RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ITPK1Q13572 414 aa26.28■■□□□ 1.8
CD55-209ENST00000488171 MSL1Q68DK7 614 aa26.28■■□□□ 1.8
CD55-209ENST00000488171 SMIM5Q71RC9 77 aa26.26■■□□□ 1.79
CD55-209ENST00000488171 KLHL34Q8N239 644 aa26.26■■□□□ 1.79
CD55-209ENST00000488171 ATP6V1AP38606 617 aa26.25■■□□□ 1.79
CD55-209ENST00000488171 NPC1L1Q9UHC9 1359 aa26.25■■□□□ 1.79
CD55-209ENST00000488171 ZNF831Q5JPB2 1677 aa26.24■■□□□ 1.79
CD55-209ENST00000488171 PHF14O94880 888 aa26.23■■□□□ 1.79
CD55-209ENST00000488171 C1orf141Q5JVX7 400 aa26.23■■□□□ 1.79
CD55-209ENST00000488171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.22■■□□□ 1.79
CD55-209ENST00000488171 CABP4P57796 275 aa26.22■■□□□ 1.79
CD55-209ENST00000488171 NLGN2Q8NFZ4 835 aa26.22■■□□□ 1.79
CD55-209ENST00000488171 SLC4A9Q96Q91 983 aa26.22■■□□□ 1.79
CD55-209ENST00000488171 SSFA2P28290 1259 aa26.21■■□□□ 1.79
CD55-209ENST00000488171 UTRNP46939 3433 aa26.19■■□□□ 1.78
CD55-209ENST00000488171 SCN11AQ9UI33 1791 aa26.19■■□□□ 1.78
CD55-209ENST00000488171 GNPATO15228 680 aa26.19■■□□□ 1.78
CD55-209ENST00000488171 HMOX1P09601 288 aa26.19■■□□□ 1.78
CD55-209ENST00000488171 COL5A3P25940 1745 aaPredicted RBP26.18■■□□□ 1.78
CD55-209ENST00000488171 COL3A1P02461 1466 aaPredicted RBP26.18■■□□□ 1.78
CD55-209ENST00000488171 DIAPH1O60610 1272 aaKnown RBP26.18■■□□□ 1.78
CD55-209ENST00000488171 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
CD55-209ENST00000488171 RBM42Q9BTD8 480 aaKnown RBP26.18■■□□□ 1.78
CD55-209ENST00000488171 NFATC2IPQ8NCF5 419 aa26.17■■□□□ 1.78
CD55-209ENST00000488171 GPR162Q16538 588 aa26.16■■□□□ 1.78
CD55-209ENST00000488171 AKAP4Q5JQC9 854 aa26.16■■□□□ 1.78
CD55-209ENST00000488171 CHD4Q14839 1912 aa26.14■■□□□ 1.77
CD55-209ENST00000488171 RC3H1Q5TC82 1133 aaKnown RBP26.12■■□□□ 1.77
CD55-209ENST00000488171 CD2APQ9Y5K6 639 aa26.12■■□□□ 1.77
CD55-209ENST00000488171 CNTNAP4Q9C0A0 1308 aa26.12■■□□□ 1.77
CD55-209ENST00000488171 PTCD1O75127 700 aaKnown RBP26.11■■□□□ 1.77
CD55-209ENST00000488171 LGR6Q9HBX8 967 aa26.11■■□□□ 1.77
CD55-209ENST00000488171 VIRMAQ69YN4 1812 aaKnown RBP26.11■■□□□ 1.77
CD55-209ENST00000488171 MRC1P22897 1456 aa26.11■■□□□ 1.77
CD55-209ENST00000488171 CICQ96RK0 1608 aaPredicted RBP26.1■■□□□ 1.77
CD55-209ENST00000488171 MTHFSDQ2M296 383 aaKnown RBP26.1■■□□□ 1.77
CD55-209ENST00000488171 PELP1Q8IZL8 1130 aaKnown RBP26.1■■□□□ 1.77
CD55-209ENST00000488171 RTCBQ9Y3I0 505 aaKnown RBP26.1■■□□□ 1.77
CD55-209ENST00000488171 ADAMTS7Q9UKP4 1686 aa26.1■■□□□ 1.77
CD55-209ENST00000488171 TJP1Q07157 1748 aa26.1■■□□□ 1.77
CD55-209ENST00000488171 SLC52A2Q9HAB3 445 aa26.09■■□□□ 1.77
CD55-209ENST00000488171 MYH14Q7Z406 1995 aaKnown RBP26.09■■□□□ 1.77
CD55-209ENST00000488171 RNMTO43148 476 aaKnown RBP26.08■■□□□ 1.77
CD55-209ENST00000488171 GOLGB1Q14789 3259 aaKnown RBP26.08■■□□□ 1.77
CD55-209ENST00000488171 YBX3P16989 372 aaKnown RBP eCLIP26.07■■□□□ 1.761e-8■■□□□ 12.4
CD55-209ENST00000488171 TRAPPC3LQ5T215 181 aa26.07■■□□□ 1.76
CD55-209ENST00000488171 U2SURPO15042 1029 aaKnown RBP26.06■■□□□ 1.76
CD55-209ENST00000488171 RPS6KA4O75676 772 aa26.06■■□□□ 1.76
CD55-209ENST00000488171 ADRA2BP18089 450 aa26.06■■□□□ 1.76
CD55-209ENST00000488171 ZNF784Q8NCA9 323 aaPredicted RBP26.06■■□□□ 1.76
CD55-209ENST00000488171 ARHGEF1Q92888 912 aaKnown RBP26.06■■□□□ 1.76
CD55-209ENST00000488171 C4AP0C0L4 1744 aa26.04■■□□□ 1.76
CD55-209ENST00000488171 CRKLP46109 303 aaKnown RBP26.04■■□□□ 1.76
CD55-209ENST00000488171 MMP10P09238 476 aa26.02■■□□□ 1.76
CD55-209ENST00000488171 SLC39A6Q13433 755 aa26.01■■□□□ 1.75
CD55-209ENST00000488171 KCPQ6ZWJ8 1503 aa26.01■■□□□ 1.75
CD55-209ENST00000488171 GRIN3BO60391 1043 aa26■■□□□ 1.75
CD55-209ENST00000488171 GYS1P13807 737 aa26■■□□□ 1.75
CD55-209ENST00000488171 RFC4P35249 363 aa25.99■■□□□ 1.75
CD55-209ENST00000488171 NLGN1Q8N2Q7 840 aa25.99■■□□□ 1.75
CD55-209ENST00000488171 PPP2R1AP30153 589 aa25.98■■□□□ 1.75
CD55-209ENST00000488171 INTS5Q6P9B9 1019 aaKnown RBP25.98■■□□□ 1.75
CD55-209ENST00000488171 DNAJC10Q8IXB1 793 aa25.98■■□□□ 1.75
CD55-209ENST00000488171 CFAP53Q96M91 514 aa25.98■■□□□ 1.75
CD55-209ENST00000488171 KIF13BQ9NQT8 1826 aa25.97■■□□□ 1.75
CD55-209ENST00000488171 UBR2Q8IWV8 1755 aa25.97■■□□□ 1.75
CD55-209ENST00000488171 GAS2L2Q8NHY3 880 aa25.96■■□□□ 1.75
CD55-209ENST00000488171 RSPH6AQ9H0K4 717 aa25.95■■□□□ 1.75
CD55-209ENST00000488171 KIAA1551Q9HCM1 1747 aa25.95■■□□□ 1.74
CD55-209ENST00000488171 GNAT3A8MTJ3 354 aa25.95■■□□□ 1.74
CD55-209ENST00000488171 IL17REQ8NFR9 667 aa25.95■■□□□ 1.74
CD55-209ENST00000488171 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.74
CD55-209ENST00000488171 SIPA1L3O60292 1781 aaPredicted RBP25.94■■□□□ 1.74
CD55-209ENST00000488171 CYP19A1P11511 503 aaPredicted RBP25.94■■□□□ 1.74
CD55-209ENST00000488171 PRKAR2BP31323 418 aa25.94■■□□□ 1.74
CD55-209ENST00000488171 PHACTR3Q96KR7 559 aa25.94■■□□□ 1.74
CD55-209ENST00000488171 CCDC87Q9NVE4 849 aa25.94■■□□□ 1.74
CD55-209ENST00000488171 USP42Q9H9J4 1324 aaKnown RBP25.93■■□□□ 1.74
CD55-209ENST00000488171 C10orf71Q711Q0 1435 aa25.93■■□□□ 1.74
CD55-209ENST00000488171 WWC3Q9ULE0 1092 aa25.92■■□□□ 1.74
CD55-209ENST00000488171 NUDCQ9Y266 331 aa25.92■■□□□ 1.74
CD55-209ENST00000488171 PXDNLA1KZ92 1463 aa25.91■■□□□ 1.74
CD55-209ENST00000488171 SOS1Q07889 1333 aaPredicted RBP25.91■■□□□ 1.74
CD55-209ENST00000488171 VSIG10Q8N0Z9 540 aa25.91■■□□□ 1.74
CD55-209ENST00000488171 FKBP8Q14318 412 aa25.9■■□□□ 1.74
CD55-209ENST00000488171 N4BP2Q86UW6 1770 aaPredicted RBP25.89■■□□□ 1.74
CD55-209ENST00000488171 CEMIPQ8WUJ3 1361 aa25.89■■□□□ 1.74
CD55-209ENST00000488171 TEFQ10587 303 aa25.89■■□□□ 1.74
CD55-209ENST00000488171 PARP3Q9Y6F1 533 aa25.89■■□□□ 1.74
CD55-209ENST00000488171 U2AF1L5P0DN76 240 aaPredicted RBP25.88■■□□□ 1.73
CD55-209ENST00000488171 U2AF1Q01081 240 aaKnown RBP eCLIP25.88■■□□□ 1.73
CD55-209ENST00000488171 TGFB2P61812 414 aa25.87■■□□□ 1.73
CD55-209ENST00000488171 TTC5Q8N0Z6 440 aa25.87■■□□□ 1.73
CD55-209ENST00000488171 ZBTB1Q9Y2K1 713 aa25.87■■□□□ 1.73
CD55-209ENST00000488171 ZNF790Q6PG37 636 aa25.86■■□□□ 1.73
CD55-209ENST00000488171 FCHSD2O94868 740 aa25.85■■□□□ 1.73
CD55-209ENST00000488171 DDR1Q08345 913 aa25.85■■□□□ 1.73
CD55-209ENST00000488171 ZNF496Q96IT1 587 aaPredicted RBP25.85■■□□□ 1.73
CD55-209ENST00000488171 COL15A1P39059 1388 aa25.85■■□□□ 1.73
CD55-209ENST00000488171 A0A0G2JLW4 131 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms