RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 MTFR1Q15390 333 aa9□□□□□ -0.97
SRRM1-213ENST00000485441 NPM2Q86SE8 214 aaKnown RBP9□□□□□ -0.97
SRRM1-213ENST00000485441 SNIP1Q8TAD8 396 aaKnown RBP9□□□□□ -0.97
SRRM1-213ENST00000485441 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
SRRM1-213ENST00000485441 PLA2G2EQ9NZK7 142 aa9□□□□□ -0.97
SRRM1-213ENST00000485441 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 NNTQ13423 1086 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 Q6ZVU0 165 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 COL26A1Q96A83 441 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 SEPT3Q9UH03 358 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 SERTAD1Q9UHV2 236 aa8.99□□□□□ -0.97
SRRM1-213ENST00000485441 IL2RAP01589 272 aa8.98□□□□□ -0.97
SRRM1-213ENST00000485441 FOXC1Q12948 553 aa8.98□□□□□ -0.97
SRRM1-213ENST00000485441 TOR4AQ9NXH8 423 aa8.98□□□□□ -0.97
SRRM1-213ENST00000485441 J3QL48 77 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 FOXO3O43524 673 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 ICMTO60725 284 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 ADH1AP07327 375 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 SMTNP53814 917 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 CBLBQ13191 982 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 NOM1Q5C9Z4 860 aaKnown RBP8.97□□□□□ -0.97
SRRM1-213ENST00000485441 POTEAQ6S8J7 498 aa8.97□□□□□ -0.97
SRRM1-213ENST00000485441 SCG3Q8WXD2 468 aaKnown RBP8.97□□□□□ -0.97
SRRM1-213ENST00000485441 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
SRRM1-213ENST00000485441 SCHIP1Q9P0W5 487 aaPredicted RBP8.97□□□□□ -0.97
SRRM1-213ENST00000485441 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
SRRM1-213ENST00000485441 A6NJY4 79 aa8.96□□□□□ -0.98
SRRM1-213ENST00000485441 ESCO1Q5FWF5 840 aa8.96□□□□□ -0.98
SRRM1-213ENST00000485441 FOXD4L5Q5VV16 416 aaPredicted RBP8.96□□□□□ -0.98
SRRM1-213ENST00000485441 DNAJC14Q6Y2X3 702 aaPredicted RBP8.96□□□□□ -0.98
SRRM1-213ENST00000485441 TRIM67Q6ZTA4 783 aa8.96□□□□□ -0.98
SRRM1-213ENST00000485441 FOXD4L4Q8WXT5 416 aaPredicted RBP8.96□□□□□ -0.98
SRRM1-213ENST00000485441 ITPKCQ96DU7 683 aa8.96□□□□□ -0.98
SRRM1-213ENST00000485441 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
SRRM1-213ENST00000485441 IQSEC3Q9UPP2 1182 aaPredicted RBP8.96□□□□□ -0.98
SRRM1-213ENST00000485441 DNMT3AQ9Y6K1 912 aaPredicted RBP8.96□□□□□ -0.98
SRRM1-213ENST00000485441 SMPD1P17405 629 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 STAG2Q8N3U4 1231 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 GTF3C2Q8WUA4 911 aaPredicted RBP8.95□□□□□ -0.98
SRRM1-213ENST00000485441 ESYT1Q9BSJ8 1104 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 USP3Q9Y6I4 520 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 WASF2Q9Y6W5 498 aa8.95□□□□□ -0.98
SRRM1-213ENST00000485441 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
SRRM1-213ENST00000485441 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
SRRM1-213ENST00000485441 TIMP2P16035 220 aa8.94□□□□□ -0.98
SRRM1-213ENST00000485441 PTGIRP43119 386 aa8.94□□□□□ -0.98
SRRM1-213ENST00000485441 CLN3Q13286 438 aa8.94□□□□□ -0.98
SRRM1-213ENST00000485441 CNKSR1Q969H4 720 aa8.94□□□□□ -0.98
SRRM1-213ENST00000485441 MKNK1Q9BUB5 465 aa8.94□□□□□ -0.98
SRRM1-213ENST00000485441 FHDC1Q9C0D6 1143 aaPredicted RBP8.94□□□□□ -0.98
SRRM1-213ENST00000485441 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
SRRM1-213ENST00000485441 SLC9A9Q8IVB4 645 aa8.93□□□□□ -0.98
SRRM1-213ENST00000485441 C2orf49Q9BVC5 232 aaPredicted RBP8.93□□□□□ -0.98
SRRM1-213ENST00000485441 ZFAND3Q9H8U3 227 aa8.93□□□□□ -0.98
SRRM1-213ENST00000485441 ZIC2O95409 532 aaPredicted RBP8.92□□□□□ -0.98
SRRM1-213ENST00000485441 NPR3P17342 541 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 PRR20EP86478 221 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 PRR20CP86479 221 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 PRR20DP86480 221 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 PRR20BP86481 221 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 PRR20AP86496 221 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 ZNF211Q13398 564 aaPredicted RBP8.92□□□□□ -0.98
SRRM1-213ENST00000485441 ANO2Q9NQ90 1003 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
SRRM1-213ENST00000485441 ABL1P00519 1130 aa8.91□□□□□ -0.98
SRRM1-213ENST00000485441 WDR4P57081 412 aaKnown RBP8.91□□□□□ -0.98
SRRM1-213ENST00000485441 CENPCQ03188 943 aa8.91□□□□□ -0.98
SRRM1-213ENST00000485441 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
SRRM1-213ENST00000485441 TBCELQ5QJ74 424 aa8.91□□□□□ -0.98
SRRM1-213ENST00000485441 CYP4X1Q8N118 509 aa8.91□□□□□ -0.98
SRRM1-213ENST00000485441 AGBL1Q96MI9 1066 aa8.91□□□□□ -0.98
SRRM1-213ENST00000485441 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.98
SRRM1-213ENST00000485441 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
SRRM1-213ENST00000485441 ARHGAP4P98171 946 aa8.9□□□□□ -0.98
SRRM1-213ENST00000485441 SF3B2Q13435 895 aaKnown RBP8.9□□□□□ -0.98
SRRM1-213ENST00000485441 SAP130Q9H0E3 1048 aa8.9□□□□□ -0.98
SRRM1-213ENST00000485441 TNFRSF10AO00220 468 aa8.89□□□□□ -0.99
SRRM1-213ENST00000485441 PSMA6P60900 246 aaKnown RBP8.89□□□□□ -0.99
SRRM1-213ENST00000485441 MTMR3Q13615 1198 aa8.89□□□□□ -0.99
SRRM1-213ENST00000485441 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
SRRM1-213ENST00000485441 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
SRRM1-213ENST00000485441 H3BRB1 525 aa8.88□□□□□ -0.99
SRRM1-213ENST00000485441 EML1O00423 815 aa8.88□□□□□ -0.99
SRRM1-213ENST00000485441 MARSP56192 900 aaKnown RBP8.88□□□□□ -0.99
SRRM1-213ENST00000485441 TLR1Q15399 786 aa8.88□□□□□ -0.99
SRRM1-213ENST00000485441 TEAD4Q15561 434 aa8.88□□□□□ -0.99
SRRM1-213ENST00000485441 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
SRRM1-213ENST00000485441 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
SRRM1-213ENST00000485441 TUT1Q9H6E5 874 aaKnown RBP8.88□□□□□ -0.99
SRRM1-213ENST00000485441 ERCC3P19447 782 aa8.87□□□□□ -0.99
SRRM1-213ENST00000485441 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
SRRM1-213ENST00000485441 COX20Q5RI15 118 aa8.87□□□□□ -0.99
SRRM1-213ENST00000485441 PPARGC1BQ86YN6 1023 aaKnown RBP8.87□□□□□ -0.99
SRRM1-213ENST00000485441 HPS1Q92902 700 aa8.87□□□□□ -0.99
SRRM1-213ENST00000485441 TNFRSF10BO14763 440 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 RELBQ01201 579 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms