RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
SCAF4-206ENST00000485790 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
SCAF4-206ENST00000485790 NFATC2IPQ8NCF5 419 aa18.65■□□□□ 0.58
SCAF4-206ENST00000485790 YBX3P16989 372 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■□□□□ 9.4
SCAF4-206ENST00000485790 ADRA2BP18089 450 aa18.64■□□□□ 0.57
SCAF4-206ENST00000485790 RFC4P35249 363 aa18.64■□□□□ 0.57
SCAF4-206ENST00000485790 SMIM5Q71RC9 77 aa18.64■□□□□ 0.57
SCAF4-206ENST00000485790 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
SCAF4-206ENST00000485790 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
SCAF4-206ENST00000485790 AMIGO3Q86WK7 504 aa18.63■□□□□ 0.57
SCAF4-206ENST00000485790 KIF7Q2M1P5 1343 aa18.63■□□□□ 0.57
SCAF4-206ENST00000485790 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
SCAF4-206ENST00000485790 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
SCAF4-206ENST00000485790 UTRNP46939 3433 aa18.62■□□□□ 0.57
SCAF4-206ENST00000485790 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SCAF4-206ENST00000485790 MMP10P09238 476 aa18.61■□□□□ 0.57
SCAF4-206ENST00000485790 ARHGEF1Q92888 912 aaKnown RBP18.61■□□□□ 0.57
SCAF4-206ENST00000485790 QSER1Q2KHR3 1735 aa18.6■□□□□ 0.57
SCAF4-206ENST00000485790 C1QTNF8P60827 252 aa18.6■□□□□ 0.57
SCAF4-206ENST00000485790 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
SCAF4-206ENST00000485790 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
SCAF4-206ENST00000485790 PER1O15534 1290 aaPredicted RBP18.59■□□□□ 0.57
SCAF4-206ENST00000485790 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
SCAF4-206ENST00000485790 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
SCAF4-206ENST00000485790 CNTNAP4Q9C0A0 1308 aa18.58■□□□□ 0.57
SCAF4-206ENST00000485790 TGFB2P61812 414 aa18.58■□□□□ 0.56
SCAF4-206ENST00000485790 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.56
SCAF4-206ENST00000485790 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
SCAF4-206ENST00000485790 KDRP35968 1356 aa18.56■□□□□ 0.56
SCAF4-206ENST00000485790 HMOX1P09601 288 aa18.56■□□□□ 0.56
SCAF4-206ENST00000485790 CCDC87Q9NVE4 849 aa18.56■□□□□ 0.56
SCAF4-206ENST00000485790 C4BP0C0L5 1744 aa18.56■□□□□ 0.56
SCAF4-206ENST00000485790 ANKRD26Q9UPS8 1709 aa18.55■□□□□ 0.56
SCAF4-206ENST00000485790 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
SCAF4-206ENST00000485790 C5P01031 1676 aa18.54■□□□□ 0.56
SCAF4-206ENST00000485790 GYS1P13807 737 aa18.54■□□□□ 0.56
SCAF4-206ENST00000485790 CRKLP46109 303 aaKnown RBP18.54■□□□□ 0.56
SCAF4-206ENST00000485790 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
SCAF4-206ENST00000485790 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
SCAF4-206ENST00000485790 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
SCAF4-206ENST00000485790 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.56
SCAF4-206ENST00000485790 KDM6AO15550 1401 aaPredicted RBP18.52■□□□□ 0.56
SCAF4-206ENST00000485790 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.56
SCAF4-206ENST00000485790 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.56
SCAF4-206ENST00000485790 ZPR1O75312 459 aa18.52■□□□□ 0.56
SCAF4-206ENST00000485790 MTHFSDQ2M296 383 aaKnown RBP18.52■□□□□ 0.56
SCAF4-206ENST00000485790 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
SCAF4-206ENST00000485790 WWC3Q9ULE0 1092 aa18.52■□□□□ 0.56
SCAF4-206ENST00000485790 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
SCAF4-206ENST00000485790 CFAP53Q96M91 514 aa18.51■□□□□ 0.55
SCAF4-206ENST00000485790 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
SCAF4-206ENST00000485790 TOGARAM1Q9Y4F4 1720 aa18.5■□□□□ 0.55
SCAF4-206ENST00000485790 ITGB4P16144 1822 aa18.5■□□□□ 0.55
SCAF4-206ENST00000485790 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
SCAF4-206ENST00000485790 BCS1LQ9Y276 419 aa18.49■□□□□ 0.55
SCAF4-206ENST00000485790 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 STARD3NLO95772 234 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 ARHGAP27Q6ZUM4 889 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 DNAJC10Q8IXB1 793 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 TTC5Q8N0Z6 440 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 TUBGCP6Q96RT7 1819 aa18.48■□□□□ 0.55
SCAF4-206ENST00000485790 GNAT3A8MTJ3 354 aa18.47■□□□□ 0.55
SCAF4-206ENST00000485790 TEFQ10587 303 aa18.47■□□□□ 0.55
SCAF4-206ENST00000485790 SLC39A6Q13433 755 aa18.47■□□□□ 0.55
SCAF4-206ENST00000485790 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
SCAF4-206ENST00000485790 FCHSD2O94868 740 aa18.46■□□□□ 0.55
SCAF4-206ENST00000485790 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
SCAF4-206ENST00000485790 DPEP1P16444 411 aa18.46■□□□□ 0.55
SCAF4-206ENST00000485790 FKBP8Q14318 412 aa18.46■□□□□ 0.55
SCAF4-206ENST00000485790 PIM2Q9P1W9 311 aa18.46■□□□□ 0.55
SCAF4-206ENST00000485790 SRP68Q9UHB9 627 aaKnown RBP18.46■□□□□ 0.55
SCAF4-206ENST00000485790 USP42Q9H9J4 1324 aaKnown RBP18.46■□□□□ 0.55
SCAF4-206ENST00000485790 TAF1LQ8IZX4 1826 aa18.45■□□□□ 0.54
SCAF4-206ENST00000485790 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
SCAF4-206ENST00000485790 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
SCAF4-206ENST00000485790 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
SCAF4-206ENST00000485790 TM4SF1P30408 202 aa18.44■□□□□ 0.54
SCAF4-206ENST00000485790 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
SCAF4-206ENST00000485790 CHD4Q14839 1912 aa18.44■□□□□ 0.54
SCAF4-206ENST00000485790 A0A087WZG4 1122 aa18.43■□□□□ 0.54
SCAF4-206ENST00000485790 DALRD3Q5D0E6 543 aaKnown RBP18.43■□□□□ 0.54
SCAF4-206ENST00000485790 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
SCAF4-206ENST00000485790 UBR3Q6ZT12 1888 aa18.41■□□□□ 0.54
SCAF4-206ENST00000485790 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
SCAF4-206ENST00000485790 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
SCAF4-206ENST00000485790 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
SCAF4-206ENST00000485790 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
SCAF4-206ENST00000485790 KCNA3P22001 575 aa18.39■□□□□ 0.53
SCAF4-206ENST00000485790 DDR1Q08345 913 aa18.39■□□□□ 0.53
SCAF4-206ENST00000485790 RTF1Q92541 710 aaKnown RBP18.39■□□□□ 0.53
SCAF4-206ENST00000485790 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
SCAF4-206ENST00000485790 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
SCAF4-206ENST00000485790 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCAF4-206ENST00000485790 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
SCAF4-206ENST00000485790 C10orf71Q711Q0 1435 aa18.38■□□□□ 0.53
SCAF4-206ENST00000485790 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
SCAF4-206ENST00000485790 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms