RNA–Protein interactions for RNA: ENST00000488156.1

ARF4-205, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-205ENST00000488156 MAP3K5Q99683 1374 aa9.52□□□□□ -0.88
ARF4-205ENST00000488156 EXOC5O00471 708 aa9.52□□□□□ -0.89
ARF4-205ENST00000488156 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
ARF4-205ENST00000488156 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
ARF4-205ENST00000488156 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.89
ARF4-205ENST00000488156 RIMBP2O15034 1052 aa9.51□□□□□ -0.89
ARF4-205ENST00000488156 PPP1R15BQ5SWA1 713 aa9.51□□□□□ -0.89
ARF4-205ENST00000488156 ARXQ96QS3 562 aa9.51□□□□□ -0.89
ARF4-205ENST00000488156 CRYBG1Q9Y4K1 1723 aa9.51□□□□□ -0.89
ARF4-205ENST00000488156 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
ARF4-205ENST00000488156 MFSD10Q14728 455 aa9.5□□□□□ -0.89
ARF4-205ENST00000488156 HDGFL2Q7Z4V5 671 aaPredicted RBP9.5□□□□□ -0.89
ARF4-205ENST00000488156 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.5□□□□□ -0.89
ARF4-205ENST00000488156 MARCH10Q8NA82 808 aaPredicted RBP9.5□□□□□ -0.89
ARF4-205ENST00000488156 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
ARF4-205ENST00000488156 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
ARF4-205ENST00000488156 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
ARF4-205ENST00000488156 OVOS2A0A0G2JMS6 1433 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 OVOS2A0A0J9YW53 1432 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 CPSF1Q10570 1443 aaKnown RBP9.49□□□□□ -0.89
ARF4-205ENST00000488156 OVOS2Q6IE36 1432 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 TOPAZ1Q8N9V7 1692 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 DSG2Q14126 1118 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 PLPP6Q8IY26 295 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
ARF4-205ENST00000488156 MTFR1LQ9H019 292 aa9.49□□□□□ -0.89
ARF4-205ENST00000488156 SLIT3O75094 1523 aa9.48□□□□□ -0.89
ARF4-205ENST00000488156 ZNF710Q8N1W2 664 aa9.48□□□□□ -0.89
ARF4-205ENST00000488156 ZNF526Q8TF50 670 aaPredicted RBP9.48□□□□□ -0.89
ARF4-205ENST00000488156 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
ARF4-205ENST00000488156 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
ARF4-205ENST00000488156 LMO7Q8WWI1 1683 aa9.48□□□□□ -0.89
ARF4-205ENST00000488156 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
ARF4-205ENST00000488156 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
ARF4-205ENST00000488156 CCDC7Q96M83 1385 aa9.47□□□□□ -0.89
ARF4-205ENST00000488156 SBNO2Q9Y2G9 1366 aa9.47□□□□□ -0.89
ARF4-205ENST00000488156 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
ARF4-205ENST00000488156 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
ARF4-205ENST00000488156 BCL9O00512 1426 aa9.47□□□□□ -0.89
ARF4-205ENST00000488156 PTF1AQ7RTS3 328 aa9.46□□□□□ -0.9
ARF4-205ENST00000488156 NME9Q86XW9 330 aa9.46□□□□□ -0.9
ARF4-205ENST00000488156 JMYQ8N9B5 988 aa9.46□□□□□ -0.9
ARF4-205ENST00000488156 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.9
ARF4-205ENST00000488156 IL2RBP14784 551 aa9.45□□□□□ -0.9
ARF4-205ENST00000488156 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
ARF4-205ENST00000488156 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
ARF4-205ENST00000488156 TONSLQ96HA7 1378 aa9.45□□□□□ -0.9
ARF4-205ENST00000488156 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
ARF4-205ENST00000488156 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
ARF4-205ENST00000488156 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
ARF4-205ENST00000488156 STK32BQ9NY57 414 aa9.44□□□□□ -0.9
ARF4-205ENST00000488156 ERBB3P21860 1342 aa9.44□□□□□ -0.9
ARF4-205ENST00000488156 QRICH2Q9H0J4 1663 aa9.44□□□□□ -0.9
ARF4-205ENST00000488156 TBC1D12O60347 775 aa9.43□□□□□ -0.9
ARF4-205ENST00000488156 YBX3P16989 372 aaKnown RBP eCLIP9.43□□□□□ -0.94e-13■□□□□ 8.3
ARF4-205ENST00000488156 SLC15A2Q16348 729 aa9.43□□□□□ -0.9
ARF4-205ENST00000488156 IP6K1Q92551 441 aa9.43□□□□□ -0.9
ARF4-205ENST00000488156 WDR90Q96KV7 1748 aa9.42□□□□□ -0.9
ARF4-205ENST00000488156 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
ARF4-205ENST00000488156 ADCY9O60503 1353 aa9.42□□□□□ -0.9
ARF4-205ENST00000488156 ST20-MTHFSA0A0A6YYL1 179 aa9.42□□□□□ -0.9
ARF4-205ENST00000488156 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
ARF4-205ENST00000488156 COG3Q96JB2 828 aa9.42□□□□□ -0.9
ARF4-205ENST00000488156 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
ARF4-205ENST00000488156 ZNF316A6NFI3 1004 aaPredicted RBP9.41□□□□□ -0.9
ARF4-205ENST00000488156 E2F4Q16254 413 aa9.41□□□□□ -0.9
ARF4-205ENST00000488156 NLGN2Q8NFZ4 835 aa9.41□□□□□ -0.9
ARF4-205ENST00000488156 TESK2Q96S53 571 aa9.41□□□□□ -0.9
ARF4-205ENST00000488156 PARP4Q9UKK3 1724 aaKnown RBP9.41□□□□□ -0.9
ARF4-205ENST00000488156 PIK3C2AO00443 1686 aa9.41□□□□□ -0.9
ARF4-205ENST00000488156 TNS2Q63HR2 1409 aa9.4□□□□□ -0.9
ARF4-205ENST00000488156 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
ARF4-205ENST00000488156 AMPHP49418 695 aa9.4□□□□□ -0.9
ARF4-205ENST00000488156 HTRA3P83110 453 aa9.4□□□□□ -0.9
ARF4-205ENST00000488156 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
ARF4-205ENST00000488156 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.91
ARF4-205ENST00000488156 COL18A1P39060 1754 aa9.4□□□□□ -0.91
ARF4-205ENST00000488156 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
ARF4-205ENST00000488156 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
ARF4-205ENST00000488156 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
ARF4-205ENST00000488156 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
ARF4-205ENST00000488156 NFAT5O94916 1531 aa9.39□□□□□ -0.91
ARF4-205ENST00000488156 ABCC6O95255 1503 aa9.39□□□□□ -0.91
ARF4-205ENST00000488156 HOXC9P31274 260 aa9.38□□□□□ -0.91
ARF4-205ENST00000488156 TMF1P82094 1093 aa9.38□□□□□ -0.91
ARF4-205ENST00000488156 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
ARF4-205ENST00000488156 SLC27A3Q5K4L6 730 aa9.38□□□□□ -0.91
ARF4-205ENST00000488156 PEAK1Q9H792 1746 aa9.38□□□□□ -0.91
ARF4-205ENST00000488156 MAP3K19Q56UN5 1328 aa9.37□□□□□ -0.91
ARF4-205ENST00000488156 TOMM70O94826 608 aa9.37□□□□□ -0.91
ARF4-205ENST00000488156 FBLN1P23142 703 aa9.37□□□□□ -0.91
ARF4-205ENST00000488156 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
ARF4-205ENST00000488156 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
ARF4-205ENST00000488156 ZCRB1Q8TBF4 217 aaKnown RBP9.37□□□□□ -0.91
ARF4-205ENST00000488156 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
ARF4-205ENST00000488156 SBF2Q86WG5 1849 aa9.37□□□□□ -0.91
ARF4-205ENST00000488156 LRRC37A3O60309 1634 aa9.37□□□□□ -0.91
ARF4-205ENST00000488156 FYB1O15117 783 aa9.36□□□□□ -0.91
ARF4-205ENST00000488156 HSPA1AP0DMV8 641 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms