61812 414 aa31.4■■■□□ 2.62
CTDSP1-211ENST00000492545 SRP68Q9UHB9 627 aaKnown RBP31.4■■■□□ 2.62
CTDSP1-211ENST00000492545 ZBTB1Q9Y2K1 713 aa31.4■■■□□ 2.62
CTDSP1-211ENST00000492545 UBR2Q8IWV8 1755 aa31.4■■■□□ 2.62
CTDSP1-211ENST00000492545 MCM10Q7L590 875 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms