RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 KAT6BQ8WYB5 2073 aa8.89□□□□□ -0.99
PDAP1-203ENST00000488214 CYP27B1O15528 508 aa8.89□□□□□ -0.99
PDAP1-203ENST00000488214 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
PDAP1-203ENST00000488214 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
PDAP1-203ENST00000488214 C20orf194Q5TEA3 1177 aa8.89□□□□□ -0.99
PDAP1-203ENST00000488214 SSH1Q8WYL5 1049 aa8.89□□□□□ -0.99
PDAP1-203ENST00000488214 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
PDAP1-203ENST00000488214 SPATA31A1Q5TZJ5 1347 aa8.88□□□□□ -0.99
PDAP1-203ENST00000488214 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
PDAP1-203ENST00000488214 NGLY1Q96IV0 654 aa8.88□□□□□ -0.99
PDAP1-203ENST00000488214 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
PDAP1-203ENST00000488214 CRBNQ96SW2 442 aa8.88□□□□□ -0.99
PDAP1-203ENST00000488214 BCL9LQ86UU0 1499 aa8.88□□□□□ -0.99
PDAP1-203ENST00000488214 SPATA31A5Q5VU36 1347 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 SPATA31A7Q8IWB4 1347 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 BTBD11A6QL63 1104 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
PDAP1-203ENST00000488214 VAMP4O75379 141 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 ALDH1L2Q3SY69 923 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 ZKSCAN2Q63HK3 967 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 EXOC6Q8TAG9 804 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 DDX54Q8TDD1 881 aaKnown RBP8.87□□□□□ -0.99
PDAP1-203ENST00000488214 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 SLC52A2Q9HAB3 445 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 BABAM1Q9NWV8 329 aa8.87□□□□□ -0.99
PDAP1-203ENST00000488214 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
PDAP1-203ENST00000488214 UNC5CLQ8IV45 518 aa8.86□□□□□ -0.99
PDAP1-203ENST00000488214 FTSJ3Q8IY81 847 aaKnown RBP8.86□□□□□ -0.99
PDAP1-203ENST00000488214 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
PDAP1-203ENST00000488214 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
PDAP1-203ENST00000488214 TNNQ9UQP3 1299 aa8.86□□□□□ -0.99
PDAP1-203ENST00000488214 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
PDAP1-203ENST00000488214 KCNQ3O43525 872 aa8.85□□□□□ -0.99
PDAP1-203ENST00000488214 CABP4P57796 275 aa8.85□□□□□ -0.99
PDAP1-203ENST00000488214 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
PDAP1-203ENST00000488214 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
PDAP1-203ENST00000488214 CLUAP1Q96AJ1 413 aa8.85□□□□□ -0.99
PDAP1-203ENST00000488214 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
PDAP1-203ENST00000488214 THRAP3Q9Y2W1 955 aaKnown RBP8.85□□□□□ -0.99
PDAP1-203ENST00000488214 TJP1Q07157 1748 aa8.85□□□□□ -0.99
PDAP1-203ENST00000488214 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 AFF2P51816 1311 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 A0A0G2JS52 829 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 RGS12O14924 1447 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 ATRNO75882 1429 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 TRIM27P14373 513 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 EIF4A1P60842 406 aaKnown RBP8.84□□□□□ -0.99
PDAP1-203ENST00000488214 MYT1Q01538 1121 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 PDE3AQ14432 1141 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 VPS72Q15906 364 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 TTC5Q8N0Z6 440 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 USP21Q9UK80 565 aa8.84□□□□□ -0.99
PDAP1-203ENST00000488214 NOB1Q9ULX3 412 aaKnown RBP8.84□□□□□ -0.99
PDAP1-203ENST00000488214 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -0.99
PDAP1-203ENST00000488214 ARFGEF2Q9Y6D5 1785 aa8.84□□□□□ -1
PDAP1-203ENST00000488214 SOS1Q07889 1333 aaPredicted RBP8.83□□□□□ -1
PDAP1-203ENST00000488214 BTAF1O14981 1849 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 SBF2Q86WG5 1849 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 IPO8O15397 1037 aaKnown RBP8.83□□□□□ -1
PDAP1-203ENST00000488214 MS4A1P11836 297 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 RLBP1P12271 317 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 SLC39A6Q13433 755 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 NKX1-1Q15270 411 aaPredicted RBP8.83□□□□□ -1
PDAP1-203ENST00000488214 DDB1Q16531 1140 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 DZIP1LQ8IYY4 767 aaKnown RBP8.83□□□□□ -1
PDAP1-203ENST00000488214 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
PDAP1-203ENST00000488214 NFATC2IPQ8NCF5 419 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 STK31Q9BXU1 1019 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 COG6Q9Y2V7 657 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 NUP188Q5SRE5 1749 aa8.83□□□□□ -1
PDAP1-203ENST00000488214 ERVV-2B6SEH9 535 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 EXOC5O00471 708 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 HOXB7P09629 217 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
PDAP1-203ENST00000488214 FAM98CQ17RN3 349 aaKnown RBP8.82□□□□□ -1
PDAP1-203ENST00000488214 CCDC30Q5VVM6 783 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 ZNF790Q6PG37 636 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 BARGINQ6ZT62 677 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 ITPRIPQ8IWB1 547 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 TMOD3Q9NYL9 352 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 CICQ96RK0 1608 aaPredicted RBP8.82□□□□□ -1
PDAP1-203ENST00000488214 PXDNLA1KZ92 1463 aa8.82□□□□□ -1
PDAP1-203ENST00000488214 ABCC4O15439 1325 aa8.81□□□□□ -1
PDAP1-203ENST00000488214 COL5A3P25940 1745 aaPredicted RBP8.81□□□□□ -1
PDAP1-203ENST00000488214 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
PDAP1-203ENST00000488214 MVPQ14764 893 aaKnown RBP8.81□□□□□ -1
PDAP1-203ENST00000488214 API5Q9BZZ5 524 aaKnown RBP8.81□□□□□ -1
PDAP1-203ENST00000488214 HEG1Q9ULI3 1381 aa8.81□□□□□ -1
PDAP1-203ENST00000488214 PTPRCP08575 1304 aa8.8□□□□□ -1
PDAP1-203ENST00000488214 BCL9O00512 1426 aa8.8□□□□□ -1
PDAP1-203ENST00000488214 PRAMEF22A3QJZ6 481 aa8.8□□□□□ -1
PDAP1-203ENST00000488214 SLC4A2P04920 1241 aa8.8□□□□□ -1
PDAP1-203ENST00000488214 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
PDAP1-203ENST00000488214 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
PDAP1-203ENST00000488214 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
PDAP1-203ENST00000488214 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms