RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 MCM10Q7L590 875 aa20.99■□□□□ 0.95
HDAC7-224ENST00000488927 RGPD3A6NKT7 1758 aaPredicted RBP20.99■□□□□ 0.95
HDAC7-224ENST00000488927 RGPD4Q7Z3J3 1758 aa20.99■□□□□ 0.95
HDAC7-224ENST00000488927 ITGB4P16144 1822 aa20.99■□□□□ 0.95
HDAC7-224ENST00000488927 NCBP3Q53F19 620 aaKnown RBP20.98■□□□□ 0.95
HDAC7-224ENST00000488927 NEUROD2Q15784 382 aa20.97■□□□□ 0.95
HDAC7-224ENST00000488927 SLC27A3Q5K4L6 730 aa20.97■□□□□ 0.95
HDAC7-224ENST00000488927 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
HDAC7-224ENST00000488927 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
HDAC7-224ENST00000488927 EZH2Q15910 746 aaKnown RBP20.96■□□□□ 0.95
HDAC7-224ENST00000488927 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
HDAC7-224ENST00000488927 DCTN1Q14203 1278 aa20.95■□□□□ 0.94
HDAC7-224ENST00000488927 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
HDAC7-224ENST00000488927 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
HDAC7-224ENST00000488927 TXNRD1Q16881 649 aa20.94■□□□□ 0.94
HDAC7-224ENST00000488927 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
HDAC7-224ENST00000488927 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
HDAC7-224ENST00000488927 TRIM35Q9UPQ4 493 aa20.93■□□□□ 0.94
HDAC7-224ENST00000488927 DLG5Q8TDM6 1919 aa20.93■□□□□ 0.94
HDAC7-224ENST00000488927 BTBD11A6QL63 1104 aa20.92■□□□□ 0.94
HDAC7-224ENST00000488927 CALD1Q05682 793 aaKnown RBP20.92■□□□□ 0.94
HDAC7-224ENST00000488927 TTC5Q8N0Z6 440 aa20.92■□□□□ 0.94
HDAC7-224ENST00000488927 CCNL1Q9UK58 526 aaPredicted RBP20.92■□□□□ 0.94
HDAC7-224ENST00000488927 VIRMAQ69YN4 1812 aaKnown RBP20.91■□□□□ 0.94
HDAC7-224ENST00000488927 PROM2Q8N271 834 aa20.91■□□□□ 0.94
HDAC7-224ENST00000488927 BABAM1Q9NWV8 329 aa20.91■□□□□ 0.94
HDAC7-224ENST00000488927 LOC102724428A0A0B4J2F2 783 aa20.9■□□□□ 0.94
HDAC7-224ENST00000488927 SIK1P57059 783 aa20.9■□□□□ 0.94
HDAC7-224ENST00000488927 ZNF790Q6PG37 636 aa20.9■□□□□ 0.94
HDAC7-224ENST00000488927 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.93
HDAC7-224ENST00000488927 LY75O60449 1722 aa20.89■□□□□ 0.93
HDAC7-224ENST00000488927 SIPA1L3O60292 1781 aaPredicted RBP20.88■□□□□ 0.93
HDAC7-224ENST00000488927 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
HDAC7-224ENST00000488927 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
HDAC7-224ENST00000488927 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
HDAC7-224ENST00000488927 RREB1Q92766 1687 aa20.88■□□□□ 0.93
HDAC7-224ENST00000488927 PAPPAQ13219 1627 aa20.87■□□□□ 0.93
HDAC7-224ENST00000488927 PTCD1O75127 700 aaKnown RBP20.86■□□□□ 0.93
HDAC7-224ENST00000488927 ATP6V1AP38606 617 aa20.86■□□□□ 0.93
HDAC7-224ENST00000488927 VSIG10Q8N0Z9 540 aa20.86■□□□□ 0.93
HDAC7-224ENST00000488927 LRRC4BQ9NT99 713 aa20.86■□□□□ 0.93
HDAC7-224ENST00000488927 WWC1Q8IX03 1113 aa20.85■□□□□ 0.93
HDAC7-224ENST00000488927 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
HDAC7-224ENST00000488927 ZNF831Q5JPB2 1677 aa20.84■□□□□ 0.93
HDAC7-224ENST00000488927 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
HDAC7-224ENST00000488927 TSPYL4Q9UJ04 414 aa20.84■□□□□ 0.93
HDAC7-224ENST00000488927 TEX13AQ9BXU3 409 aaPredicted RBP20.83■□□□□ 0.93
HDAC7-224ENST00000488927 IFT57Q9NWB7 429 aa20.83■□□□□ 0.93
HDAC7-224ENST00000488927 NUP188Q5SRE5 1749 aa20.83■□□□□ 0.92
HDAC7-224ENST00000488927 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.92
HDAC7-224ENST00000488927 CHL1O00533 1208 aa20.82■□□□□ 0.92
HDAC7-224ENST00000488927 GNAI1P63096 354 aa20.82■□□□□ 0.92
HDAC7-224ENST00000488927 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
HDAC7-224ENST00000488927 ZNF496Q96IT1 587 aaPredicted RBP20.82■□□□□ 0.92
HDAC7-224ENST00000488927 STK32BQ9NY57 414 aa20.82■□□□□ 0.92
HDAC7-224ENST00000488927 IL16Q14005 1332 aa20.81■□□□□ 0.92
HDAC7-224ENST00000488927 KCNQ4P56696 695 aa20.81■□□□□ 0.92
HDAC7-224ENST00000488927 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
HDAC7-224ENST00000488927 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
HDAC7-224ENST00000488927 UBR2Q8IWV8 1755 aa20.81■□□□□ 0.92
HDAC7-224ENST00000488927 HEG1Q9ULI3 1381 aa20.81■□□□□ 0.92
HDAC7-224ENST00000488927 ITPK1Q13572 414 aa20.8■□□□□ 0.92
HDAC7-224ENST00000488927 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
HDAC7-224ENST00000488927 LAS1LQ9Y4W2 734 aaKnown RBP20.8■□□□□ 0.92
HDAC7-224ENST00000488927 CICQ96RK0 1608 aaPredicted RBP20.79■□□□□ 0.92
HDAC7-224ENST00000488927 KCNQ3O43525 872 aa20.79■□□□□ 0.92
HDAC7-224ENST00000488927 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
HDAC7-224ENST00000488927 SLC15A2Q16348 729 aa20.79■□□□□ 0.92
HDAC7-224ENST00000488927 SENP3-EIF4A1A0A087X0R7 540 aa20.78■□□□□ 0.92
HDAC7-224ENST00000488927 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
HDAC7-224ENST00000488927 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
HDAC7-224ENST00000488927 AKT1S1Q96B36 256 aa20.78■□□□□ 0.92
HDAC7-224ENST00000488927 KDM3BQ7LBC6 1761 aa20.77■□□□□ 0.92
HDAC7-224ENST00000488927 C5P01031 1676 aa20.77■□□□□ 0.92
HDAC7-224ENST00000488927 STARD3NLO95772 234 aa20.77■□□□□ 0.92
HDAC7-224ENST00000488927 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
HDAC7-224ENST00000488927 RC3H1Q5TC82 1133 aaKnown RBP20.77■□□□□ 0.92
HDAC7-224ENST00000488927 AK7Q96M32 723 aa20.77■□□□□ 0.92
HDAC7-224ENST00000488927 CNTNAP4Q9C0A0 1308 aa20.77■□□□□ 0.91
HDAC7-224ENST00000488927 DNAJC10Q8IXB1 793 aa20.76■□□□□ 0.91
HDAC7-224ENST00000488927 ANO8Q9HCE9 1232 aaPredicted RBP20.76■□□□□ 0.91
HDAC7-224ENST00000488927 MBIPQ9NS73 344 aa20.75■□□□□ 0.91
HDAC7-224ENST00000488927 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
HDAC7-224ENST00000488927 ZNF521Q96K83 1311 aa20.75■□□□□ 0.91
HDAC7-224ENST00000488927 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
HDAC7-224ENST00000488927 CYP19A1P11511 503 aaPredicted RBP20.74■□□□□ 0.91
HDAC7-224ENST00000488927 ZNF827Q17R98 1081 aa20.74■□□□□ 0.91
HDAC7-224ENST00000488927 FLAD1Q8NFF5 587 aa20.74■□□□□ 0.91
HDAC7-224ENST00000488927 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
HDAC7-224ENST00000488927 TJP1Q07157 1748 aa20.73■□□□□ 0.91
HDAC7-224ENST00000488927 GIGYF1O75420 1035 aaPredicted RBP20.73■□□□□ 0.91
HDAC7-224ENST00000488927 CRKLP46109 303 aaKnown RBP20.73■□□□□ 0.91
HDAC7-224ENST00000488927 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
HDAC7-224ENST00000488927 R3HDM1Q15032 1099 aaKnown RBP20.72■□□□□ 0.91
HDAC7-224ENST00000488927 CCDC87Q9NVE4 849 aa20.72■□□□□ 0.91
HDAC7-224ENST00000488927 COL5A3P25940 1745 aaPredicted RBP20.72■□□□□ 0.91
HDAC7-224ENST00000488927 GNPATO15228 680 aa20.71■□□□□ 0.91
HDAC7-224ENST00000488927 HOXB7P09629 217 aa20.71■□□□□ 0.91
HDAC7-224ENST00000488927 SSFA2P28290 1259 aa20.71■□□□□ 0.91
HDAC7-224ENST00000488927 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms