RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
SSR4-211ENST00000486204 KDRP35968 1356 aa17.44■□□□□ 0.38
SSR4-211ENST00000486204 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
SSR4-211ENST00000486204 JMYQ8N9B5 988 aa17.43■□□□□ 0.38
SSR4-211ENST00000486204 PLEKHG2Q9H7P9 1386 aa17.42■□□□□ 0.38
SSR4-211ENST00000486204 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
SSR4-211ENST00000486204 SCN11AQ9UI33 1791 aa17.41■□□□□ 0.38
SSR4-211ENST00000486204 HTRA3P83110 453 aa17.41■□□□□ 0.38
SSR4-211ENST00000486204 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
SSR4-211ENST00000486204 AEBP1Q8IUX7 1158 aa17.4■□□□□ 0.38
SSR4-211ENST00000486204 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
SSR4-211ENST00000486204 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
SSR4-211ENST00000486204 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.37
SSR4-211ENST00000486204 TATP17735 454 aaPredicted RBP17.39■□□□□ 0.37
SSR4-211ENST00000486204 RBM46Q8TBY0 533 aaKnown RBP17.39■□□□□ 0.37
SSR4-211ENST00000486204 RALBP1Q15311 655 aa17.38■□□□□ 0.37
SSR4-211ENST00000486204 ADAMTS7Q9UKP4 1686 aa17.38■□□□□ 0.37
SSR4-211ENST00000486204 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
SSR4-211ENST00000486204 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
SSR4-211ENST00000486204 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
SSR4-211ENST00000486204 AK7Q96M32 723 aa17.36■□□□□ 0.37
SSR4-211ENST00000486204 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
SSR4-211ENST00000486204 PHF14O94880 888 aa17.35■□□□□ 0.37
SSR4-211ENST00000486204 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
SSR4-211ENST00000486204 CFAP53Q96M91 514 aa17.35■□□□□ 0.37
SSR4-211ENST00000486204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSR4-211ENST00000486204 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
SSR4-211ENST00000486204 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
SSR4-211ENST00000486204 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
SSR4-211ENST00000486204 CYP27B1O15528 508 aa17.34■□□□□ 0.37
SSR4-211ENST00000486204 C5P01031 1676 aa17.34■□□□□ 0.37
SSR4-211ENST00000486204 FSTL1Q12841 308 aa17.34■□□□□ 0.37
SSR4-211ENST00000486204 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
SSR4-211ENST00000486204 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.37
SSR4-211ENST00000486204 CICQ96RK0 1608 aaPredicted RBP17.33■□□□□ 0.37
SSR4-211ENST00000486204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
SSR4-211ENST00000486204 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
SSR4-211ENST00000486204 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
SSR4-211ENST00000486204 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
SSR4-211ENST00000486204 HMOX1P09601 288 aa17.32■□□□□ 0.36
SSR4-211ENST00000486204 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
SSR4-211ENST00000486204 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
SSR4-211ENST00000486204 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
SSR4-211ENST00000486204 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
SSR4-211ENST00000486204 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
SSR4-211ENST00000486204 PHKG2P15735 406 aa17.29■□□□□ 0.36
SSR4-211ENST00000486204 SSFA2P28290 1259 aa17.29■□□□□ 0.36
SSR4-211ENST00000486204 TGFB2P61812 414 aa17.29■□□□□ 0.36
SSR4-211ENST00000486204 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
SSR4-211ENST00000486204 PCNTO95613 3336 aa17.29■□□□□ 0.36
SSR4-211ENST00000486204 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
SSR4-211ENST00000486204 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
SSR4-211ENST00000486204 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
SSR4-211ENST00000486204 C4BP0C0L5 1744 aa17.27■□□□□ 0.36
SSR4-211ENST00000486204 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
SSR4-211ENST00000486204 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
SSR4-211ENST00000486204 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
SSR4-211ENST00000486204 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
SSR4-211ENST00000486204 MRC1P22897 1456 aa17.26■□□□□ 0.35
SSR4-211ENST00000486204 SLC34A2O95436 690 aa17.26■□□□□ 0.35
SSR4-211ENST00000486204 MMP10P09238 476 aa17.26■□□□□ 0.35
SSR4-211ENST00000486204 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
SSR4-211ENST00000486204 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
SSR4-211ENST00000486204 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
SSR4-211ENST00000486204 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
SSR4-211ENST00000486204 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
SSR4-211ENST00000486204 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
SSR4-211ENST00000486204 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SSR4-211ENST00000486204 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
SSR4-211ENST00000486204 ZNF831Q5JPB2 1677 aa17.24■□□□□ 0.35
SSR4-211ENST00000486204 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
SSR4-211ENST00000486204 PRKAR2BP31323 418 aa17.24■□□□□ 0.35
SSR4-211ENST00000486204 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
SSR4-211ENST00000486204 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
SSR4-211ENST00000486204 UBR2Q8IWV8 1755 aa17.24■□□□□ 0.35
SSR4-211ENST00000486204 DPEP1P16444 411 aa17.23■□□□□ 0.35
SSR4-211ENST00000486204 MTHFSDQ2M296 383 aaKnown RBP17.23■□□□□ 0.35
SSR4-211ENST00000486204 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
SSR4-211ENST00000486204 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SSR4-211ENST00000486204 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
SSR4-211ENST00000486204 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
SSR4-211ENST00000486204 COL5A3P25940 1745 aaPredicted RBP17.21■□□□□ 0.35
SSR4-211ENST00000486204 GNPATO15228 680 aa17.21■□□□□ 0.35
SSR4-211ENST00000486204 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
SSR4-211ENST00000486204 SIK1P57059 783 aa17.2■□□□□ 0.34
SSR4-211ENST00000486204 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
SSR4-211ENST00000486204 PIGBQ92521 554 aa17.2■□□□□ 0.34
SSR4-211ENST00000486204 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
SSR4-211ENST00000486204 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
SSR4-211ENST00000486204 TJP1Q07157 1748 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 ANP32CO43423 234 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
SSR4-211ENST00000486204 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 NLGN1Q8N2Q7 840 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 PLEKHF1Q96S99 279 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
SSR4-211ENST00000486204 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
SSR4-211ENST00000486204 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms