RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
PHC3-213ENST00000491258 XP32Q5T750 250 aa9.97□□□□□ -0.81
PHC3-213ENST00000491258 GNASQ5JWF2 1037 aa9.95□□□□□ -0.82
PHC3-213ENST00000491258 TMEM214Q6NUQ4 689 aaKnown RBP9.95□□□□□ -0.82
PHC3-213ENST00000491258 BEND7Q8N7W2 519 aaPredicted RBP9.95□□□□□ -0.82
PHC3-213ENST00000491258 TBC1D2BQ9UPU7 963 aa9.95□□□□□ -0.82
PHC3-213ENST00000491258 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
PHC3-213ENST00000491258 A0A1B0GTH6 734 aa9.93□□□□□ -0.82
PHC3-213ENST00000491258 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
PHC3-213ENST00000491258 ESCO1Q5FWF5 840 aa9.93□□□□□ -0.82
PHC3-213ENST00000491258 DOLKQ9UPQ8 538 aa9.93□□□□□ -0.82
PHC3-213ENST00000491258 THBS1P07996 1170 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 MAP2K3P46734 347 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 C4orf17Q53FE4 359 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 CFHR5Q9BXR6 569 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
PHC3-213ENST00000491258 FHDC1Q9C0D6 1143 aaPredicted RBP9.92□□□□□ -0.82
PHC3-213ENST00000491258 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 PHF24Q9UPV7 400 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 HRH3Q9Y5N1 445 aa9.92□□□□□ -0.82
PHC3-213ENST00000491258 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
PHC3-213ENST00000491258 SLFNL1Q499Z3 407 aa9.91□□□□□ -0.82
PHC3-213ENST00000491258 PGBD3Q8N328 593 aa9.91□□□□□ -0.82
PHC3-213ENST00000491258 DCAF5Q96JK2 942 aa9.91□□□□□ -0.82
PHC3-213ENST00000491258 RUBCNLQ9H714 662 aa9.91□□□□□ -0.82
PHC3-213ENST00000491258 OIP5O43482 229 aa9.9□□□□□ -0.82
PHC3-213ENST00000491258 STAU1O95793 577 aaKnown RBP9.9□□□□□ -0.82
PHC3-213ENST00000491258 USP4Q13107 963 aa9.9□□□□□ -0.82
PHC3-213ENST00000491258 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
PHC3-213ENST00000491258 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
PHC3-213ENST00000491258 MSX1P28360 303 aa9.89□□□□□ -0.83
PHC3-213ENST00000491258 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
PHC3-213ENST00000491258 ETNK1Q9HBU6 452 aa9.89□□□□□ -0.83
PHC3-213ENST00000491258 LRRC4BQ9NT99 713 aa9.89□□□□□ -0.83
PHC3-213ENST00000491258 ADAM23O75077 832 aa9.88□□□□□ -0.83
PHC3-213ENST00000491258 TLR1Q15399 786 aa9.88□□□□□ -0.83
PHC3-213ENST00000491258 KLRG1Q96E93 195 aa9.88□□□□□ -0.83
PHC3-213ENST00000491258 MSTNO14793 375 aa9.87□□□□□ -0.83
PHC3-213ENST00000491258 IRF5Q13568 498 aa9.87□□□□□ -0.83
PHC3-213ENST00000491258 LBRQ14739 615 aaKnown RBP9.87□□□□□ -0.83
PHC3-213ENST00000491258 EFHC2Q5JST6 749 aa9.87□□□□□ -0.83
PHC3-213ENST00000491258 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
PHC3-213ENST00000491258 RHBDD1Q8TEB9 315 aa9.87□□□□□ -0.83
PHC3-213ENST00000491258 VAC14Q08AM6 782 aa9.86□□□□□ -0.83
PHC3-213ENST00000491258 GALNT6Q8NCL4 622 aa9.86□□□□□ -0.83
PHC3-213ENST00000491258 SHISA8B8ZZ34 492 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 ITGB2P05107 769 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 BMP4P12644 408 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 SNRPNP63162 240 aaKnown RBP9.85□□□□□ -0.83
PHC3-213ENST00000491258 UBAP2LQ14157 1087 aaKnown RBP9.85□□□□□ -0.83
PHC3-213ENST00000491258 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
PHC3-213ENST00000491258 SIRT1Q96EB6 747 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 ABHD17AQ96GS6 310 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 RRAGCQ9HB90 399 aa9.85□□□□□ -0.83
PHC3-213ENST00000491258 ATXN7L1Q9ULK2 861 aaPredicted RBP9.85□□□□□ -0.83
PHC3-213ENST00000491258 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
PHC3-213ENST00000491258 C1orf229Q6ZS94 237 aaPredicted RBP9.84□□□□□ -0.83
PHC3-213ENST00000491258 SPOCK3Q9BQ16 436 aa9.84□□□□□ -0.83
PHC3-213ENST00000491258 GDF2Q9UK05 429 aaPredicted RBP9.84□□□□□ -0.83
PHC3-213ENST00000491258 ABL2P42684 1182 aa9.83□□□□□ -0.84
PHC3-213ENST00000491258 EDARADDQ8WWZ3 215 aa9.83□□□□□ -0.84
PHC3-213ENST00000491258 FGFR3P22607 806 aa9.82□□□□□ -0.84
PHC3-213ENST00000491258 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
PHC3-213ENST00000491258 GOLGA6L1Q8N7Z2 621 aa9.82□□□□□ -0.84
PHC3-213ENST00000491258 KRTAP4-8Q9BYQ9 185 aa9.82□□□□□ -0.84
PHC3-213ENST00000491258 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
PHC3-213ENST00000491258 MKL2Q9ULH7 1088 aa9.82□□□□□ -0.84
PHC3-213ENST00000491258 C2CD2LO14523 706 aa9.81□□□□□ -0.84
PHC3-213ENST00000491258 AMPD1P23109 780 aa9.81□□□□□ -0.84
PHC3-213ENST00000491258 GDF10P55107 478 aa9.81□□□□□ -0.84
PHC3-213ENST00000491258 BNIP3LO60238 219 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 PROCP04070 461 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 SCNN1DP51172 638 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 CTBSQ01459 385 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 AIDAQ96BJ3 306 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 CRISPLD1Q9H336 500 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 CHIC2Q9UKJ5 165 aa9.8□□□□□ -0.84
PHC3-213ENST00000491258 INHAP05111 366 aa9.79□□□□□ -0.84
PHC3-213ENST00000491258 PLPP7Q8NBV4 271 aa9.79□□□□□ -0.84
PHC3-213ENST00000491258 NDFIP2Q9NV92 336 aa9.79□□□□□ -0.84
PHC3-213ENST00000491258 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
PHC3-213ENST00000491258 FIGNL1Q6PIW4 674 aa9.78□□□□□ -0.84
PHC3-213ENST00000491258 NIFKQ9BYG3 293 aaKnown RBP9.78□□□□□ -0.84
PHC3-213ENST00000491258 SERTAD1Q9UHV2 236 aa9.78□□□□□ -0.84
PHC3-213ENST00000491258 SEMA3FQ13275 785 aa9.77□□□□□ -0.85
PHC3-213ENST00000491258 WASHC4Q2M389 1173 aa9.77□□□□□ -0.85
PHC3-213ENST00000491258 MAP7D1Q3KQU3 841 aa9.77□□□□□ -0.85
PHC3-213ENST00000491258 SLCO4C1Q6ZQN7 724 aa9.77□□□□□ -0.85
PHC3-213ENST00000491258 ZCCHC2Q9C0B9 1178 aaKnown RBP9.77□□□□□ -0.85
PHC3-213ENST00000491258 KRBA1A5PL33 1030 aa9.76□□□□□ -0.85
PHC3-213ENST00000491258 SMTNP53814 917 aa9.76□□□□□ -0.85
PHC3-213ENST00000491258 PCDHGC4Q9Y5F7 938 aa9.76□□□□□ -0.85
PHC3-213ENST00000491258 ATP4AP20648 1035 aa9.75□□□□□ -0.85
PHC3-213ENST00000491258 GRIN2CQ14957 1233 aa9.75□□□□□ -0.85
PHC3-213ENST00000491258 C1orf216Q8TAB5 229 aa9.75□□□□□ -0.85
PHC3-213ENST00000491258 DNAAF2Q9NVR5 837 aaKnown RBP9.75□□□□□ -0.85
PHC3-213ENST00000491258 NEURL1BA8MQ27 555 aa9.74□□□□□ -0.85
PHC3-213ENST00000491258 ATXN7O15265 892 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms