RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
HUWE1-213ENST00000489876 ARHGEF10O15013 1369 aa11.63□□□□□ -0.55
HUWE1-213ENST00000489876 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
HUWE1-213ENST00000489876 NRKQ7Z2Y5 1582 aa11.62□□□□□ -0.55
HUWE1-213ENST00000489876 RGPD5Q99666 1765 aa11.62□□□□□ -0.55
HUWE1-213ENST00000489876 CHRNA2Q15822 529 aa11.62□□□□□ -0.55
HUWE1-213ENST00000489876 ZFRQ96KR1 1074 aaKnown RBP11.62□□□□□ -0.55
HUWE1-213ENST00000489876 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
HUWE1-213ENST00000489876 COL14A1Q05707 1796 aaKnown RBP11.62□□□□□ -0.55
HUWE1-213ENST00000489876 HAP1P54257 671 aaPredicted RBP11.61□□□□□ -0.55
HUWE1-213ENST00000489876 UNC5CLQ8IV45 518 aa11.61□□□□□ -0.55
HUWE1-213ENST00000489876 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
HUWE1-213ENST00000489876 TRPC5Q9UL62 973 aaPredicted RBP11.61□□□□□ -0.55
HUWE1-213ENST00000489876 MON2Q7Z3U7 1717 aa11.6□□□□□ -0.55
HUWE1-213ENST00000489876 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
HUWE1-213ENST00000489876 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
HUWE1-213ENST00000489876 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
HUWE1-213ENST00000489876 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
HUWE1-213ENST00000489876 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
HUWE1-213ENST00000489876 OSBPP22059 807 aa11.59□□□□□ -0.55
HUWE1-213ENST00000489876 LAPTM4BQ86VI4 370 aa11.59□□□□□ -0.55
HUWE1-213ENST00000489876 GJD4Q96KN9 370 aaPredicted RBP11.59□□□□□ -0.55
HUWE1-213ENST00000489876 USP6P35125 1406 aa11.59□□□□□ -0.55
HUWE1-213ENST00000489876 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
HUWE1-213ENST00000489876 SOWAHBA6NEL2 793 aa11.58□□□□□ -0.56
HUWE1-213ENST00000489876 BTG4Q9NY30 223 aa11.58□□□□□ -0.56
HUWE1-213ENST00000489876 LMO7Q8WWI1 1683 aa11.58□□□□□ -0.56
HUWE1-213ENST00000489876 CAMTA1Q9Y6Y1 1673 aa11.58□□□□□ -0.56
HUWE1-213ENST00000489876 EVC2Q86UK5 1308 aa11.58□□□□□ -0.56
HUWE1-213ENST00000489876 COL18A1P39060 1754 aa11.57□□□□□ -0.56
HUWE1-213ENST00000489876 ABTB2Q8N961 1025 aa11.57□□□□□ -0.56
HUWE1-213ENST00000489876 TESK2Q96S53 571 aa11.57□□□□□ -0.56
HUWE1-213ENST00000489876 EP400Q96L91 3159 aa11.57□□□□□ -0.56
HUWE1-213ENST00000489876 ST20-MTHFSA0A0A6YYL1 179 aa11.56□□□□□ -0.56
HUWE1-213ENST00000489876 SMAPO00193 183 aa11.56□□□□□ -0.56
HUWE1-213ENST00000489876 VPS72Q15906 364 aa11.56□□□□□ -0.56
HUWE1-213ENST00000489876 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
HUWE1-213ENST00000489876 WBP1LQ9NX94 342 aa11.56□□□□□ -0.56
HUWE1-213ENST00000489876 USP19O94966 1318 aa11.56□□□□□ -0.56
HUWE1-213ENST00000489876 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
HUWE1-213ENST00000489876 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
HUWE1-213ENST00000489876 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
HUWE1-213ENST00000489876 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
HUWE1-213ENST00000489876 PRDM11Q9NQV5 511 aa11.55□□□□□ -0.56
HUWE1-213ENST00000489876 CCDC9Q9Y3X0 531 aaKnown RBP11.55□□□□□ -0.56
HUWE1-213ENST00000489876 SLIT3O75094 1523 aa11.55□□□□□ -0.56
HUWE1-213ENST00000489876 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
HUWE1-213ENST00000489876 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
HUWE1-213ENST00000489876 TTC21BQ7Z4L5 1316 aa11.54□□□□□ -0.56
HUWE1-213ENST00000489876 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
HUWE1-213ENST00000489876 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
HUWE1-213ENST00000489876 PRSS12P56730 875 aa11.53□□□□□ -0.56
HUWE1-213ENST00000489876 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
HUWE1-213ENST00000489876 GCP02774 474 aa11.52□□□□□ -0.57
HUWE1-213ENST00000489876 NME9Q86XW9 330 aa11.52□□□□□ -0.57
HUWE1-213ENST00000489876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.52□□□□□ -0.57
HUWE1-213ENST00000489876 TMC1Q8TDI8 760 aa11.52□□□□□ -0.57
HUWE1-213ENST00000489876 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
HUWE1-213ENST00000489876 MYOM1P52179 1685 aa11.52□□□□□ -0.57
HUWE1-213ENST00000489876 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.57
HUWE1-213ENST00000489876 USP47Q96K76 1375 aa11.52□□□□□ -0.57
HUWE1-213ENST00000489876 LTN1O94822 1766 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 NFAT5O94916 1531 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
HUWE1-213ENST00000489876 USP54Q70EL1 1684 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 SPATA31A5Q5VU36 1347 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 SPATA31A7Q8IWB4 1347 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
HUWE1-213ENST00000489876 FBLN1P23142 703 aa11.5□□□□□ -0.57
HUWE1-213ENST00000489876 MLLT3P42568 568 aaPredicted RBP11.5□□□□□ -0.57
HUWE1-213ENST00000489876 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
HUWE1-213ENST00000489876 USP35Q9P2H5 1018 aa11.5□□□□□ -0.57
HUWE1-213ENST00000489876 A0A1W2PP64 1363 aa11.5□□□□□ -0.57
HUWE1-213ENST00000489876 WNK3Q9BYP7 1800 aa11.49□□□□□ -0.57
HUWE1-213ENST00000489876 NLRP13Q86W25 1043 aa11.49□□□□□ -0.57
HUWE1-213ENST00000489876 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-213ENST00000489876 NPDC1Q9NQX5 325 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-213ENST00000489876 SPATA31A1Q5TZJ5 1347 aa11.49□□□□□ -0.57
HUWE1-213ENST00000489876 CPDO75976 1380 aa11.49□□□□□ -0.57
HUWE1-213ENST00000489876 COL5A2P05997 1499 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-213ENST00000489876 RGPD2P0DJD1 1756 aa11.49□□□□□ -0.57
HUWE1-213ENST00000489876 A0A0G2JS52 829 aa11.48□□□□□ -0.57
HUWE1-213ENST00000489876 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.48□□□□□ -0.57
HUWE1-213ENST00000489876 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
HUWE1-213ENST00000489876 MYT1Q01538 1121 aa11.47□□□□□ -0.57
HUWE1-213ENST00000489876 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
HUWE1-213ENST00000489876 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.57
HUWE1-213ENST00000489876 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
HUWE1-213ENST00000489876 LRCH3Q96II8 777 aa11.46□□□□□ -0.57
HUWE1-213ENST00000489876 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
HUWE1-213ENST00000489876 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
HUWE1-213ENST00000489876 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
HUWE1-213ENST00000489876 ARHGEF25Q86VW2 580 aa11.45□□□□□ -0.58
HUWE1-213ENST00000489876 TATDN2Q93075 761 aa11.45□□□□□ -0.58
HUWE1-213ENST00000489876 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
HUWE1-213ENST00000489876 TTC21AQ8NDW8 1320 aa11.44□□□□□ -0.58
HUWE1-213ENST00000489876 EVA1CP58658 441 aa11.44□□□□□ -0.58
HUWE1-213ENST00000489876 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
HUWE1-213ENST00000489876 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms