RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
SMG5-205ENST00000489907 PHF14O94880 888 aa11.32□□□□□ -0.6
SMG5-205ENST00000489907 EIF4A2Q14240 407 aaKnown RBP11.32□□□□□ -0.6
SMG5-205ENST00000489907 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
SMG5-205ENST00000489907 AK7Q96M32 723 aa11.32□□□□□ -0.6
SMG5-205ENST00000489907 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
SMG5-205ENST00000489907 PPM1GO15355 546 aaPredicted RBP11.31□□□□□ -0.6
SMG5-205ENST00000489907 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
SMG5-205ENST00000489907 PLEKHG2Q9H7P9 1386 aa11.3□□□□□ -0.6
SMG5-205ENST00000489907 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
SMG5-205ENST00000489907 TMOD3Q9NYL9 352 aa11.3□□□□□ -0.6
SMG5-205ENST00000489907 C4AP0C0L4 1744 aa11.29□□□□□ -0.6
SMG5-205ENST00000489907 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
SMG5-205ENST00000489907 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
SMG5-205ENST00000489907 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
SMG5-205ENST00000489907 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
SMG5-205ENST00000489907 ADAMTS7Q9UKP4 1686 aa11.28□□□□□ -0.6
SMG5-205ENST00000489907 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
SMG5-205ENST00000489907 KIF3CO14782 793 aa11.28□□□□□ -0.6
SMG5-205ENST00000489907 GNPATO15228 680 aa11.28□□□□□ -0.6
SMG5-205ENST00000489907 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
SMG5-205ENST00000489907 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
SMG5-205ENST00000489907 MMP10P09238 476 aa11.27□□□□□ -0.61
SMG5-205ENST00000489907 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
SMG5-205ENST00000489907 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
SMG5-205ENST00000489907 TJP1Q07157 1748 aa11.26□□□□□ -0.61
SMG5-205ENST00000489907 GYS1P13807 737 aa11.26□□□□□ -0.61
SMG5-205ENST00000489907 KCNA3P22001 575 aa11.26□□□□□ -0.61
SMG5-205ENST00000489907 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
SMG5-205ENST00000489907 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
SMG5-205ENST00000489907 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
SMG5-205ENST00000489907 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
SMG5-205ENST00000489907 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 HSPA6P17066 643 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 TGFB2P61812 414 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 IFFO2Q5TF58 517 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 NLGN1Q8N2Q7 840 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
SMG5-205ENST00000489907 DCAF5Q96JK2 942 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 PANK3Q9H999 370 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 CNTNAP4Q9C0A0 1308 aa11.25□□□□□ -0.61
SMG5-205ENST00000489907 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
SMG5-205ENST00000489907 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
SMG5-205ENST00000489907 RTCBQ9Y3I0 505 aaKnown RBP11.24□□□□□ -0.61
SMG5-205ENST00000489907 SBF1O95248 1867 aa11.23□□□□□ -0.61
SMG5-205ENST00000489907 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
SMG5-205ENST00000489907 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
SMG5-205ENST00000489907 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
SMG5-205ENST00000489907 HSPA5P11021 654 aaKnown RBP11.22□□□□□ -0.61
SMG5-205ENST00000489907 DPEP1P16444 411 aa11.22□□□□□ -0.61
SMG5-205ENST00000489907 IL13P35225 146 aa11.22□□□□□ -0.61
SMG5-205ENST00000489907 AMOTQ4VCS5 1084 aa11.22□□□□□ -0.61
SMG5-205ENST00000489907 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
SMG5-205ENST00000489907 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
SMG5-205ENST00000489907 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
SMG5-205ENST00000489907 CABP4P57796 275 aa11.21□□□□□ -0.61
SMG5-205ENST00000489907 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.61
SMG5-205ENST00000489907 INTS5Q6P9B9 1019 aaKnown RBP11.21□□□□□ -0.61
SMG5-205ENST00000489907 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
SMG5-205ENST00000489907 TM4SF1P30408 202 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 RFC4P35249 363 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
SMG5-205ENST00000489907 MTHFSP49914 203 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 DDR1Q08345 913 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 FKBP8Q14318 412 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
SMG5-205ENST00000489907 BCS1LQ9Y276 419 aa11.2□□□□□ -0.62
SMG5-205ENST00000489907 AFDNP55196 1824 aaKnown RBP11.2□□□□□ -0.62
SMG5-205ENST00000489907 NRXN2Q9P2S2 1712 aa11.19□□□□□ -0.62
SMG5-205ENST00000489907 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
SMG5-205ENST00000489907 EIF4G2P78344 907 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMG5-205ENST00000489907 SULT6B1Q6IMI4 303 aa11.19□□□□□ -0.62
SMG5-205ENST00000489907 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
SMG5-205ENST00000489907 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
SMG5-205ENST00000489907 TOMM70O94826 608 aa11.18□□□□□ -0.62
SMG5-205ENST00000489907 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
SMG5-205ENST00000489907 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
SMG5-205ENST00000489907 LGR6Q9HBX8 967 aa11.18□□□□□ -0.62
SMG5-205ENST00000489907 PARP3Q9Y6F1 533 aa11.18□□□□□ -0.62
SMG5-205ENST00000489907 POLRMTO00411 1230 aaKnown RBP11.17□□□□□ -0.62
SMG5-205ENST00000489907 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
SMG5-205ENST00000489907 FCHSD2O94868 740 aa11.17□□□□□ -0.62
SMG5-205ENST00000489907 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
SMG5-205ENST00000489907 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
SMG5-205ENST00000489907 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
SMG5-205ENST00000489907 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
SMG5-205ENST00000489907 MRC1P22897 1456 aa11.17□□□□□ -0.62
SMG5-205ENST00000489907 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
SMG5-205ENST00000489907 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
SMG5-205ENST00000489907 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
SMG5-205ENST00000489907 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
SMG5-205ENST00000489907 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
SMG5-205ENST00000489907 PIM2Q9P1W9 311 aa11.16□□□□□ -0.62
SMG5-205ENST00000489907 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
SMG5-205ENST00000489907 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
SMG5-205ENST00000489907 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
SMG5-205ENST00000489907 CHRNA5P30532 468 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms