RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
LRIF1-202ENST00000485275 DDB1Q16531 1140 aa18.84■□□□□ 0.61
LRIF1-202ENST00000485275 EXOC5O00471 708 aa18.83■□□□□ 0.61
LRIF1-202ENST00000485275 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.61
LRIF1-202ENST00000485275 BCAR3O75815 825 aa18.83■□□□□ 0.61
LRIF1-202ENST00000485275 HSP90AB1P08238 724 aaKnown RBP18.83■□□□□ 0.61
LRIF1-202ENST00000485275 RARSP54136 660 aaKnown RBP18.83■□□□□ 0.6
LRIF1-202ENST00000485275 MARCH10Q8NA82 808 aaPredicted RBP18.83■□□□□ 0.6
LRIF1-202ENST00000485275 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
LRIF1-202ENST00000485275 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
LRIF1-202ENST00000485275 UBR2Q8IWV8 1755 aa18.82■□□□□ 0.6
LRIF1-202ENST00000485275 BABAM1Q9NWV8 329 aa18.82■□□□□ 0.6
LRIF1-202ENST00000485275 C5P01031 1676 aa18.81■□□□□ 0.6
LRIF1-202ENST00000485275 BTBD11A6QL63 1104 aa18.81■□□□□ 0.6
LRIF1-202ENST00000485275 VAMP4O75379 141 aa18.81■□□□□ 0.6
LRIF1-202ENST00000485275 BCL2L13Q9BXK5 485 aa18.81■□□□□ 0.6
LRIF1-202ENST00000485275 RRP1P56182 461 aaKnown RBP18.81■□□□□ 0.6
LRIF1-202ENST00000485275 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
LRIF1-202ENST00000485275 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
LRIF1-202ENST00000485275 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
LRIF1-202ENST00000485275 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
LRIF1-202ENST00000485275 PLIN1O60240 522 aa18.79■□□□□ 0.6
LRIF1-202ENST00000485275 EIF4A1P60842 406 aaKnown RBP18.79■□□□□ 0.6
LRIF1-202ENST00000485275 IRX6P78412 446 aaPredicted RBP18.79■□□□□ 0.6
LRIF1-202ENST00000485275 ERVV-2B6SEH9 535 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 SSH1Q8WYL5 1049 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 HEG1Q9ULI3 1381 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 KCPQ6ZWJ8 1503 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 EP400Q96L91 3159 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 ONECUT3O60422 494 aaPredicted RBP18.78■□□□□ 0.6
LRIF1-202ENST00000485275 CABP4P57796 275 aa18.78■□□□□ 0.6
LRIF1-202ENST00000485275 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
LRIF1-202ENST00000485275 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
LRIF1-202ENST00000485275 RGS17Q9UGC6 210 aaPredicted RBP18.76■□□□□ 0.59
LRIF1-202ENST00000485275 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
LRIF1-202ENST00000485275 BCL9O00512 1426 aa18.76■□□□□ 0.59
LRIF1-202ENST00000485275 A0A0G2JS52 829 aa18.76■□□□□ 0.59
LRIF1-202ENST00000485275 MYT1Q01538 1121 aa18.76■□□□□ 0.59
LRIF1-202ENST00000485275 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
LRIF1-202ENST00000485275 C20orf194Q5TEA3 1177 aa18.74■□□□□ 0.59
LRIF1-202ENST00000485275 PIGBQ92521 554 aa18.74■□□□□ 0.59
LRIF1-202ENST00000485275 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
LRIF1-202ENST00000485275 SMC4Q9NTJ3 1288 aa18.73■□□□□ 0.59
LRIF1-202ENST00000485275 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
LRIF1-202ENST00000485275 FAM182BQ5T319 152 aa18.73■□□□□ 0.59
LRIF1-202ENST00000485275 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
LRIF1-202ENST00000485275 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
LRIF1-202ENST00000485275 LAMB4A4D0S4 1761 aa18.72■□□□□ 0.59
LRIF1-202ENST00000485275 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
LRIF1-202ENST00000485275 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
LRIF1-202ENST00000485275 TMOD3Q9NYL9 352 aa18.72■□□□□ 0.59
LRIF1-202ENST00000485275 SBF2Q86WG5 1849 aa18.72■□□□□ 0.59
LRIF1-202ENST00000485275 NHSQ6T4R5 1651 aa18.72■□□□□ 0.59
LRIF1-202ENST00000485275 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
LRIF1-202ENST00000485275 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
LRIF1-202ENST00000485275 ZNF428Q96B54 188 aa18.71■□□□□ 0.59
LRIF1-202ENST00000485275 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
LRIF1-202ENST00000485275 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
LRIF1-202ENST00000485275 FKBP8Q14318 412 aa18.7■□□□□ 0.58
LRIF1-202ENST00000485275 NECTIN2Q92692 538 aa18.7■□□□□ 0.58
LRIF1-202ENST00000485275 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
LRIF1-202ENST00000485275 KCNQ2O43526 872 aa18.69■□□□□ 0.58
LRIF1-202ENST00000485275 PTF1AQ7RTS3 328 aa18.69■□□□□ 0.58
LRIF1-202ENST00000485275 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
LRIF1-202ENST00000485275 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
LRIF1-202ENST00000485275 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
LRIF1-202ENST00000485275 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
LRIF1-202ENST00000485275 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
LRIF1-202ENST00000485275 RGS12O14924 1447 aa18.68■□□□□ 0.58
LRIF1-202ENST00000485275 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
LRIF1-202ENST00000485275 HOXB7P09629 217 aa18.68■□□□□ 0.58
LRIF1-202ENST00000485275 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
LRIF1-202ENST00000485275 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
LRIF1-202ENST00000485275 BTAF1O14981 1849 aa18.67■□□□□ 0.58
LRIF1-202ENST00000485275 TJP1Q07157 1748 aa18.67■□□□□ 0.58
LRIF1-202ENST00000485275 NOB1Q9ULX3 412 aaKnown RBP18.67■□□□□ 0.58
LRIF1-202ENST00000485275 RLBP1P12271 317 aa18.66■□□□□ 0.58
LRIF1-202ENST00000485275 HDGFL1Q5TGJ6 251 aa18.66■□□□□ 0.58
LRIF1-202ENST00000485275 NEFLP07196 543 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 TRIM27P14373 513 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
LRIF1-202ENST00000485275 EIF2S2P20042 333 aaKnown RBP18.65■□□□□ 0.58
LRIF1-202ENST00000485275 G2E3Q7L622 706 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 SLC4A9Q96Q91 983 aa18.65■□□□□ 0.58
LRIF1-202ENST00000485275 PANK1Q8TE04 598 aa18.64■□□□□ 0.57
LRIF1-202ENST00000485275 CHPF2Q9P2E5 772 aa18.64■□□□□ 0.57
LRIF1-202ENST00000485275 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
LRIF1-202ENST00000485275 ANXA1P04083 346 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
LRIF1-202ENST00000485275 ZKSCAN2Q63HK3 967 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
LRIF1-202ENST00000485275 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms