RNA–Protein interactions for RNA: ENST00000491872.1

SVIL-212, Transcript of supervillin, humanhuman

TSL 5

Gene SVIL, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-212ENST00000491872 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
SVIL-212ENST00000491872 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
SVIL-212ENST00000491872 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
SVIL-212ENST00000491872 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
SVIL-212ENST00000491872 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
SVIL-212ENST00000491872 MRC1P22897 1456 aa13.36□□□□□ -0.27
SVIL-212ENST00000491872 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
SVIL-212ENST00000491872 MSL1Q68DK7 614 aa13.36□□□□□ -0.27
SVIL-212ENST00000491872 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
SVIL-212ENST00000491872 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
SVIL-212ENST00000491872 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
SVIL-212ENST00000491872 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
SVIL-212ENST00000491872 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
SVIL-212ENST00000491872 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
SVIL-212ENST00000491872 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
SVIL-212ENST00000491872 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
SVIL-212ENST00000491872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
SVIL-212ENST00000491872 CABP4P57796 275 aa13.34□□□□□ -0.27
SVIL-212ENST00000491872 NLGN2Q8NFZ4 835 aa13.34□□□□□ -0.27
SVIL-212ENST00000491872 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
SVIL-212ENST00000491872 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
SVIL-212ENST00000491872 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
SVIL-212ENST00000491872 AK7Q96M32 723 aa13.33□□□□□ -0.28
SVIL-212ENST00000491872 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
SVIL-212ENST00000491872 PHF14O94880 888 aa13.32□□□□□ -0.28
SVIL-212ENST00000491872 SSFA2P28290 1259 aa13.32□□□□□ -0.28
SVIL-212ENST00000491872 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
SVIL-212ENST00000491872 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
SVIL-212ENST00000491872 TJP1Q07157 1748 aa13.32□□□□□ -0.28
SVIL-212ENST00000491872 KCPQ6ZWJ8 1503 aa13.32□□□□□ -0.28
SVIL-212ENST00000491872 GNPATO15228 680 aa13.31□□□□□ -0.28
SVIL-212ENST00000491872 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
SVIL-212ENST00000491872 FLAD1Q8NFF5 587 aa13.31□□□□□ -0.28
SVIL-212ENST00000491872 IL17REQ8NFR9 667 aa13.31□□□□□ -0.28
SVIL-212ENST00000491872 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
SVIL-212ENST00000491872 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
SVIL-212ENST00000491872 MSH5O43196 834 aa13.3□□□□□ -0.28
SVIL-212ENST00000491872 POLD1P28340 1107 aa13.3□□□□□ -0.28
SVIL-212ENST00000491872 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
SVIL-212ENST00000491872 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
SVIL-212ENST00000491872 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
SVIL-212ENST00000491872 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
SVIL-212ENST00000491872 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
SVIL-212ENST00000491872 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
SVIL-212ENST00000491872 RPS6KA4O75676 772 aa13.28□□□□□ -0.28
SVIL-212ENST00000491872 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
SVIL-212ENST00000491872 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
SVIL-212ENST00000491872 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
SVIL-212ENST00000491872 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.29
SVIL-212ENST00000491872 DNAJC10Q8IXB1 793 aa13.27□□□□□ -0.29
SVIL-212ENST00000491872 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
SVIL-212ENST00000491872 GYS1P13807 737 aa13.26□□□□□ -0.29
SVIL-212ENST00000491872 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
SVIL-212ENST00000491872 UBR2Q8IWV8 1755 aa13.26□□□□□ -0.29
SVIL-212ENST00000491872 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
SVIL-212ENST00000491872 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
SVIL-212ENST00000491872 YY1P25490 414 aa13.25□□□□□ -0.29
SVIL-212ENST00000491872 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
SVIL-212ENST00000491872 RTCBQ9Y3I0 505 aaKnown RBP13.25□□□□□ -0.29
SVIL-212ENST00000491872 CD2APQ9Y5K6 639 aa13.25□□□□□ -0.29
SVIL-212ENST00000491872 GNAT3A8MTJ3 354 aa13.24□□□□□ -0.29
SVIL-212ENST00000491872 KCNQ3O43525 872 aa13.24□□□□□ -0.29
SVIL-212ENST00000491872 MMP10P09238 476 aa13.24□□□□□ -0.29
SVIL-212ENST00000491872 ADRA2BP18089 450 aa13.24□□□□□ -0.29
SVIL-212ENST00000491872 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
SVIL-212ENST00000491872 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
SVIL-212ENST00000491872 SRP68Q9UHB9 627 aaKnown RBP13.24□□□□□ -0.29
SVIL-212ENST00000491872 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
SVIL-212ENST00000491872 KIAA1551Q9HCM1 1747 aa13.23□□□□□ -0.29
SVIL-212ENST00000491872 FCHSD2O94868 740 aa13.23□□□□□ -0.29
SVIL-212ENST00000491872 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
SVIL-212ENST00000491872 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
SVIL-212ENST00000491872 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
SVIL-212ENST00000491872 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
SVIL-212ENST00000491872 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
SVIL-212ENST00000491872 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
SVIL-212ENST00000491872 ZBTB1Q9Y2K1 713 aa13.22□□□□□ -0.29
SVIL-212ENST00000491872 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.29
SVIL-212ENST00000491872 DDR1Q08345 913 aa13.21□□□□□ -0.29
SVIL-212ENST00000491872 FKBP8Q14318 412 aa13.21□□□□□ -0.29
SVIL-212ENST00000491872 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
SVIL-212ENST00000491872 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
SVIL-212ENST00000491872 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
SVIL-212ENST00000491872 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.3
SVIL-212ENST00000491872 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
SVIL-212ENST00000491872 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 GPR162Q16538 588 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 MCM10Q7L590 875 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 NLGN1Q8N2Q7 840 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 PXDNLA1KZ92 1463 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
SVIL-212ENST00000491872 RFC4P35249 363 aa13.19□□□□□ -0.3
SVIL-212ENST00000491872 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
SVIL-212ENST00000491872 CHD4Q14839 1912 aa13.18□□□□□ -0.3
SVIL-212ENST00000491872 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
SVIL-212ENST00000491872 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
SVIL-212ENST00000491872 TM4SF1P30408 202 aa13.18□□□□□ -0.3
SVIL-212ENST00000491872 KCNA3P22001 575 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms