RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 MSL1Q68DK7 614 aa13.21□□□□□ -0.29
HDAC7-225ENST00000491464 PHF14O94880 888 aa13.2□□□□□ -0.3
HDAC7-225ENST00000491464 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-225ENST00000491464 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
HDAC7-225ENST00000491464 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
HDAC7-225ENST00000491464 CHD4Q14839 1912 aa13.19□□□□□ -0.3
HDAC7-225ENST00000491464 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
HDAC7-225ENST00000491464 SSFA2P28290 1259 aa13.19□□□□□ -0.3
HDAC7-225ENST00000491464 GPR162Q16538 588 aa13.19□□□□□ -0.3
HDAC7-225ENST00000491464 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
HDAC7-225ENST00000491464 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
HDAC7-225ENST00000491464 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-225ENST00000491464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
HDAC7-225ENST00000491464 GNPATO15228 680 aa13.18□□□□□ -0.3
HDAC7-225ENST00000491464 ITPK1Q13572 414 aa13.18□□□□□ -0.3
HDAC7-225ENST00000491464 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
HDAC7-225ENST00000491464 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
HDAC7-225ENST00000491464 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
HDAC7-225ENST00000491464 HMOX1P09601 288 aa13.17□□□□□ -0.3
HDAC7-225ENST00000491464 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
HDAC7-225ENST00000491464 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
HDAC7-225ENST00000491464 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
HDAC7-225ENST00000491464 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
HDAC7-225ENST00000491464 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
HDAC7-225ENST00000491464 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
HDAC7-225ENST00000491464 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-225ENST00000491464 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
HDAC7-225ENST00000491464 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
HDAC7-225ENST00000491464 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
HDAC7-225ENST00000491464 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
HDAC7-225ENST00000491464 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
HDAC7-225ENST00000491464 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
HDAC7-225ENST00000491464 ADRA2BP18089 450 aa13.13□□□□□ -0.31
HDAC7-225ENST00000491464 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
HDAC7-225ENST00000491464 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
HDAC7-225ENST00000491464 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-225ENST00000491464 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
HDAC7-225ENST00000491464 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
HDAC7-225ENST00000491464 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
HDAC7-225ENST00000491464 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
HDAC7-225ENST00000491464 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
HDAC7-225ENST00000491464 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
HDAC7-225ENST00000491464 MRC1P22897 1456 aa13.1□□□□□ -0.31
HDAC7-225ENST00000491464 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
HDAC7-225ENST00000491464 RFC4P35249 363 aa13.1□□□□□ -0.31
HDAC7-225ENST00000491464 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
HDAC7-225ENST00000491464 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
HDAC7-225ENST00000491464 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-225ENST00000491464 MMP10P09238 476 aa13.09□□□□□ -0.31
HDAC7-225ENST00000491464 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
HDAC7-225ENST00000491464 TJP1Q07157 1748 aa13.09□□□□□ -0.31
HDAC7-225ENST00000491464 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
HDAC7-225ENST00000491464 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
HDAC7-225ENST00000491464 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
HDAC7-225ENST00000491464 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-225ENST00000491464 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
HDAC7-225ENST00000491464 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
HDAC7-225ENST00000491464 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC7-225ENST00000491464 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
HDAC7-225ENST00000491464 UTRNP46939 3433 aa13.07□□□□□ -0.32
HDAC7-225ENST00000491464 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 TEFQ10587 303 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
HDAC7-225ENST00000491464 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
HDAC7-225ENST00000491464 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-225ENST00000491464 GYS1P13807 737 aa13.05□□□□□ -0.32
HDAC7-225ENST00000491464 PRKAR2BP31323 418 aa13.05□□□□□ -0.32
HDAC7-225ENST00000491464 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC7-225ENST00000491464 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
HDAC7-225ENST00000491464 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
HDAC7-225ENST00000491464 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
HDAC7-225ENST00000491464 ZPR1O75312 459 aa13.03□□□□□ -0.32
HDAC7-225ENST00000491464 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
HDAC7-225ENST00000491464 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
HDAC7-225ENST00000491464 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
HDAC7-225ENST00000491464 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
HDAC7-225ENST00000491464 WWC3Q9ULE0 1092 aa13.03□□□□□ -0.32
HDAC7-225ENST00000491464 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
HDAC7-225ENST00000491464 STARD3NLO95772 234 aa13.02□□□□□ -0.33
HDAC7-225ENST00000491464 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-225ENST00000491464 TGFB2P61812 414 aa13.02□□□□□ -0.33
HDAC7-225ENST00000491464 C10orf71Q711Q0 1435 aa13.02□□□□□ -0.33
HDAC7-225ENST00000491464 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-225ENST00000491464 FCHSD2O94868 740 aa13.01□□□□□ -0.33
HDAC7-225ENST00000491464 NEFMP07197 916 aa13.01□□□□□ -0.33
HDAC7-225ENST00000491464 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
HDAC7-225ENST00000491464 RTF1Q92541 710 aaKnown RBP13.01□□□□□ -0.33
HDAC7-225ENST00000491464 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
HDAC7-225ENST00000491464 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-225ENST00000491464 COL15A1P39059 1388 aa13.01□□□□□ -0.33
HDAC7-225ENST00000491464 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
HDAC7-225ENST00000491464 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-225ENST00000491464 FKBP8Q14318 412 aa13□□□□□ -0.33
HDAC7-225ENST00000491464 ZNF790Q6PG37 636 aa13□□□□□ -0.33
HDAC7-225ENST00000491464 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
HDAC7-225ENST00000491464 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms