RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 ZNF530Q6P9A1 599 aaPredicted RBP30.44■■■□□ 2.46
SRM-205ENST00000487300 ATG3Q9NT62 314 aa30.43■■■□□ 2.46
SRM-205ENST00000487300 CHD4Q14839 1912 aa30.41■■■□□ 2.46
SRM-205ENST00000487300 MRC1P22897 1456 aa30.41■■■□□ 2.46
SRM-205ENST00000487300 TJP1Q07157 1748 aa30.41■■■□□ 2.46
SRM-205ENST00000487300 AMIGO3Q86WK7 504 aa30.4■■■□□ 2.46
SRM-205ENST00000487300 FLAD1Q8NFF5 587 aa30.4■■■□□ 2.46
SRM-205ENST00000487300 LINC00116Q8NCU8 138 aa30.39■■■□□ 2.46
SRM-205ENST00000487300 MYH14Q7Z406 1995 aaKnown RBP30.38■■■□□ 2.45
SRM-205ENST00000487300 POLD1P28340 1107 aa30.38■■■□□ 2.45
SRM-205ENST00000487300 ITPK1Q13572 414 aa30.38■■■□□ 2.45
SRM-205ENST00000487300 C4AP0C0L4 1744 aa30.36■■■□□ 2.45
SRM-205ENST00000487300 AK7Q96M32 723 aa30.36■■■□□ 2.45
SRM-205ENST00000487300 DIAPH1O60610 1272 aaKnown RBP30.35■■■□□ 2.45
SRM-205ENST00000487300 C1orf141Q5JVX7 400 aa30.35■■■□□ 2.45
SRM-205ENST00000487300 SLC4A9Q96Q91 983 aa30.34■■■□□ 2.45
SRM-205ENST00000487300 UBR2Q8IWV8 1755 aa30.33■■■□□ 2.45
SRM-205ENST00000487300 DCAF8L1A6NGE4 600 aa30.33■■■□□ 2.45
SRM-205ENST00000487300 SSFA2P28290 1259 aa30.33■■■□□ 2.45
SRM-205ENST00000487300 SIPA1L3O60292 1781 aaPredicted RBP30.33■■■□□ 2.45
SRM-205ENST00000487300 ATP6V1AP38606 617 aa30.32■■■□□ 2.44
SRM-205ENST00000487300 AKAP4Q5JQC9 854 aa30.31■■■□□ 2.44
SRM-205ENST00000487300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.3■■■□□ 2.44
SRM-205ENST00000487300 MSH5O43196 834 aa30.3■■■□□ 2.44
SRM-205ENST00000487300 HMOX1P09601 288 aa30.3■■■□□ 2.44
SRM-205ENST00000487300 CABP4P57796 275 aa30.3■■■□□ 2.44
SRM-205ENST00000487300 KIF13BQ9NQT8 1826 aa30.28■■■□□ 2.44
SRM-205ENST00000487300 MSL1Q68DK7 614 aa30.27■■■□□ 2.44
SRM-205ENST00000487300 NFATC2IPQ8NCF5 419 aa30.26■■■□□ 2.43
SRM-205ENST00000487300 CNTNAP4Q9C0A0 1308 aa30.25■■■□□ 2.43
SRM-205ENST00000487300 GNPATO15228 680 aa30.25■■■□□ 2.43
SRM-205ENST00000487300 SMIM5Q71RC9 77 aa30.25■■■□□ 2.43
SRM-205ENST00000487300 KCPQ6ZWJ8 1503 aa30.24■■■□□ 2.43
SRM-205ENST00000487300 PHF14O94880 888 aa30.24■■■□□ 2.43
SRM-205ENST00000487300 YY1P25490 414 aa30.24■■■□□ 2.43
SRM-205ENST00000487300 MTHFSDQ2M296 383 aaKnown RBP30.24■■■□□ 2.43
SRM-205ENST00000487300 RC3H1Q5TC82 1133 aaKnown RBP30.23■■■□□ 2.43
SRM-205ENST00000487300 NLGN2Q8NFZ4 835 aa30.22■■■□□ 2.43
SRM-205ENST00000487300 RBM42Q9BTD8 480 aaKnown RBP30.22■■■□□ 2.43
SRM-205ENST00000487300 KIAA1551Q9HCM1 1747 aa30.22■■■□□ 2.43
SRM-205ENST00000487300 SLC52A2Q9HAB3 445 aa30.21■■■□□ 2.43
SRM-205ENST00000487300 CNGB1Q14028 1251 aaPredicted RBP30.2■■■□□ 2.43
SRM-205ENST00000487300 LGR6Q9HBX8 967 aa30.2■■■□□ 2.43
SRM-205ENST00000487300 RNMTO43148 476 aaKnown RBP30.19■■■□□ 2.42
SRM-205ENST00000487300 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
SRM-205ENST00000487300 ADRA2BP18089 450 aa30.17■■■□□ 2.42
SRM-205ENST00000487300 CD2APQ9Y5K6 639 aa30.17■■■□□ 2.42
SRM-205ENST00000487300 PTCD1O75127 700 aaKnown RBP30.16■■■□□ 2.42
SRM-205ENST00000487300 PPP2R1AP30153 589 aa30.16■■■□□ 2.42
SRM-205ENST00000487300 RTCBQ9Y3I0 505 aaKnown RBP30.16■■■□□ 2.42
SRM-205ENST00000487300 U2SURPO15042 1029 aaKnown RBP30.15■■■□□ 2.42
SRM-205ENST00000487300 RPS6KA4O75676 772 aa30.14■■■□□ 2.42
SRM-205ENST00000487300 CFAP53Q96M91 514 aa30.13■■■□□ 2.41
SRM-205ENST00000487300 RSPH6AQ9H0K4 717 aa30.12■■■□□ 2.41
SRM-205ENST00000487300 BRCA1P38398 1863 aaKnown RBP30.11■■■□□ 2.41
SRM-205ENST00000487300 CRKLP46109 303 aaKnown RBP30.11■■■□□ 2.41
SRM-205ENST00000487300 TRAPPC3LQ5T215 181 aa30.11■■■□□ 2.41
SRM-205ENST00000487300 GPR162Q16538 588 aa30.1■■■□□ 2.41
SRM-205ENST00000487300 GAS2L2Q8NHY3 880 aa30.1■■■□□ 2.41
SRM-205ENST00000487300 ARHGEF1Q92888 912 aaKnown RBP30.1■■■□□ 2.41
SRM-205ENST00000487300 CEMIPQ8WUJ3 1361 aa30.09■■■□□ 2.41
SRM-205ENST00000487300 DLG5Q8TDM6 1919 aa30.08■■■□□ 2.41
SRM-205ENST00000487300 N4BP2Q86UW6 1770 aaPredicted RBP30.08■■■□□ 2.41
SRM-205ENST00000487300 YBX3P16989 372 aaKnown RBP eCLIP30.07■■■□□ 2.45e-16■■■□□ 15.1
SRM-205ENST00000487300 GNAT3A8MTJ3 354 aa30.06■■■□□ 2.4
SRM-205ENST00000487300 GYS1P13807 737 aa30.06■■■□□ 2.4
SRM-205ENST00000487300 SLC39A6Q13433 755 aa30.06■■■□□ 2.4
SRM-205ENST00000487300 INTS5Q6P9B9 1019 aaKnown RBP30.06■■■□□ 2.4
SRM-205ENST00000487300 C10orf71Q711Q0 1435 aa30.05■■■□□ 2.4
SRM-205ENST00000487300 PRKAR2BP31323 418 aa30.05■■■□□ 2.4
SRM-205ENST00000487300 IL17REQ8NFR9 667 aa30.05■■■□□ 2.4
SRM-205ENST00000487300 PHACTR3Q96KR7 559 aa30.05■■■□□ 2.4
SRM-205ENST00000487300 MMP10P09238 476 aa30.04■■■□□ 2.4
SRM-205ENST00000487300 DNAJC10Q8IXB1 793 aa30.04■■■□□ 2.4
SRM-205ENST00000487300 VSIG10Q8N0Z9 540 aa30.04■■■□□ 2.4
SRM-205ENST00000487300 NLGN1Q8N2Q7 840 aa30.04■■■□□ 2.4
SRM-205ENST00000487300 NUDCQ9Y266 331 aa30.04■■■□□ 2.4
SRM-205ENST00000487300 USP42Q9H9J4 1324 aaKnown RBP30.02■■■□□ 2.4
SRM-205ENST00000487300 CYP19A1P11511 503 aaPredicted RBP30.02■■■□□ 2.4
SRM-205ENST00000487300 RFC4P35249 363 aa30.02■■■□□ 2.4
SRM-205ENST00000487300 PXDNLA1KZ92 1463 aa30.01■■■□□ 2.4
SRM-205ENST00000487300 CCDC87Q9NVE4 849 aa30.01■■■□□ 2.39
SRM-205ENST00000487300 NRXN2Q9P2S2 1712 aa30.01■■■□□ 2.39
SRM-205ENST00000487300 AFDNP55196 1824 aaKnown RBP30.01■■■□□ 2.39
SRM-205ENST00000487300 SOS1Q07889 1333 aaPredicted RBP30■■■□□ 2.39
SRM-205ENST00000487300 SCN7AQ01118 1682 aa29.99■■■□□ 2.39
SRM-205ENST00000487300 FCHSD2O94868 740 aa29.99■■■□□ 2.39
SRM-205ENST00000487300 PELP1Q8IZL8 1130 aaKnown RBP29.99■■■□□ 2.39
SRM-205ENST00000487300 GRIN3BO60391 1043 aa29.98■■■□□ 2.39
SRM-205ENST00000487300 U2AF1L5P0DN76 240 aaPredicted RBP29.98■■■□□ 2.39
SRM-205ENST00000487300 U2AF1Q01081 240 aaKnown RBP eCLIP29.98■■■□□ 2.39
SRM-205ENST00000487300 ZNF784Q8NCA9 323 aaPredicted RBP29.98■■■□□ 2.39
SRM-205ENST00000487300 TEFQ10587 303 aa29.97■■■□□ 2.39
SRM-205ENST00000487300 ARFGEF1Q9Y6D6 1849 aa29.96■■■□□ 2.39
SRM-205ENST00000487300 SRP68Q9UHB9 627 aaKnown RBP29.96■■■□□ 2.39
SRM-205ENST00000487300 COL15A1P39059 1388 aa29.95■■■□□ 2.39
SRM-205ENST00000487300 HEG1Q9ULI3 1381 aa29.95■■■□□ 2.39
SRM-205ENST00000487300 ZNF790Q6PG37 636 aa29.95■■■□□ 2.39
SRM-205ENST00000487300 ZBTB1Q9Y2K1 713 aa29.94■■■□□ 2.38
SRM-205ENST00000487300 BCORQ6W2J9 1755 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms