RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SULT6B1Q6IMI4 303 aa10.06□□□□□ -0.8
CPNE1-226ENST00000486021 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
CPNE1-226ENST00000486021 ADRA2BP18089 450 aa10.05□□□□□ -0.8
CPNE1-226ENST00000486021 AMER1Q5JTC6 1135 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-226ENST00000486021 SGIP1Q9BQI5 828 aa10.05□□□□□ -0.8
CPNE1-226ENST00000486021 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
CPNE1-226ENST00000486021 PDGFDQ9GZP0 370 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-226ENST00000486021 KDRP35968 1356 aa10.04□□□□□ -0.8
CPNE1-226ENST00000486021 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
CPNE1-226ENST00000486021 TRAPPC3LQ5T215 181 aa10.04□□□□□ -0.8
CPNE1-226ENST00000486021 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
CPNE1-226ENST00000486021 COL23A1Q86Y22 540 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-226ENST00000486021 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
CPNE1-226ENST00000486021 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-226ENST00000486021 IL13P35225 146 aa10.03□□□□□ -0.8
CPNE1-226ENST00000486021 KCNQ4P56696 695 aa10.03□□□□□ -0.8
CPNE1-226ENST00000486021 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
CPNE1-226ENST00000486021 NLGN1Q8N2Q7 840 aa10.03□□□□□ -0.8
CPNE1-226ENST00000486021 GAS2L2Q8NHY3 880 aa10.03□□□□□ -0.8
CPNE1-226ENST00000486021 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
CPNE1-226ENST00000486021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.02□□□□□ -0.81
CPNE1-226ENST00000486021 GNPATO15228 680 aa10.02□□□□□ -0.81
CPNE1-226ENST00000486021 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.81
CPNE1-226ENST00000486021 PHF14O94880 888 aa10.02□□□□□ -0.81
CPNE1-226ENST00000486021 RFC4P35249 363 aa10.02□□□□□ -0.81
CPNE1-226ENST00000486021 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
CPNE1-226ENST00000486021 ATG3Q9NT62 314 aa10.02□□□□□ -0.81
CPNE1-226ENST00000486021 ASAP1Q9ULH1 1129 aa10.02□□□□□ -0.81
CPNE1-226ENST00000486021 CICQ96RK0 1608 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-226ENST00000486021 TTC5Q8N0Z6 440 aa10.01□□□□□ -0.81
CPNE1-226ENST00000486021 CNTNAP4Q9C0A0 1308 aa10.01□□□□□ -0.81
CPNE1-226ENST00000486021 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
CPNE1-226ENST00000486021 RPS6KA4O75676 772 aa10□□□□□ -0.81
CPNE1-226ENST00000486021 TEFQ10587 303 aa10□□□□□ -0.81
CPNE1-226ENST00000486021 NFATC2IPQ8NCF5 419 aa10□□□□□ -0.81
CPNE1-226ENST00000486021 TEX13AQ9BXU3 409 aaPredicted RBP10□□□□□ -0.81
CPNE1-226ENST00000486021 SLC52A2Q9HAB3 445 aa10□□□□□ -0.81
CPNE1-226ENST00000486021 HMOX1P09601 288 aa9.99□□□□□ -0.81
CPNE1-226ENST00000486021 CCDC87Q9NVE4 849 aa9.99□□□□□ -0.81
CPNE1-226ENST00000486021 PARP3Q9Y6F1 533 aa9.99□□□□□ -0.81
CPNE1-226ENST00000486021 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
CPNE1-226ENST00000486021 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
CPNE1-226ENST00000486021 ZPR1O75312 459 aa9.98□□□□□ -0.81
CPNE1-226ENST00000486021 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
CPNE1-226ENST00000486021 LINC00116Q8NCU8 138 aa9.98□□□□□ -0.81
CPNE1-226ENST00000486021 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
CPNE1-226ENST00000486021 C4AP0C0L4 1744 aa9.97□□□□□ -0.81
CPNE1-226ENST00000486021 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
CPNE1-226ENST00000486021 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
CPNE1-226ENST00000486021 STARD3NLO95772 234 aa9.97□□□□□ -0.81
CPNE1-226ENST00000486021 TGFB2P61812 414 aa9.97□□□□□ -0.81
CPNE1-226ENST00000486021 MSL1Q68DK7 614 aa9.97□□□□□ -0.81
CPNE1-226ENST00000486021 AEBP1Q8IUX7 1158 aa9.97□□□□□ -0.81
CPNE1-226ENST00000486021 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
CPNE1-226ENST00000486021 KDM6AO15550 1401 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-226ENST00000486021 SRCAPQ6ZRS2 3230 aa9.97□□□□□ -0.81
CPNE1-226ENST00000486021 A0A087WZG4 1122 aa9.96□□□□□ -0.82
CPNE1-226ENST00000486021 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.82
CPNE1-226ENST00000486021 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.82
CPNE1-226ENST00000486021 TJP1Q07157 1748 aa9.96□□□□□ -0.82
CPNE1-226ENST00000486021 UBR2Q8IWV8 1755 aa9.96□□□□□ -0.82
CPNE1-226ENST00000486021 FCHSD2O94868 740 aa9.95□□□□□ -0.82
CPNE1-226ENST00000486021 CRKLP46109 303 aaKnown RBP9.95□□□□□ -0.82
CPNE1-226ENST00000486021 ITPK1Q13572 414 aa9.95□□□□□ -0.82
CPNE1-226ENST00000486021 MTHFSDQ2M296 383 aaKnown RBP9.95□□□□□ -0.82
CPNE1-226ENST00000486021 ARHGEF1Q92888 912 aaKnown RBP9.95□□□□□ -0.82
CPNE1-226ENST00000486021 MRC1P22897 1456 aa9.95□□□□□ -0.82
CPNE1-226ENST00000486021 SIPA1L3O60292 1781 aaPredicted RBP9.95□□□□□ -0.82
CPNE1-226ENST00000486021 ARFGEF1Q9Y6D6 1849 aa9.94□□□□□ -0.82
CPNE1-226ENST00000486021 HTATSF1O43719 755 aaKnown RBP9.94□□□□□ -0.82
CPNE1-226ENST00000486021 MMP10P09238 476 aa9.94□□□□□ -0.82
CPNE1-226ENST00000486021 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
CPNE1-226ENST00000486021 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
CPNE1-226ENST00000486021 N4BP2Q86UW6 1770 aaPredicted RBP9.93□□□□□ -0.82
CPNE1-226ENST00000486021 NLGN2Q8NFZ4 835 aa9.93□□□□□ -0.82
CPNE1-226ENST00000486021 FMNL2Q96PY5 1086 aa9.93□□□□□ -0.82
CPNE1-226ENST00000486021 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
CPNE1-226ENST00000486021 DLG5Q8TDM6 1919 aa9.92□□□□□ -0.82
CPNE1-226ENST00000486021 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
CPNE1-226ENST00000486021 ZNF784Q8NCA9 323 aaPredicted RBP9.92□□□□□ -0.82
CPNE1-226ENST00000486021 LGR6Q9HBX8 967 aa9.92□□□□□ -0.82
CPNE1-226ENST00000486021 COL3A1P02461 1466 aaPredicted RBP9.91□□□□□ -0.82
CPNE1-226ENST00000486021 USP42Q9H9J4 1324 aaKnown RBP9.91□□□□□ -0.82
CPNE1-226ENST00000486021 MAPK8IP3Q9UPT6 1336 aa9.91□□□□□ -0.82
CPNE1-226ENST00000486021 BTBD11A6QL63 1104 aa9.91□□□□□ -0.82
CPNE1-226ENST00000486021 GIGYF1O75420 1035 aaPredicted RBP9.91□□□□□ -0.82
CPNE1-226ENST00000486021 GYS1P13807 737 aa9.91□□□□□ -0.82
CPNE1-226ENST00000486021 PRKAR2BP31323 418 aa9.91□□□□□ -0.82
CPNE1-226ENST00000486021 RALBP1Q15311 655 aa9.91□□□□□ -0.82
CPNE1-226ENST00000486021 ZNF790Q6PG37 636 aa9.91□□□□□ -0.82
CPNE1-226ENST00000486021 PNISRQ8TF01 805 aaKnown RBP9.91□□□□□ -0.82
CPNE1-226ENST00000486021 BRCA1P38398 1863 aaKnown RBP9.91□□□□□ -0.82
CPNE1-226ENST00000486021 COL15A1P39059 1388 aa9.9□□□□□ -0.82
CPNE1-226ENST00000486021 NPHP1O15259 732 aa9.9□□□□□ -0.82
CPNE1-226ENST00000486021 CYP19A1P11511 503 aaPredicted RBP9.9□□□□□ -0.82
CPNE1-226ENST00000486021 DNAJC10Q8IXB1 793 aa9.9□□□□□ -0.82
CPNE1-226ENST00000486021 PIM2Q9P1W9 311 aa9.9□□□□□ -0.82
CPNE1-226ENST00000486021 NARFQ9UHQ1 456 aa9.9□□□□□ -0.82
CPNE1-226ENST00000486021 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
CPNE1-226ENST00000486021 HEG1Q9ULI3 1381 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 631.6 ms