RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 UVSSAQ2YD98 709 aa19.38■□□□□ 0.69
MCF2L-229ENST00000488765 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
MCF2L-229ENST00000488765 ABCA9Q8IUA7 1624 aa19.37■□□□□ 0.69
MCF2L-229ENST00000488765 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
MCF2L-229ENST00000488765 TXNDC2Q86VQ3 553 aa19.36■□□□□ 0.69
MCF2L-229ENST00000488765 EIF2AK4Q9P2K8 1649 aaKnown RBP19.36■□□□□ 0.69
MCF2L-229ENST00000488765 LOC102724159A0A0B4J2E5 919 aa19.36■□□□□ 0.69
MCF2L-229ENST00000488765 PWP2Q15269 919 aaKnown RBP19.36■□□□□ 0.69
MCF2L-229ENST00000488765 RILPL2Q969X0 211 aa19.36■□□□□ 0.69
MCF2L-229ENST00000488765 MADDQ8WXG6 1647 aa19.36■□□□□ 0.69
MCF2L-229ENST00000488765 KIDINS220Q9ULH0 1771 aa19.36■□□□□ 0.69
MCF2L-229ENST00000488765 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
MCF2L-229ENST00000488765 SPHKAPQ2M3C7 1700 aa19.35■□□□□ 0.69
MCF2L-229ENST00000488765 ERVK-7P63135 1459 aa19.35■□□□□ 0.69
MCF2L-229ENST00000488765 SMTNL1A8MU46 457 aa19.35■□□□□ 0.69
MCF2L-229ENST00000488765 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
MCF2L-229ENST00000488765 ZCCHC17Q9NP64 241 aaKnown RBP19.35■□□□□ 0.69
MCF2L-229ENST00000488765 GOLGA6L6A8MZA4 724 aa19.35■□□□□ 0.69
MCF2L-229ENST00000488765 CEBPAP49715 358 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-229ENST00000488765 GORABQ5T7V8 394 aa19.35■□□□□ 0.69
MCF2L-229ENST00000488765 FAM173BQ6P4H8 233 aa19.35■□□□□ 0.69
MCF2L-229ENST00000488765 REC8O95072 547 aa19.34■□□□□ 0.69
MCF2L-229ENST00000488765 CEP135Q66GS9 1140 aa19.34■□□□□ 0.69
MCF2L-229ENST00000488765 ERC2O15083 957 aa19.33■□□□□ 0.69
MCF2L-229ENST00000488765 FBXW7Q969H0 707 aa19.33■□□□□ 0.69
MCF2L-229ENST00000488765 DNM1Q05193 864 aaKnown RBP19.33■□□□□ 0.68
MCF2L-229ENST00000488765 CDK19Q9BWU1 502 aa19.33■□□□□ 0.68
MCF2L-229ENST00000488765 SYNMO15061 1565 aa19.33■□□□□ 0.68
MCF2L-229ENST00000488765 LCMT1Q9UIC8 334 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 CEP152O94986 1710 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 TULP2O00295 520 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 CPA1P15085 419 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 ZNF446Q9NWS9 450 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 INO80Q9ULG1 1556 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-229ENST00000488765 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 EP400NLQ6ZTU2 488 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 FERMT3Q86UX7 667 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 LRRN4CLQ8ND94 238 aa19.32■□□□□ 0.68
MCF2L-229ENST00000488765 CACTINQ8WUQ7 758 aaKnown RBP19.32■□□□□ 0.68
MCF2L-229ENST00000488765 ERCC6LQ2NKX8 1250 aa19.31■□□□□ 0.68
MCF2L-229ENST00000488765 TET3O43151 1660 aa19.31■□□□□ 0.68
MCF2L-229ENST00000488765 SLC52A1Q9NWF4 448 aa19.31■□□□□ 0.68
MCF2L-229ENST00000488765 PPRC1Q5VV67 1664 aaKnown RBP19.31■□□□□ 0.68
MCF2L-229ENST00000488765 HMOX1P09601 288 aa19.3■□□□□ 0.68
MCF2L-229ENST00000488765 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
MCF2L-229ENST00000488765 A0A087WWV3 80 aa19.3■□□□□ 0.68
MCF2L-229ENST00000488765 FILIP1Q7Z7B0 1213 aa19.3■□□□□ 0.68
MCF2L-229ENST00000488765 ZNF397Q8NF99 534 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-229ENST00000488765 MAP4K4O95819 1239 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-229ENST00000488765 ZSCAN25Q6NSZ9 544 aa19.3■□□□□ 0.68
MCF2L-229ENST00000488765 SYT10Q6XYQ8 523 aa19.3■□□□□ 0.68
MCF2L-229ENST00000488765 CCDC144BQ3MJ40 725 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 CCDC144CPQ8IYA2 1237 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 ZRANB1Q9UGI0 708 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 ARHGAP31Q2M1Z3 1444 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 ST5P78524 1137 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 KRBA2Q6ZNG9 492 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 DHX37Q8IY37 1157 aaKnown RBP19.29■□□□□ 0.68
MCF2L-229ENST00000488765 GPATCH11Q8N954 259 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 TSPOAP1O95153 1857 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 TCHHQ07283 1943 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 EXOC6BQ9Y2D4 811 aa19.29■□□□□ 0.68
MCF2L-229ENST00000488765 EFCAB6Q5THR3 1501 aa19.28■□□□□ 0.68
MCF2L-229ENST00000488765 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
MCF2L-229ENST00000488765 VPS37CA5D8V6 355 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-229ENST00000488765 ANKRD65E5RJM6 399 aa19.28■□□□□ 0.68
MCF2L-229ENST00000488765 RNF17Q9BXT8 1623 aaKnown RBP19.28■□□□□ 0.68
MCF2L-229ENST00000488765 SKIDA1Q1XH10 827 aa19.27■□□□□ 0.68
MCF2L-229ENST00000488765 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
MCF2L-229ENST00000488765 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.67
MCF2L-229ENST00000488765 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.67
MCF2L-229ENST00000488765 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
MCF2L-229ENST00000488765 UBE2HP62256 183 aa19.26■□□□□ 0.67
MCF2L-229ENST00000488765 ANO6Q4KMQ2 910 aa19.26■□□□□ 0.67
MCF2L-229ENST00000488765 EPC1Q9H2F5 836 aa19.26■□□□□ 0.67
MCF2L-229ENST00000488765 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
MCF2L-229ENST00000488765 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 CCDC192P0DO97 292 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 SLC26A8Q96RN1 970 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-229ENST00000488765 SYT1P21579 422 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 CYP2C19P33261 490 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 PTPN14Q15678 1187 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
MCF2L-229ENST00000488765 DCTPP1Q9H773 170 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 MLH3Q9UHC1 1453 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 VAMP4O75379 141 aa19.25■□□□□ 0.67
MCF2L-229ENST00000488765 ABCA6Q8N139 1617 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 FYB1O15117 783 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-229ENST00000488765 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-229ENST00000488765 TEX2Q8IWB9 1127 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 NFATC2IPQ8NCF5 419 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 PLEKHF1Q96S99 279 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
MCF2L-229ENST00000488765 SEC31AO94979 1220 aaKnown RBP19.23■□□□□ 0.67
MCF2L-229ENST00000488765 LIG1P18858 919 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 GTF2A1P52655 376 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms