RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 LY75O60449 1722 aa20.19■□□□□ 0.82
HLA-F-226ENST00000484704 ITGB4P16144 1822 aa20.19■□□□□ 0.82
HLA-F-226ENST00000484704 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-226ENST00000484704 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
HLA-F-226ENST00000484704 PIGBQ92521 554 aa20.18■□□□□ 0.82
HLA-F-226ENST00000484704 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
HLA-F-226ENST00000484704 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
HLA-F-226ENST00000484704 GRIN3BO60391 1043 aa20.17■□□□□ 0.82
HLA-F-226ENST00000484704 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
HLA-F-226ENST00000484704 KDRP35968 1356 aa20.17■□□□□ 0.82
HLA-F-226ENST00000484704 CABP4P57796 275 aa20.16■□□□□ 0.82
HLA-F-226ENST00000484704 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
HLA-F-226ENST00000484704 ERVV-2B6SEH9 535 aa20.15■□□□□ 0.82
HLA-F-226ENST00000484704 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
HLA-F-226ENST00000484704 WWC3Q9ULE0 1092 aa20.13■□□□□ 0.81
HLA-F-226ENST00000484704 CD2APQ9Y5K6 639 aa20.13■□□□□ 0.81
HLA-F-226ENST00000484704 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
HLA-F-226ENST00000484704 AKAP4Q5JQC9 854 aa20.12■□□□□ 0.81
HLA-F-226ENST00000484704 AK7Q96M32 723 aa20.11■□□□□ 0.81
HLA-F-226ENST00000484704 ASAP1Q9ULH1 1129 aa20.11■□□□□ 0.81
HLA-F-226ENST00000484704 LOC102724428A0A0B4J2F2 783 aa20.1■□□□□ 0.81
HLA-F-226ENST00000484704 PHF14O94880 888 aa20.1■□□□□ 0.81
HLA-F-226ENST00000484704 SIK1P57059 783 aa20.1■□□□□ 0.81
HLA-F-226ENST00000484704 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
HLA-F-226ENST00000484704 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
HLA-F-226ENST00000484704 COL3A1P02461 1466 aaPredicted RBP20.1■□□□□ 0.81
HLA-F-226ENST00000484704 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
HLA-F-226ENST00000484704 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
HLA-F-226ENST00000484704 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
HLA-F-226ENST00000484704 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
HLA-F-226ENST00000484704 C5P01031 1676 aa20.08■□□□□ 0.81
HLA-F-226ENST00000484704 MTHFSDQ2M296 383 aaKnown RBP20.08■□□□□ 0.81
HLA-F-226ENST00000484704 ZNF526Q8TF50 670 aaPredicted RBP20.08■□□□□ 0.81
HLA-F-226ENST00000484704 ATG3Q9NT62 314 aa20.08■□□□□ 0.81
HLA-F-226ENST00000484704 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.8
HLA-F-226ENST00000484704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
HLA-F-226ENST00000484704 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
HLA-F-226ENST00000484704 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
HLA-F-226ENST00000484704 NEFMP07197 916 aa20.05■□□□□ 0.8
HLA-F-226ENST00000484704 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
HLA-F-226ENST00000484704 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
HLA-F-226ENST00000484704 GPBP1L1Q9HC44 474 aaPredicted RBP20.05■□□□□ 0.8
HLA-F-226ENST00000484704 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
HLA-F-226ENST00000484704 RNMTO43148 476 aaKnown RBP20.03■□□□□ 0.8
HLA-F-226ENST00000484704 ITPK1Q13572 414 aa20.03■□□□□ 0.8
HLA-F-226ENST00000484704 RALBP1Q15311 655 aa20.03■□□□□ 0.8
HLA-F-226ENST00000484704 LGR6Q9HBX8 967 aa20.03■□□□□ 0.8
HLA-F-226ENST00000484704 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
HLA-F-226ENST00000484704 PTCD1O75127 700 aaKnown RBP20.02■□□□□ 0.8
HLA-F-226ENST00000484704 IFFO2Q5TF58 517 aa20.02■□□□□ 0.8
HLA-F-226ENST00000484704 SLC52A2Q9HAB3 445 aa20.02■□□□□ 0.8
HLA-F-226ENST00000484704 SCN11AQ9UI33 1791 aa20.02■□□□□ 0.8
HLA-F-226ENST00000484704 CEP350Q5VT06 3117 aa20.02■□□□□ 0.79
HLA-F-226ENST00000484704 GNAT3A8MTJ3 354 aa20.01■□□□□ 0.79
HLA-F-226ENST00000484704 TEFQ10587 303 aa20.01■□□□□ 0.79
HLA-F-226ENST00000484704 ADCY9O60503 1353 aa20■□□□□ 0.79
HLA-F-226ENST00000484704 GNPATO15228 680 aa20■□□□□ 0.79
HLA-F-226ENST00000484704 FCHSD2O94868 740 aa20■□□□□ 0.79
HLA-F-226ENST00000484704 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
HLA-F-226ENST00000484704 SSFA2P28290 1259 aa19.99■□□□□ 0.79
HLA-F-226ENST00000484704 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
HLA-F-226ENST00000484704 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
HLA-F-226ENST00000484704 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
HLA-F-226ENST00000484704 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
HLA-F-226ENST00000484704 HSPA6P17066 643 aa19.96■□□□□ 0.79
HLA-F-226ENST00000484704 PHACTR3Q96KR7 559 aa19.96■□□□□ 0.79
HLA-F-226ENST00000484704 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
HLA-F-226ENST00000484704 UBR3Q6ZT12 1888 aa19.95■□□□□ 0.78
HLA-F-226ENST00000484704 MMP10P09238 476 aa19.95■□□□□ 0.78
HLA-F-226ENST00000484704 SLC39A6Q13433 755 aa19.95■□□□□ 0.78
HLA-F-226ENST00000484704 MYBBP1AQ9BQG0 1328 aaKnown RBP19.95■□□□□ 0.78
HLA-F-226ENST00000484704 KIF3CO14782 793 aa19.94■□□□□ 0.78
HLA-F-226ENST00000484704 TRAPPC3LQ5T215 181 aa19.94■□□□□ 0.78
HLA-F-226ENST00000484704 SLC4A9Q96Q91 983 aa19.94■□□□□ 0.78
HLA-F-226ENST00000484704 CNTNAP4Q9C0A0 1308 aa19.93■□□□□ 0.78
HLA-F-226ENST00000484704 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
HLA-F-226ENST00000484704 MRC1P22897 1456 aa19.92■□□□□ 0.78
HLA-F-226ENST00000484704 A0A0G2JLW4 131 aa19.92■□□□□ 0.78
HLA-F-226ENST00000484704 RC3H1Q5TC82 1133 aaKnown RBP19.92■□□□□ 0.78
HLA-F-226ENST00000484704 IL17REQ8NFR9 667 aa19.92■□□□□ 0.78
HLA-F-226ENST00000484704 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
HLA-F-226ENST00000484704 RPS6KA4O75676 772 aa19.9■□□□□ 0.78
HLA-F-226ENST00000484704 RFC4P35249 363 aa19.9■□□□□ 0.78
HLA-F-226ENST00000484704 CRKLP46109 303 aaKnown RBP19.9■□□□□ 0.78
HLA-F-226ENST00000484704 BTBD11A6QL63 1104 aa19.89■□□□□ 0.77
HLA-F-226ENST00000484704 DNAJC10Q8IXB1 793 aa19.89■□□□□ 0.77
HLA-F-226ENST00000484704 ARHGEF1Q92888 912 aaKnown RBP19.89■□□□□ 0.77
HLA-F-226ENST00000484704 ADAMTS7Q9UKP4 1686 aa19.89■□□□□ 0.77
HLA-F-226ENST00000484704 BCS1LQ9Y276 419 aa19.89■□□□□ 0.77
HLA-F-226ENST00000484704 COL5A3P25940 1745 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-226ENST00000484704 ADRA2BP18089 450 aa19.88■□□□□ 0.77
HLA-F-226ENST00000484704 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
HLA-F-226ENST00000484704 MCM10Q7L590 875 aa19.88■□□□□ 0.77
HLA-F-226ENST00000484704 PXDNLA1KZ92 1463 aa19.87■□□□□ 0.77
HLA-F-226ENST00000484704 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
HLA-F-226ENST00000484704 HTATSF1O43719 755 aaKnown RBP19.87■□□□□ 0.77
HLA-F-226ENST00000484704 ZNF790Q6PG37 636 aa19.87■□□□□ 0.77
HLA-F-226ENST00000484704 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
HLA-F-226ENST00000484704 DPEP1P16444 411 aa19.86■□□□□ 0.77
HLA-F-226ENST00000484704 TGFB2P61812 414 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms