RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 SLIT3O75094 1523 aa13.19□□□□□ -0.3
ABCD4-214ENST00000489678 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
ABCD4-214ENST00000489678 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
ABCD4-214ENST00000489678 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
ABCD4-214ENST00000489678 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
ABCD4-214ENST00000489678 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-214ENST00000489678 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
ABCD4-214ENST00000489678 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
ABCD4-214ENST00000489678 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 BCL9LQ86UU0 1499 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 TRIM37O94972 964 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 RLBP1P12271 317 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 PDE4AP27815 886 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
ABCD4-214ENST00000489678 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
ABCD4-214ENST00000489678 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 CPDO75976 1380 aa13.18□□□□□ -0.3
ABCD4-214ENST00000489678 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
ABCD4-214ENST00000489678 PIGBQ92521 554 aa13.17□□□□□ -0.3
ABCD4-214ENST00000489678 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
ABCD4-214ENST00000489678 KDRP35968 1356 aa13.17□□□□□ -0.3
ABCD4-214ENST00000489678 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 BACH2Q9BYV9 841 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
ABCD4-214ENST00000489678 CRB1P82279 1406 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 A1BGP04217 495 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 MS4A1P11836 297 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-214ENST00000489678 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
ABCD4-214ENST00000489678 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 PCNTO95613 3336 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
ABCD4-214ENST00000489678 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
ABCD4-214ENST00000489678 APBB1O00213 710 aa13.14□□□□□ -0.31
ABCD4-214ENST00000489678 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
ABCD4-214ENST00000489678 GNAI1P63096 354 aa13.14□□□□□ -0.31
ABCD4-214ENST00000489678 CCDC27Q2M243 656 aa13.14□□□□□ -0.31
ABCD4-214ENST00000489678 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
ABCD4-214ENST00000489678 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
ABCD4-214ENST00000489678 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
ABCD4-214ENST00000489678 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
ABCD4-214ENST00000489678 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
ABCD4-214ENST00000489678 PHF14O94880 888 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 FNBP4Q8N3X1 1017 aaPredicted RBP13.13□□□□□ -0.31
ABCD4-214ENST00000489678 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 VAMP4O75379 141 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
ABCD4-214ENST00000489678 CHL1O00533 1208 aa13.12□□□□□ -0.31
ABCD4-214ENST00000489678 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
ABCD4-214ENST00000489678 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
ABCD4-214ENST00000489678 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
ABCD4-214ENST00000489678 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
ABCD4-214ENST00000489678 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
ABCD4-214ENST00000489678 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
ABCD4-214ENST00000489678 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
ABCD4-214ENST00000489678 TRPC5Q9UL62 973 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-214ENST00000489678 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-214ENST00000489678 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-214ENST00000489678 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 COL18A1P39060 1754 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 VPS72Q15906 364 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
ABCD4-214ENST00000489678 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 ATP5J2-PTCD1G3V325 749 aa13.1□□□□□ -0.31
ABCD4-214ENST00000489678 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
ABCD4-214ENST00000489678 IGHDP01880 384 aa13.09□□□□□ -0.31
ABCD4-214ENST00000489678 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
ABCD4-214ENST00000489678 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
ABCD4-214ENST00000489678 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
ABCD4-214ENST00000489678 ABCA3Q99758 1704 aa13.08□□□□□ -0.31
ABCD4-214ENST00000489678 TRIM27P14373 513 aa13.08□□□□□ -0.32
ABCD4-214ENST00000489678 RXRBP28702 533 aa13.08□□□□□ -0.32
ABCD4-214ENST00000489678 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
ABCD4-214ENST00000489678 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
ABCD4-214ENST00000489678 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
ABCD4-214ENST00000489678 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
ABCD4-214ENST00000489678 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
ABCD4-214ENST00000489678 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
ABCD4-214ENST00000489678 SLIT2O94813 1529 aa13.07□□□□□ -0.32
ABCD4-214ENST00000489678 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
ABCD4-214ENST00000489678 CRYBG1Q9Y4K1 1723 aa13.06□□□□□ -0.32
ABCD4-214ENST00000489678 GPTP24298 496 aa13.06□□□□□ -0.32
ABCD4-214ENST00000489678 RGS3P49796 1198 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms