RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 COL22A1Q8NFW1 1626 aaPredicted RBP27.47■■□□□ 1.99
TRADD-202ENST00000486556 IGHDP01880 384 aa27.47■■□□□ 1.99
TRADD-202ENST00000486556 RWDD1Q9H446 243 aaPredicted RBP27.47■■□□□ 1.99
TRADD-202ENST00000486556 KDM3BQ7LBC6 1761 aa27.45■■□□□ 1.98
TRADD-202ENST00000486556 DCAF5Q96JK2 942 aa27.45■■□□□ 1.98
TRADD-202ENST00000486556 PKD1L3Q7Z443 1732 aa27.45■■□□□ 1.98
TRADD-202ENST00000486556 ZBTB7BO15156 539 aaPredicted RBP27.44■■□□□ 1.98
TRADD-202ENST00000486556 INTS3Q68E01 1043 aaKnown RBP27.43■■□□□ 1.98
TRADD-202ENST00000486556 STRN4Q9NRL3 753 aa27.43■■□□□ 1.98
TRADD-202ENST00000486556 VIRMAQ69YN4 1812 aaKnown RBP27.43■■□□□ 1.98
TRADD-202ENST00000486556 CYP27B1O15528 508 aa27.42■■□□□ 1.98
TRADD-202ENST00000486556 IL2RBP14784 551 aa27.42■■□□□ 1.98
TRADD-202ENST00000486556 LARP1Q6PKG0 1096 aaKnown RBP27.42■■□□□ 1.98
TRADD-202ENST00000486556 SLC52A2Q9HAB3 445 aa27.42■■□□□ 1.98
TRADD-202ENST00000486556 ZCRB1Q8TBF4 217 aaKnown RBP27.41■■□□□ 1.98
TRADD-202ENST00000486556 PARP4Q9UKK3 1724 aaKnown RBP27.4■■□□□ 1.98
TRADD-202ENST00000486556 BTG4Q9NY30 223 aa27.4■■□□□ 1.98
TRADD-202ENST00000486556 KDM6AO15550 1401 aaPredicted RBP27.4■■□□□ 1.98
TRADD-202ENST00000486556 COL14A1Q05707 1796 aaKnown RBP27.4■■□□□ 1.98
TRADD-202ENST00000486556 CACNA1FO60840 1977 aa27.39■■□□□ 1.98
TRADD-202ENST00000486556 HDAC1Q13547 482 aaPredicted RBP27.39■■□□□ 1.98
TRADD-202ENST00000486556 HDGFL1Q5TGJ6 251 aa27.39■■□□□ 1.98
TRADD-202ENST00000486556 SIPA1L3O60292 1781 aaPredicted RBP27.39■■□□□ 1.98
TRADD-202ENST00000486556 SCN11AQ9UI33 1791 aa27.39■■□□□ 1.98
TRADD-202ENST00000486556 PCDH11XQ9BZA7 1347 aa27.39■■□□□ 1.97
TRADD-202ENST00000486556 PCDH11YQ9BZA8 1340 aa27.39■■□□□ 1.97
TRADD-202ENST00000486556 RGS12O14924 1447 aa27.39■■□□□ 1.97
TRADD-202ENST00000486556 PHLPP1O60346 1717 aa27.38■■□□□ 1.97
TRADD-202ENST00000486556 HEG1Q9ULI3 1381 aa27.38■■□□□ 1.97
TRADD-202ENST00000486556 KCNQ3O43525 872 aa27.38■■□□□ 1.97
TRADD-202ENST00000486556 COL16A1Q07092 1604 aaPredicted RBP27.37■■□□□ 1.97
TRADD-202ENST00000486556 G2E3Q7L622 706 aa27.37■■□□□ 1.97
TRADD-202ENST00000486556 FLIIQ13045 1269 aa27.35■■□□□ 1.97
TRADD-202ENST00000486556 NFATC2IPQ8NCF5 419 aa27.35■■□□□ 1.97
TRADD-202ENST00000486556 GIGYF1O75420 1035 aaPredicted RBP27.34■■□□□ 1.97
TRADD-202ENST00000486556 PIP4K2BP78356 416 aa27.34■■□□□ 1.97
TRADD-202ENST00000486556 NKX1-1Q15270 411 aaPredicted RBP27.34■■□□□ 1.97
TRADD-202ENST00000486556 ZNF790Q6PG37 636 aa27.34■■□□□ 1.97
TRADD-202ENST00000486556 MRC1P22897 1456 aa27.33■■□□□ 1.97
TRADD-202ENST00000486556 CCT4P50991 539 aaKnown RBP27.32■■□□□ 1.96
TRADD-202ENST00000486556 NECTIN2Q92692 538 aa27.32■■□□□ 1.96
TRADD-202ENST00000486556 EIF2S2P20042 333 aaKnown RBP27.32■■□□□ 1.96
TRADD-202ENST00000486556 RBM19Q9Y4C8 960 aaKnown RBP27.32■■□□□ 1.96
TRADD-202ENST00000486556 UBAP1LF5GYI3 381 aa27.31■■□□□ 1.96
TRADD-202ENST00000486556 CABP4P57796 275 aa27.3■■□□□ 1.96
TRADD-202ENST00000486556 FKBP5Q13451 457 aaPredicted RBP27.3■■□□□ 1.96
TRADD-202ENST00000486556 ERVV-2B6SEH9 535 aa27.3■■□□□ 1.96
TRADD-202ENST00000486556 DBF4Q9UBU7 674 aaPredicted RBP27.29■■□□□ 1.96
TRADD-202ENST00000486556 TTC5Q8N0Z6 440 aa27.26■■□□□ 1.95
TRADD-202ENST00000486556 USP35Q9P2H5 1018 aa27.26■■□□□ 1.95
TRADD-202ENST00000486556 F6X3S4 739 aa27.25■■□□□ 1.95
TRADD-202ENST00000486556 SLC39A6Q13433 755 aa27.25■■□□□ 1.95
TRADD-202ENST00000486556 SMC5Q8IY18 1101 aa27.25■■□□□ 1.95
TRADD-202ENST00000486556 CHPF2Q9P2E5 772 aa27.25■■□□□ 1.95
TRADD-202ENST00000486556 SLC4A10Q6U841 1118 aa27.25■■□□□ 1.95
TRADD-202ENST00000486556 SKAP1Q86WV1 359 aa27.25■■□□□ 1.95
TRADD-202ENST00000486556 DDX54Q8TDD1 881 aaKnown RBP27.24■■□□□ 1.95
TRADD-202ENST00000486556 PHAXQ9H814 394 aaKnown RBP27.23■■□□□ 1.95
TRADD-202ENST00000486556 PDZRN3Q9UPQ7 1066 aa27.23■■□□□ 1.95
TRADD-202ENST00000486556 PXDNLA1KZ92 1463 aa27.22■■□□□ 1.95
TRADD-202ENST00000486556 ADAMTS2O95450 1211 aa27.22■■□□□ 1.95
TRADD-202ENST00000486556 RPAP2Q8IXW5 612 aaPredicted RBP27.22■■□□□ 1.95
TRADD-202ENST00000486556 FMNL2Q96PY5 1086 aa27.22■■□□□ 1.95
TRADD-202ENST00000486556 DISP2A7MBM2 1401 aa27.22■■□□□ 1.95
TRADD-202ENST00000486556 RGS3P49796 1198 aa27.21■■□□□ 1.95
TRADD-202ENST00000486556 HYPKQ9NX55 129 aa27.21■■□□□ 1.95
TRADD-202ENST00000486556 SNRPA1P09661 255 aaKnown RBP27.2■■□□□ 1.95
TRADD-202ENST00000486556 GCC1Q96CN9 775 aa27.2■■□□□ 1.95
TRADD-202ENST00000486556 ZNF496Q96IT1 587 aaPredicted RBP27.2■■□□□ 1.95
TRADD-202ENST00000486556 CDCA7Q9BWT1 371 aaPredicted RBP27.2■■□□□ 1.95
TRADD-202ENST00000486556 C1orf115Q9H7X2 142 aa27.2■■□□□ 1.94
TRADD-202ENST00000486556 THRAP3Q9Y2W1 955 aaKnown RBP27.2■■□□□ 1.94
TRADD-202ENST00000486556 SHANK3Q9BYB0 1731 aa27.19■■□□□ 1.94
TRADD-202ENST00000486556 PDE4AP27815 886 aa27.19■■□□□ 1.94
TRADD-202ENST00000486556 DDX21Q9NR30 783 aaKnown RBP eCLIP27.19■■□□□ 1.94
TRADD-202ENST00000486556 PRAMEF22A3QJZ6 481 aa27.18■■□□□ 1.94
TRADD-202ENST00000486556 SIRT2Q8IXJ6 389 aa27.18■■□□□ 1.94
TRADD-202ENST00000486556 MEIS3Q99687 375 aa27.18■■□□□ 1.94
TRADD-202ENST00000486556 NUTM2BA6NNL0 878 aaPredicted RBP27.17■■□□□ 1.94
TRADD-202ENST00000486556 NUTM2EB1AL46 878 aaPredicted RBP27.17■■□□□ 1.94
TRADD-202ENST00000486556 GNAI3P08754 354 aa27.17■■□□□ 1.94
TRADD-202ENST00000486556 NUTM2AQ8IVF1 878 aaPredicted RBP27.17■■□□□ 1.94
TRADD-202ENST00000486556 BACH2Q9BYV9 841 aa27.17■■□□□ 1.94
TRADD-202ENST00000486556 EXOC5O00471 708 aa27.16■■□□□ 1.94
TRADD-202ENST00000486556 ANKRD44Q8N8A2 993 aa27.16■■□□□ 1.94
TRADD-202ENST00000486556 PLCH1Q4KWH8 1693 aa27.16■■□□□ 1.94
TRADD-202ENST00000486556 CERKQ8TCT0 537 aa27.16■■□□□ 1.94
TRADD-202ENST00000486556 JCADQ9P266 1359 aa27.15■■□□□ 1.94
TRADD-202ENST00000486556 DNAAF4Q8WXU2 420 aa27.15■■□□□ 1.94
TRADD-202ENST00000486556 SPATA31A1Q5TZJ5 1347 aa27.14■■□□□ 1.94
TRADD-202ENST00000486556 PI4KAP2A4QPH2 592 aa27.13■■□□□ 1.93
TRADD-202ENST00000486556 PI4KAP1Q8N8J0 262 aa27.13■■□□□ 1.93
TRADD-202ENST00000486556 SRCIN1Q9C0H9 1055 aa27.13■■□□□ 1.93
TRADD-202ENST00000486556 NUCB1Q02818 461 aa27.13■■□□□ 1.93
TRADD-202ENST00000486556 PDIA6Q15084 440 aa27.13■■□□□ 1.93
TRADD-202ENST00000486556 SLIT2O94813 1529 aa27.13■■□□□ 1.93
TRADD-202ENST00000486556 ANXA1P04083 346 aa27.12■■□□□ 1.93
TRADD-202ENST00000486556 GNAI2P04899 355 aa27.12■■□□□ 1.93
TRADD-202ENST00000486556 CEP85Q6P2H3 762 aa27.12■■□□□ 1.93
TRADD-202ENST00000486556 KSR2Q6VAB6 950 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms