RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 KCNQ3O43525 872 aa18.7■□□□□ 0.58
GCA-210ENST00000487445 PLIN1O60240 522 aa18.7■□□□□ 0.58
GCA-210ENST00000487445 VAMP4O75379 141 aa18.7■□□□□ 0.58
GCA-210ENST00000487445 RRP1P56182 461 aaKnown RBP18.7■□□□□ 0.58
GCA-210ENST00000487445 PKD1L3Q7Z443 1732 aa18.68■□□□□ 0.58
GCA-210ENST00000487445 SLC39A6Q13433 755 aa18.68■□□□□ 0.58
GCA-210ENST00000487445 FKBP8Q14318 412 aa18.68■□□□□ 0.58
GCA-210ENST00000487445 ERVV-2B6SEH9 535 aa18.67■□□□□ 0.58
GCA-210ENST00000487445 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
GCA-210ENST00000487445 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
GCA-210ENST00000487445 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
GCA-210ENST00000487445 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
GCA-210ENST00000487445 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
GCA-210ENST00000487445 MARCH10Q8NA82 808 aaPredicted RBP18.66■□□□□ 0.58
GCA-210ENST00000487445 FRAT1Q92837 279 aaPredicted RBP18.66■□□□□ 0.58
GCA-210ENST00000487445 LRRC37A3O60309 1634 aa18.65■□□□□ 0.58
GCA-210ENST00000487445 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
GCA-210ENST00000487445 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
GCA-210ENST00000487445 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.65■□□□□ 0.58
GCA-210ENST00000487445 SYTL4Q96C24 671 aaPredicted RBP18.65■□□□□ 0.58
GCA-210ENST00000487445 ATRNO75882 1429 aa18.65■□□□□ 0.58
GCA-210ENST00000487445 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
GCA-210ENST00000487445 TTC5Q8N0Z6 440 aa18.65■□□□□ 0.58
GCA-210ENST00000487445 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
GCA-210ENST00000487445 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
GCA-210ENST00000487445 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
GCA-210ENST00000487445 ALDH1L2Q3SY69 923 aa18.63■□□□□ 0.57
GCA-210ENST00000487445 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
GCA-210ENST00000487445 ACSBG1Q96GR2 724 aa18.62■□□□□ 0.57
GCA-210ENST00000487445 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
GCA-210ENST00000487445 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
GCA-210ENST00000487445 EIF2S2P20042 333 aaKnown RBP18.6■□□□□ 0.57
GCA-210ENST00000487445 PIGBQ92521 554 aa18.6■□□□□ 0.57
GCA-210ENST00000487445 ZNF496Q96IT1 587 aaPredicted RBP18.6■□□□□ 0.57
GCA-210ENST00000487445 ADAMTS7Q9UKP4 1686 aa18.59■□□□□ 0.57
GCA-210ENST00000487445 ONECUT3O60422 494 aaPredicted RBP18.59■□□□□ 0.57
GCA-210ENST00000487445 FAM182BQ5T319 152 aa18.59■□□□□ 0.57
GCA-210ENST00000487445 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
GCA-210ENST00000487445 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
GCA-210ENST00000487445 MRC1P22897 1456 aa18.59■□□□□ 0.57
GCA-210ENST00000487445 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.57
GCA-210ENST00000487445 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.57
GCA-210ENST00000487445 MRPL50Q8N5N7 158 aaKnown RBP18.58■□□□□ 0.57
GCA-210ENST00000487445 GLI3P10071 1580 aa18.58■□□□□ 0.56
GCA-210ENST00000487445 PRAMEF22A3QJZ6 481 aa18.58■□□□□ 0.56
GCA-210ENST00000487445 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
GCA-210ENST00000487445 GIGYF1O75420 1035 aaPredicted RBP18.58■□□□□ 0.56
GCA-210ENST00000487445 SLC4A2P04920 1241 aa18.58■□□□□ 0.56
GCA-210ENST00000487445 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
GCA-210ENST00000487445 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
GCA-210ENST00000487445 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
GCA-210ENST00000487445 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
GCA-210ENST00000487445 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
GCA-210ENST00000487445 RBM6P78332 1123 aaKnown RBP18.56■□□□□ 0.56
GCA-210ENST00000487445 ZKSCAN2Q63HK3 967 aa18.56■□□□□ 0.56
GCA-210ENST00000487445 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
GCA-210ENST00000487445 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
GCA-210ENST00000487445 HOXB7P09629 217 aa18.56■□□□□ 0.56
GCA-210ENST00000487445 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
GCA-210ENST00000487445 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
GCA-210ENST00000487445 IPO8O15397 1037 aaKnown RBP18.55■□□□□ 0.56
GCA-210ENST00000487445 TNNQ9UQP3 1299 aa18.55■□□□□ 0.56
GCA-210ENST00000487445 WNK3Q9BYP7 1800 aa18.54■□□□□ 0.56
GCA-210ENST00000487445 KCNQ2O43526 872 aa18.54■□□□□ 0.56
GCA-210ENST00000487445 SNRPA1P09661 255 aaKnown RBP18.54■□□□□ 0.56
GCA-210ENST00000487445 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
GCA-210ENST00000487445 HEG1Q9ULI3 1381 aa18.54■□□□□ 0.56
GCA-210ENST00000487445 BRPF1P55201 1214 aaPredicted RBP18.53■□□□□ 0.56
GCA-210ENST00000487445 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
GCA-210ENST00000487445 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
GCA-210ENST00000487445 CHMP4AQ9BY43 222 aa18.53■□□□□ 0.56
GCA-210ENST00000487445 BCL9O00512 1426 aa18.53■□□□□ 0.56
GCA-210ENST00000487445 RXRBP28702 533 aa18.53■□□□□ 0.56
GCA-210ENST00000487445 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
GCA-210ENST00000487445 FTSJ3Q8IY81 847 aaKnown RBP18.53■□□□□ 0.56
GCA-210ENST00000487445 TRIM27P14373 513 aa18.52■□□□□ 0.56
GCA-210ENST00000487445 EXOC6Q8TAG9 804 aa18.52■□□□□ 0.56
GCA-210ENST00000487445 CRBNQ96SW2 442 aa18.52■□□□□ 0.56
GCA-210ENST00000487445 PDE3AQ14432 1141 aa18.51■□□□□ 0.55
GCA-210ENST00000487445 CHPF2Q9P2E5 772 aa18.51■□□□□ 0.55
GCA-210ENST00000487445 RGS17Q9UGC6 210 aaPredicted RBP18.51■□□□□ 0.55
GCA-210ENST00000487445 USP16Q9Y5T5 823 aa18.51■□□□□ 0.55
GCA-210ENST00000487445 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
GCA-210ENST00000487445 G2E3Q7L622 706 aa18.51■□□□□ 0.55
GCA-210ENST00000487445 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
GCA-210ENST00000487445 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
GCA-210ENST00000487445 ANXA1P04083 346 aa18.5■□□□□ 0.55
GCA-210ENST00000487445 RLBP1P12271 317 aa18.5■□□□□ 0.55
GCA-210ENST00000487445 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
GCA-210ENST00000487445 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
GCA-210ENST00000487445 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
GCA-210ENST00000487445 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
GCA-210ENST00000487445 SIPA1L3O60292 1781 aaPredicted RBP18.49■□□□□ 0.55
GCA-210ENST00000487445 MS4A1P11836 297 aa18.49■□□□□ 0.55
GCA-210ENST00000487445 POTEAQ6S8J7 498 aa18.49■□□□□ 0.55
GCA-210ENST00000487445 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
GCA-210ENST00000487445 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
GCA-210ENST00000487445 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
GCA-210ENST00000487445 FLIIQ13045 1269 aa18.47■□□□□ 0.55
GCA-210ENST00000487445 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms