RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
SF1-218ENST00000489544 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
SF1-218ENST00000489544 BAG6P46379 1132 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 CCDC125Q86Z20 511 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 PROM2Q8N271 834 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 CAMKK2Q96RR4 588 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 BTAF1O14981 1849 aa10.92□□□□□ -0.66
SF1-218ENST00000489544 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 ITGB4P16144 1822 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 SCN11AQ9UI33 1791 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 KCNQ3O43525 872 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 TEFQ10587 303 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 ADAMTS7Q9UKP4 1686 aa10.91□□□□□ -0.66
SF1-218ENST00000489544 MRC1P22897 1456 aa10.9□□□□□ -0.66
SF1-218ENST00000489544 PLSCR1O15162 318 aa10.9□□□□□ -0.66
SF1-218ENST00000489544 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
SF1-218ENST00000489544 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
SF1-218ENST00000489544 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
SF1-218ENST00000489544 PALLDQ8WX93 1383 aa10.9□□□□□ -0.67
SF1-218ENST00000489544 PTCD1O75127 700 aaKnown RBP10.89□□□□□ -0.67
SF1-218ENST00000489544 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
SF1-218ENST00000489544 SRCAPQ6ZRS2 3230 aa10.89□□□□□ -0.67
SF1-218ENST00000489544 VIRMAQ69YN4 1812 aaKnown RBP10.88□□□□□ -0.67
SF1-218ENST00000489544 BTBD11A6QL63 1104 aa10.88□□□□□ -0.67
SF1-218ENST00000489544 TAF7Q15545 349 aaPredicted RBP10.88□□□□□ -0.67
SF1-218ENST00000489544 RBM42Q9BTD8 480 aaKnown RBP10.88□□□□□ -0.67
SF1-218ENST00000489544 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
SF1-218ENST00000489544 LOC102724428A0A0B4J2F2 783 aa10.87□□□□□ -0.67
SF1-218ENST00000489544 SIK1P57059 783 aa10.87□□□□□ -0.67
SF1-218ENST00000489544 LMOD3Q0VAK6 560 aa10.87□□□□□ -0.67
SF1-218ENST00000489544 SMARCC1Q92922 1105 aaPredicted RBP10.87□□□□□ -0.67
SF1-218ENST00000489544 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
SF1-218ENST00000489544 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
SF1-218ENST00000489544 ITPK1Q13572 414 aa10.86□□□□□ -0.67
SF1-218ENST00000489544 ZNF790Q6PG37 636 aa10.86□□□□□ -0.67
SF1-218ENST00000489544 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
SF1-218ENST00000489544 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
SF1-218ENST00000489544 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
SF1-218ENST00000489544 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
SF1-218ENST00000489544 PRAMEF22A3QJZ6 481 aa10.85□□□□□ -0.67
SF1-218ENST00000489544 ATP6V1AP38606 617 aa10.85□□□□□ -0.67
SF1-218ENST00000489544 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
SF1-218ENST00000489544 TSPYL4Q9UJ04 414 aa10.85□□□□□ -0.67
SF1-218ENST00000489544 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 ZNF827Q17R98 1081 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 KRT24Q2M2I5 525 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 DNAJC10Q8IXB1 793 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 LINC00116Q8NCU8 138 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
SF1-218ENST00000489544 LY75O60449 1722 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
SF1-218ENST00000489544 CHL1O00533 1208 aa10.83□□□□□ -0.68
SF1-218ENST00000489544 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
SF1-218ENST00000489544 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
SF1-218ENST00000489544 RREB1Q92766 1687 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 NUP188Q5SRE5 1749 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 ZNF853P0CG23 659 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 EIF4A1P60842 406 aaKnown RBP10.82□□□□□ -0.68
SF1-218ENST00000489544 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
SF1-218ENST00000489544 AMIGO3Q86WK7 504 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 MBIPQ9NS73 344 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 ZNF521Q96K83 1311 aa10.82□□□□□ -0.68
SF1-218ENST00000489544 HEG1Q9ULI3 1381 aa10.81□□□□□ -0.68
SF1-218ENST00000489544 RGPD3A6NKT7 1758 aaPredicted RBP10.81□□□□□ -0.68
SF1-218ENST00000489544 RGPD4Q7Z3J3 1758 aa10.81□□□□□ -0.68
SF1-218ENST00000489544 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
SF1-218ENST00000489544 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
SF1-218ENST00000489544 IFT57Q9NWB7 429 aa10.81□□□□□ -0.68
SF1-218ENST00000489544 USP16Q9Y5T5 823 aa10.81□□□□□ -0.68
SF1-218ENST00000489544 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
SF1-218ENST00000489544 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
SF1-218ENST00000489544 AKT1S1Q96B36 256 aa10.8□□□□□ -0.68
SF1-218ENST00000489544 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
SF1-218ENST00000489544 PDGFDQ9GZP0 370 aaPredicted RBP10.8□□□□□ -0.68
SF1-218ENST00000489544 KDM3BQ7LBC6 1761 aa10.8□□□□□ -0.68
SF1-218ENST00000489544 UBR2Q8IWV8 1755 aa10.8□□□□□ -0.68
SF1-218ENST00000489544 TJP1Q07157 1748 aa10.79□□□□□ -0.68
SF1-218ENST00000489544 ELL2O00472 640 aaPredicted RBP10.79□□□□□ -0.68
SF1-218ENST00000489544 GIGYF1O75420 1035 aaPredicted RBP10.79□□□□□ -0.68
SF1-218ENST00000489544 CYP19A1P11511 503 aaPredicted RBP10.79□□□□□ -0.68
SF1-218ENST00000489544 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
SF1-218ENST00000489544 GNAI1P63096 354 aa10.79□□□□□ -0.68
SF1-218ENST00000489544 CALD1Q05682 793 aaKnown RBP10.79□□□□□ -0.68
SF1-218ENST00000489544 SLC15A2Q16348 729 aa10.79□□□□□ -0.68
SF1-218ENST00000489544 WDR63Q8IWG1 891 aa10.79□□□□□ -0.68
SF1-218ENST00000489544 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
SF1-218ENST00000489544 STK32BQ9NY57 414 aa10.79□□□□□ -0.68
SF1-218ENST00000489544 GNPATO15228 680 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 PHF14O94880 888 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 A1BGP04217 495 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 SNRPA1P09661 255 aaKnown RBP10.78□□□□□ -0.68
SF1-218ENST00000489544 NBPF14Q5TI25 921 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms