RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 GOLGA2Q08379 1002 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 NFE2L2Q16236 605 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 WDR78Q5VTH9 848 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 KIF12Q96FN5 646 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 ZNF512BQ96KM6 892 aaPredicted RBP7.92□□□□□ -1.14
KPNA1-208ENST00000485027 C8orf48Q96LL4 319 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 PRIMPOLQ96LW4 560 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 SFMBT1Q9UHJ3 866 aa7.92□□□□□ -1.14
KPNA1-208ENST00000485027 GRIN2BQ13224 1484 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 GAPVD1Q14C86 1478 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 MAGI1Q96QZ7 1491 aaPredicted RBP7.91□□□□□ -1.14
KPNA1-208ENST00000485027 SORBS3O60504 671 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 NCOA4Q13772 614 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 DHX8Q14562 1220 aaKnown RBP7.91□□□□□ -1.14
KPNA1-208ENST00000485027 TMC4Q7Z404 712 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
KPNA1-208ENST00000485027 VTI1BQ9UEU0 232 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 NRBP1Q9UHY1 535 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
KPNA1-208ENST00000485027 CFAP69A5D8W1 941 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 KIF3CO14782 793 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
KPNA1-208ENST00000485027 SERINC3Q13530 473 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 NR6A1Q15406 480 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 CAPN12Q6ZSI9 719 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 CXXC1Q9P0U4 656 aaPredicted RBP7.9□□□□□ -1.14
KPNA1-208ENST00000485027 EID1Q9Y6B2 187 aa7.9□□□□□ -1.14
KPNA1-208ENST00000485027 FMNL1O95466 1100 aaPredicted RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 MICALL2Q8IY33 904 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 ZNF594Q96JF6 807 aaPredicted RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 SETDB2Q96T68 719 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 MPHOSPH6Q99547 160 aaKnown RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 CHST12Q9NRB3 414 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 RIMBP3CA6NJZ7 1639 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 RIMBP3BA6NNM3 1639 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 RIMBP3Q9UFD9 1639 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 LDHAP00338 332 aaKnown RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 LDHBP07195 334 aaKnown RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 VIL1P09327 827 aaKnown RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 GNALP38405 381 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 KCNH2Q12809 1159 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 DPY19L2Q6NUT2 758 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 SECISBP2LQ93073 1101 aaKnown RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 KANSL2Q9H9L4 492 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 DDX41Q9UJV9 622 aaKnown RBP7.89□□□□□ -1.15
KPNA1-208ENST00000485027 CLASP1Q7Z460 1538 aa7.89□□□□□ -1.15
KPNA1-208ENST00000485027 TREHO43280 583 aa7.88□□□□□ -1.15
KPNA1-208ENST00000485027 LIG1P18858 919 aa7.88□□□□□ -1.15
KPNA1-208ENST00000485027 DAB2P98082 770 aa7.88□□□□□ -1.15
KPNA1-208ENST00000485027 RINLQ6ZS11 566 aa7.88□□□□□ -1.15
KPNA1-208ENST00000485027 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
KPNA1-208ENST00000485027 TYW1Q9NV66 732 aaKnown RBP7.88□□□□□ -1.15
KPNA1-208ENST00000485027 PCDHGC3Q9UN70 934 aa7.88□□□□□ -1.15
KPNA1-208ENST00000485027 SYNJ2O15056 1496 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 ERICH3Q5RHP9 1530 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 LGR5O75473 907 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 CLDN10P78369 228 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 FKBP4Q02790 459 aaKnown RBP eCLIP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 C1QBPQ07021 282 aaKnown RBP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 CHADLQ6NUI6 762 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 FERMT3Q86UX7 667 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 GEMIN8Q9NWZ8 242 aaKnown RBP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 SWAP70Q9UH65 585 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 PRKAB1Q9Y478 270 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 KAT6BQ8WYB5 2073 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 EPB41L2O43491 1005 aaKnown RBP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 PRPF40AO75400 957 aaKnown RBP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 WDR75Q8IWA0 830 aaKnown RBP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 CACTIN-AS1Q8N1I8 211 aa7.87□□□□□ -1.15
KPNA1-208ENST00000485027 PRPF38AQ8NAV1 312 aaKnown RBP7.87□□□□□ -1.15
KPNA1-208ENST00000485027 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.87□□□□□ -1.151e-8■■■■□ 22.3
KPNA1-208ENST00000485027 CFAP99D6REC4 459 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 MAPK8P45983 427 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 SYCP2LQ5T4T6 812 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 TTC39BQ5VTQ0 682 aaPredicted RBP7.86□□□□□ -1.15
KPNA1-208ENST00000485027 FRMD6Q96NE9 622 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 CCDC85AQ96PX6 553 aaPredicted RBP7.86□□□□□ -1.15
KPNA1-208ENST00000485027 EPAS1Q99814 870 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 MKNK1Q9BUB5 465 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 C12orf49Q9H741 205 aa7.86□□□□□ -1.15
KPNA1-208ENST00000485027 DDX11L8A8MPP1 907 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 ATP5J2-PTCD1G3V325 749 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 PPP1R12AO14974 1030 aaPredicted RBP7.85□□□□□ -1.15
KPNA1-208ENST00000485027 NEFMP07197 916 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 FBXO45P0C2W1 286 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 USP5P45974 858 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 GUCA2AQ02747 115 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 ZNF280DQ6N043 979 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 RBCK1Q9BYM8 510 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 ARHGEF11O15085 1522 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 PSMD2Q13200 908 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 SAFB2Q14151 953 aaKnown RBP eCLIP7.85□□□□□ -1.15
KPNA1-208ENST00000485027 CCSAPQ6IQ19 270 aaPredicted RBP7.85□□□□□ -1.15
KPNA1-208ENST00000485027 RNF135Q8IUD6 432 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 PGBD3Q8N328 593 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 HLA-CQ95604 372 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 ARPC5LQ9BPX5 153 aa7.85□□□□□ -1.15
KPNA1-208ENST00000485027 GRIN2AQ12879 1464 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms