RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 PRKAR2BP31323 418 aa25.39■■□□□ 1.66
HDAC10-215ENST00000488270 U2AF1Q01081 240 aaKnown RBP eCLIP25.39■■□□□ 1.66
HDAC10-215ENST00000488270 RALBP1Q15311 655 aa25.38■■□□□ 1.65
HDAC10-215ENST00000488270 AMIGO3Q86WK7 504 aa25.38■■□□□ 1.65
HDAC10-215ENST00000488270 LINC00116Q8NCU8 138 aa25.38■■□□□ 1.65
HDAC10-215ENST00000488270 FCHSD2O94868 740 aa25.37■■□□□ 1.65
HDAC10-215ENST00000488270 COL23A1Q86Y22 540 aaPredicted RBP25.37■■□□□ 1.65
HDAC10-215ENST00000488270 SLC52A2Q9HAB3 445 aa25.37■■□□□ 1.65
HDAC10-215ENST00000488270 ATP6V1AP38606 617 aa25.36■■□□□ 1.65
HDAC10-215ENST00000488270 HMGB2P26583 209 aaKnown RBP25.35■■□□□ 1.65
HDAC10-215ENST00000488270 IL17REQ8NFR9 667 aa25.35■■□□□ 1.65
HDAC10-215ENST00000488270 SLC16A10Q8TF71 515 aa25.35■■□□□ 1.65
HDAC10-215ENST00000488270 SMIM5Q71RC9 77 aa25.34■■□□□ 1.65
HDAC10-215ENST00000488270 GAS2L2Q8NHY3 880 aa25.34■■□□□ 1.65
HDAC10-215ENST00000488270 RBM42Q9BTD8 480 aaKnown RBP25.33■■□□□ 1.65
HDAC10-215ENST00000488270 GNAT3A8MTJ3 354 aa25.32■■□□□ 1.64
HDAC10-215ENST00000488270 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
HDAC10-215ENST00000488270 MRC1P22897 1456 aa25.31■■□□□ 1.64
HDAC10-215ENST00000488270 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
HDAC10-215ENST00000488270 AK7Q96M32 723 aa25.3■■□□□ 1.64
HDAC10-215ENST00000488270 PPP1R1BQ9UD71 204 aaPredicted RBP25.3■■□□□ 1.64
HDAC10-215ENST00000488270 C5P01031 1676 aa25.29■■□□□ 1.64
HDAC10-215ENST00000488270 ADAMTS7Q9UKP4 1686 aa25.29■■□□□ 1.64
HDAC10-215ENST00000488270 SLC39A6Q13433 755 aa25.28■■□□□ 1.64
HDAC10-215ENST00000488270 FLAD1Q8NFF5 587 aa25.28■■□□□ 1.64
HDAC10-215ENST00000488270 PLEKHF1Q96S99 279 aa25.28■■□□□ 1.64
HDAC10-215ENST00000488270 C4BP0C0L5 1744 aa25.28■■□□□ 1.64
HDAC10-215ENST00000488270 QSER1Q2KHR3 1735 aa25.28■■□□□ 1.64
HDAC10-215ENST00000488270 SCN11AQ9UI33 1791 aa25.27■■□□□ 1.64
HDAC10-215ENST00000488270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.27■■□□□ 1.64
HDAC10-215ENST00000488270 RC3H1Q5TC82 1133 aaKnown RBP25.27■■□□□ 1.64
HDAC10-215ENST00000488270 TAF1LQ8IZX4 1826 aa25.27■■□□□ 1.64
HDAC10-215ENST00000488270 CEMIPQ8WUJ3 1361 aa25.27■■□□□ 1.64
HDAC10-215ENST00000488270 TUBGCP6Q96RT7 1819 aa25.26■■□□□ 1.63
HDAC10-215ENST00000488270 MYBBP1AQ9BQG0 1328 aaKnown RBP25.26■■□□□ 1.63
HDAC10-215ENST00000488270 SSFA2P28290 1259 aa25.25■■□□□ 1.63
HDAC10-215ENST00000488270 ARXQ96QS3 562 aa25.25■■□□□ 1.63
HDAC10-215ENST00000488270 PRKRIP1Q9H875 184 aaPredicted RBP25.25■■□□□ 1.63
HDAC10-215ENST00000488270 GNPATO15228 680 aa25.24■■□□□ 1.63
HDAC10-215ENST00000488270 MSH5O43196 834 aa25.24■■□□□ 1.63
HDAC10-215ENST00000488270 CNTNAP4Q9C0A0 1308 aa25.23■■□□□ 1.63
HDAC10-215ENST00000488270 PHF14O94880 888 aa25.23■■□□□ 1.63
HDAC10-215ENST00000488270 ZNF831Q5JPB2 1677 aa25.23■■□□□ 1.63
HDAC10-215ENST00000488270 FHDC1Q9C0D6 1143 aaPredicted RBP25.22■■□□□ 1.63
HDAC10-215ENST00000488270 ZNF316A6NFI3 1004 aaPredicted RBP25.21■■□□□ 1.63
HDAC10-215ENST00000488270 MSL1Q68DK7 614 aa25.21■■□□□ 1.63
HDAC10-215ENST00000488270 TEFQ10587 303 aa25.2■■□□□ 1.62
HDAC10-215ENST00000488270 INTS5Q6P9B9 1019 aaKnown RBP25.2■■□□□ 1.62
HDAC10-215ENST00000488270 DNAJC10Q8IXB1 793 aa25.2■■□□□ 1.62
HDAC10-215ENST00000488270 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
HDAC10-215ENST00000488270 KCPQ6ZWJ8 1503 aa25.19■■□□□ 1.62
HDAC10-215ENST00000488270 HTATSF1O43719 755 aaKnown RBP25.19■■□□□ 1.62
HDAC10-215ENST00000488270 RPS6KA4O75676 772 aa25.19■■□□□ 1.62
HDAC10-215ENST00000488270 CRKLP46109 303 aaKnown RBP25.19■■□□□ 1.62
HDAC10-215ENST00000488270 MCM10Q7L590 875 aa25.19■■□□□ 1.62
HDAC10-215ENST00000488270 DCTN1Q14203 1278 aa25.18■■□□□ 1.62
HDAC10-215ENST00000488270 ZNF790Q6PG37 636 aa25.18■■□□□ 1.62
HDAC10-215ENST00000488270 RTCBQ9Y3I0 505 aaKnown RBP25.18■■□□□ 1.62
HDAC10-215ENST00000488270 COL24A1Q17RW2 1714 aa25.17■■□□□ 1.62
HDAC10-215ENST00000488270 CYP19A1P11511 503 aaPredicted RBP25.17■■□□□ 1.62
HDAC10-215ENST00000488270 POLD1P28340 1107 aa25.17■■□□□ 1.62
HDAC10-215ENST00000488270 VSIG10Q8N0Z9 540 aa25.17■■□□□ 1.62
HDAC10-215ENST00000488270 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
HDAC10-215ENST00000488270 ZNF496Q96IT1 587 aaPredicted RBP25.17■■□□□ 1.62
HDAC10-215ENST00000488270 UBR3Q6ZT12 1888 aa25.17■■□□□ 1.62
HDAC10-215ENST00000488270 KCNQ3O43525 872 aa25.16■■□□□ 1.62
HDAC10-215ENST00000488270 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
HDAC10-215ENST00000488270 RTF1Q92541 710 aaKnown RBP25.15■■□□□ 1.62
HDAC10-215ENST00000488270 ADRA2BP18089 450 aa25.14■■□□□ 1.62
HDAC10-215ENST00000488270 NFE2L2Q16236 605 aa25.14■■□□□ 1.62
HDAC10-215ENST00000488270 PNNQ9H307 717 aaKnown RBP25.13■■□□□ 1.61
HDAC10-215ENST00000488270 COL5A3P25940 1745 aaPredicted RBP25.12■■□□□ 1.61
HDAC10-215ENST00000488270 BTBD11A6QL63 1104 aa25.12■■□□□ 1.61
HDAC10-215ENST00000488270 TTC5Q8N0Z6 440 aa25.12■■□□□ 1.61
HDAC10-215ENST00000488270 CICQ96RK0 1608 aaPredicted RBP25.12■■□□□ 1.61
HDAC10-215ENST00000488270 CCDC87Q9NVE4 849 aa25.11■■□□□ 1.61
HDAC10-215ENST00000488270 TJP1Q07157 1748 aa25.11■■□□□ 1.61
HDAC10-215ENST00000488270 MYH14Q7Z406 1995 aaKnown RBP25.11■■□□□ 1.61
HDAC10-215ENST00000488270 HEG1Q9ULI3 1381 aa25.09■■□□□ 1.61
HDAC10-215ENST00000488270 NEFMP07197 916 aa25.09■■□□□ 1.61
HDAC10-215ENST00000488270 GYS1P13807 737 aa25.09■■□□□ 1.61
HDAC10-215ENST00000488270 ADAMTS8Q9UP79 889 aa25.09■■□□□ 1.61
HDAC10-215ENST00000488270 TAF7Q15545 349 aaPredicted RBP25.08■■□□□ 1.61
HDAC10-215ENST00000488270 SOS1Q07889 1333 aaPredicted RBP25.08■■□□□ 1.6
HDAC10-215ENST00000488270 SIPA1L3O60292 1781 aaPredicted RBP25.08■■□□□ 1.6
HDAC10-215ENST00000488270 UTRNP46939 3433 aa25.08■■□□□ 1.6
HDAC10-215ENST00000488270 RFC4P35249 363 aa25.07■■□□□ 1.6
HDAC10-215ENST00000488270 FMNL2Q96PY5 1086 aa25.07■■□□□ 1.6
HDAC10-215ENST00000488270 THUMPD2Q9BTF0 503 aaKnown RBP25.07■■□□□ 1.6
HDAC10-215ENST00000488270 ZBTB1Q9Y2K1 713 aa25.07■■□□□ 1.6
HDAC10-215ENST00000488270 MAPK8IP3Q9UPT6 1336 aa25.07■■□□□ 1.6
HDAC10-215ENST00000488270 VIRMAQ69YN4 1812 aaKnown RBP25.07■■□□□ 1.6
HDAC10-215ENST00000488270 UBR2Q8IWV8 1755 aa25.06■■□□□ 1.6
HDAC10-215ENST00000488270 NLGN2Q8NFZ4 835 aa25.06■■□□□ 1.6
HDAC10-215ENST00000488270 MIS18AQ9NYP9 233 aa25.06■■□□□ 1.6
HDAC10-215ENST00000488270 SRP68Q9UHB9 627 aaKnown RBP25.06■■□□□ 1.6
HDAC10-215ENST00000488270 STARD3NLO95772 234 aa25.05■■□□□ 1.6
HDAC10-215ENST00000488270 TMPOP42166 694 aaKnown RBP25.05■■□□□ 1.6
HDAC10-215ENST00000488270 NLGN1Q8N2Q7 840 aa25.05■■□□□ 1.6
HDAC10-215ENST00000488270 TEX13AQ9BXU3 409 aaPredicted RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms