RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 RGPD3A6NKT7 1758 aaPredicted RBP20.26■□□□□ 0.83
HDHD3-203ENST00000485934 RGPD4Q7Z3J3 1758 aa20.26■□□□□ 0.83
HDHD3-203ENST00000485934 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
HDHD3-203ENST00000485934 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
HDHD3-203ENST00000485934 RBM42Q9BTD8 480 aaKnown RBP20.24■□□□□ 0.83
HDHD3-203ENST00000485934 BTAF1O14981 1849 aa20.23■□□□□ 0.83
HDHD3-203ENST00000485934 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
HDHD3-203ENST00000485934 SLC15A2Q16348 729 aa20.23■□□□□ 0.83
HDHD3-203ENST00000485934 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
HDHD3-203ENST00000485934 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
HDHD3-203ENST00000485934 BTBD11A6QL63 1104 aa20.22■□□□□ 0.83
HDHD3-203ENST00000485934 TAF7Q15545 349 aaPredicted RBP20.22■□□□□ 0.83
HDHD3-203ENST00000485934 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
HDHD3-203ENST00000485934 MCM10Q7L590 875 aa20.22■□□□□ 0.83
HDHD3-203ENST00000485934 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
HDHD3-203ENST00000485934 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
HDHD3-203ENST00000485934 PTCD1O75127 700 aaKnown RBP20.2■□□□□ 0.82
HDHD3-203ENST00000485934 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.82
HDHD3-203ENST00000485934 TFCP2L1Q9NZI6 479 aa20.2■□□□□ 0.82
HDHD3-203ENST00000485934 MRC1P22897 1456 aa20.19■□□□□ 0.82
HDHD3-203ENST00000485934 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
HDHD3-203ENST00000485934 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
HDHD3-203ENST00000485934 ZNF790Q6PG37 636 aa20.19■□□□□ 0.82
HDHD3-203ENST00000485934 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
HDHD3-203ENST00000485934 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
HDHD3-203ENST00000485934 BABAM1Q9NWV8 329 aa20.18■□□□□ 0.82
HDHD3-203ENST00000485934 TOGARAM1Q9Y4F4 1720 aa20.18■□□□□ 0.82
HDHD3-203ENST00000485934 APAF1O14727 1248 aa20.17■□□□□ 0.82
HDHD3-203ENST00000485934 KCNQ4P56696 695 aa20.17■□□□□ 0.82
HDHD3-203ENST00000485934 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
HDHD3-203ENST00000485934 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
HDHD3-203ENST00000485934 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
HDHD3-203ENST00000485934 AK7Q96M32 723 aa20.17■□□□□ 0.82
HDHD3-203ENST00000485934 FMNL2Q96PY5 1086 aa20.17■□□□□ 0.82
HDHD3-203ENST00000485934 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
HDHD3-203ENST00000485934 SLC39A6Q13433 755 aa20.16■□□□□ 0.82
HDHD3-203ENST00000485934 FAM9BQ8IZU0 186 aa20.16■□□□□ 0.82
HDHD3-203ENST00000485934 NGEFQ8N5V2 710 aa20.16■□□□□ 0.82
HDHD3-203ENST00000485934 RC3H1Q5TC82 1133 aaKnown RBP20.15■□□□□ 0.82
HDHD3-203ENST00000485934 ANO8Q9HCE9 1232 aaPredicted RBP20.15■□□□□ 0.82
HDHD3-203ENST00000485934 RRP7AQ9Y3A4 280 aaKnown RBP20.15■□□□□ 0.82
HDHD3-203ENST00000485934 RREB1Q92766 1687 aa20.15■□□□□ 0.82
HDHD3-203ENST00000485934 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
HDHD3-203ENST00000485934 ITGB4P16144 1822 aa20.15■□□□□ 0.82
HDHD3-203ENST00000485934 ADAMTS7Q9UKP4 1686 aa20.14■□□□□ 0.81
HDHD3-203ENST00000485934 STARD3NLO95772 234 aa20.14■□□□□ 0.81
HDHD3-203ENST00000485934 SLC16A10Q8TF71 515 aa20.13■□□□□ 0.81
HDHD3-203ENST00000485934 ITPK1Q13572 414 aa20.12■□□□□ 0.81
HDHD3-203ENST00000485934 LY75O60449 1722 aa20.11■□□□□ 0.81
HDHD3-203ENST00000485934 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
HDHD3-203ENST00000485934 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
HDHD3-203ENST00000485934 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
HDHD3-203ENST00000485934 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
HDHD3-203ENST00000485934 ZNF496Q96IT1 587 aaPredicted RBP20.11■□□□□ 0.81
HDHD3-203ENST00000485934 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
HDHD3-203ENST00000485934 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
HDHD3-203ENST00000485934 NUP188Q5SRE5 1749 aa20.1■□□□□ 0.81
HDHD3-203ENST00000485934 SNRPA1P09661 255 aaKnown RBP20.1■□□□□ 0.81
HDHD3-203ENST00000485934 ADRA2BP18089 450 aa20.1■□□□□ 0.81
HDHD3-203ENST00000485934 SSFA2P28290 1259 aa20.1■□□□□ 0.81
HDHD3-203ENST00000485934 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
HDHD3-203ENST00000485934 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
HDHD3-203ENST00000485934 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
HDHD3-203ENST00000485934 HEG1Q9ULI3 1381 aa20.09■□□□□ 0.81
HDHD3-203ENST00000485934 GNPATO15228 680 aa20.09■□□□□ 0.81
HDHD3-203ENST00000485934 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
HDHD3-203ENST00000485934 MSH5O43196 834 aa20.08■□□□□ 0.81
HDHD3-203ENST00000485934 RPS6KA4O75676 772 aa20.08■□□□□ 0.81
HDHD3-203ENST00000485934 DNAJC10Q8IXB1 793 aa20.08■□□□□ 0.81
HDHD3-203ENST00000485934 SPON1Q9HCB6 807 aa20.08■□□□□ 0.81
HDHD3-203ENST00000485934 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
HDHD3-203ENST00000485934 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
HDHD3-203ENST00000485934 CFAP44Q96MT7 982 aa20.07■□□□□ 0.8
HDHD3-203ENST00000485934 MTFR1LQ9H019 292 aa20.07■□□□□ 0.8
HDHD3-203ENST00000485934 CCDC87Q9NVE4 849 aa20.07■□□□□ 0.8
HDHD3-203ENST00000485934 CHL1O00533 1208 aa20.06■□□□□ 0.8
HDHD3-203ENST00000485934 CYP19A1P11511 503 aaPredicted RBP20.06■□□□□ 0.8
HDHD3-203ENST00000485934 GNAI1P63096 354 aa20.06■□□□□ 0.8
HDHD3-203ENST00000485934 MIS18AQ9NYP9 233 aa20.06■□□□□ 0.8
HDHD3-203ENST00000485934 ZNF831Q5JPB2 1677 aa20.06■□□□□ 0.8
HDHD3-203ENST00000485934 PNPLA7Q6ZV29 1317 aa20.05■□□□□ 0.8
HDHD3-203ENST00000485934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
HDHD3-203ENST00000485934 MIER1Q8N108 512 aa20.05■□□□□ 0.8
HDHD3-203ENST00000485934 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
HDHD3-203ENST00000485934 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
HDHD3-203ENST00000485934 PAPPAQ13219 1627 aa20.05■□□□□ 0.8
HDHD3-203ENST00000485934 KCNQ3O43525 872 aa20.04■□□□□ 0.8
HDHD3-203ENST00000485934 EIF4A1P60842 406 aaKnown RBP20.04■□□□□ 0.8
HDHD3-203ENST00000485934 IFT57Q9NWB7 429 aa20.04■□□□□ 0.8
HDHD3-203ENST00000485934 PHF14O94880 888 aa20.03■□□□□ 0.8
HDHD3-203ENST00000485934 RFC4P35249 363 aa20.03■□□□□ 0.8
HDHD3-203ENST00000485934 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
HDHD3-203ENST00000485934 WWC1Q8IX03 1113 aa20.03■□□□□ 0.8
HDHD3-203ENST00000485934 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
HDHD3-203ENST00000485934 INTS5Q6P9B9 1019 aaKnown RBP20.02■□□□□ 0.8
HDHD3-203ENST00000485934 WDR63Q8IWG1 891 aa20.02■□□□□ 0.8
HDHD3-203ENST00000485934 A0A087WZG4 1122 aa20.01■□□□□ 0.79
HDHD3-203ENST00000485934 GIGYF1O75420 1035 aaPredicted RBP20.01■□□□□ 0.79
HDHD3-203ENST00000485934 POLD1P28340 1107 aa20.01■□□□□ 0.79
HDHD3-203ENST00000485934 IL16Q14005 1332 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms